2,149 research outputs found

    Inferring kangaroo phylogeny from incongruent nuclear and mitochondrial genes

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    The marsupial genus Macropus includes three subgenera, the familiar large grazing kangaroos and wallaroos of M. (Macropus) and M. (Osphranter), as well as the smaller mixed grazing/browsing wallabies of M. (Notamacropus). A recent study of five concatenated nuclear genes recommended subsuming the predominantly browsing Wallabia bicolor (swamp wallaby) into Macropus. To further examine this proposal we sequenced partial mitochondrial genomes for kangaroos and wallabies. These sequences strongly favour the morphological placement of W. bicolor as sister to Macropus, although place M. irma (black-gloved wallaby) within M. (Osphranter) rather than as expected, with M. (Notamacropus). Species tree estimation from separately analysed mitochondrial and nuclear genes favours retaining Macropus and Wallabia as separate genera. A simulation study finds that incomplete lineage sorting among nuclear genes is a plausible explanation for incongruence with the mitochondrial placement of W. bicolor, while mitochondrial introgression from a wallaroo into M. irma is the deepest such event identified in marsupials. Similar such coalescent simulations for interpreting gene tree conflicts will increase in both relevance and statistical power as species-level phylogenetics enters the genomic age. Ecological considerations in turn, hint at a role for selection in accelerating the fixation of introgressed or incompletely sorted loci. More generally the inclusion of the mitochondrial sequences substantially enhanced phylogenetic resolution. However, we caution that the evolutionary dynamics that enhance mitochondria as speciation indicators in the presence of incomplete lineage sorting may also render them especially susceptible to introgression

    Intraindividual reaction time variability predicts prospective memory failures in older adults

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    This study investigated the relationship between intraindividual variability (IIV) in reaction time and prospective memory errors in older adults using data from the Zurich Longitudinal Study of Cognitive Aging (n = 336 individuals aged 66–81 years). The results indicated that increased IIV measured from independent tasks was associated with a greater proportion of prospective memory errors. These significant findings were not influenced by age and did not vary according to prospective memory cue type. Variability is thought to reflect fluctuations in attentional and executive control and these attentional processes may also impact on prospective memory through failure to detect the target cue. The findings suggest, therefore, that measures of variability may have some potential in the identification of older persons who are more vulnerable to everyday errors such as prospective memory failures

    Morphological and molecular evidence supports specific recognition of the recently extinct Bettongia anhydra (Marsupialia: Macropodidae)

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    In 1933, geologist and explorer Michael Terry collected the skull of a small macropodid captured by members of his party near Lake Mackay, western Northern Territory. In 1957, this skull was described as the sole exemplar of a distinct subspecies, Bettongia penicillata anhydra, but was later synonymized with B. lesueur and thereafter all but forgotten. We use a combination of craniodental morphology and ancient mitochondrial DNA to confirm that the Lake Mackay specimen is taxonomically distinct from all other species of Bettongia and recognize an additional specimen from a Western Australian Holocene fossil accumulation. B. anhydra is morphologically and genetically most similar to B. lesueur but differs in premolar shape, rostrum length, dentary proportions, and molar size gradient. In addition, it has a substantial mitochondrial cytochrome b pairwise distance of 9.6–12% relative to all other bettongs. The elevation of this recently extinct bettong to species status indicates that Australia’s mammal extinction record over the past 2 centuries is even worse than currently accepted. Like other bettongs, B. anhydra probably excavated much of its food and may have performed valuable ecological services that improved soil structure and water infiltration and retention, as well as playing an important role in the dispersal of seeds and mycorrhizal fungal spores. All extant species of Bettongia have experienced extensive range contractions since European colonization and some now persist only on island refugia. The near total loss of these ecosystem engineers from the Australian landscape has far-reaching ecological implications

    Cognitive function and oral health among ageing adults

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    Objectives: There is inconclusive evidence that cognitive function is associated with oral health in older adults. This study investigated the association between cognitive function and oral health among older adults in England. Methods: This longitudinal cohort study included 4416 dentate participants aged 50 years or older in the English Longitudinal Study of Ageing during 2002‐2014. Cognitive function was assessed at baseline in 2002/2003 using a battery of cognitive function tests. The self‐reported number of teeth remaining and self‐rated general oral health status was reported in 2014/2015. Ordinal logistic regression was applied to model the association between cognitive function at baseline and tooth loss or self‐rated oral health. Results: Cognitive function at baseline was negatively associated with the risk of tooth loss (per each 1 standard deviation lower in cognitive function score, OR: 1.13, 95% CI: 1.05‐1.21). When cognitive function score was categorized into quintiles, there was a clear gradient association between cognitive function and tooth loss (P‐trend = 0.003); people in the lowest quintile of cognitive function had higher risk of tooth loss than those in the highest quintile (OR: 1.39, 95% CI: 1.12‐1.74). A similar magnitude and direction of association were evident between cognitive function and self‐rated oral health. Conclusion: This longitudinal study in an English ageing population has demonstrated that poor cognitive function at early stage was associated with poorer oral health and higher risk of tooth loss in later life. The gradient relationship suggests that an improvement in cognitive function could potentially improve oral health and reduce the risk of tooth loss in the ageing population

    Longitudinally Polarized Photoproduction of Inclusive Hadrons Beyond the Leading Order

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    We present a complete next-to-leading order QCD calculation for single-inclusive large-pT hadron production in longitudinally polarized lepton-nucleon collisions, consistently including ``direct'' and ``resolved'' photon contributions. This process could be studied experimentally at a future polarized lepton-proton collider like eRHIC at BNL. We examine the sensitivity of such measurements to the so far completely unknown parton content of circularly polarized photons.Comment: 15 pages, 7 eps figure

    Currents associated with Saturn's intra-D ring azimuthal field perturbations

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    During the final 22 full revolutions of the Cassini mission in 2017, the spacecraft passed at periapsis near the noon meridian through the gap between the inner edge of Saturn’s D ring and the denser layers of the planet’s atmosphere, revealing the presence of an unanticipated low-latitude current system via the associated azimuthal perturbation field peaking typically at ~10-30 nT. Assuming approximate axisymmetry, here we use the field data to calculate the associated horizontal meridional currents flowing in the ionosphere at the feet of the field lines traversed, together with the exterior field-aligned currents required by current continuity. We show that the ionospheric currents are typically~0.5–1.5 MA per radian of azimuth, similar to auroral region currents, while the field-aligned current densities above the ionosphere are typically ~5-10 nA m-2 , more than an order less than auroral values. The principal factor involved in this difference is the ionospheric areas into which the currents map. While around a third of passes exhibit unidirectional currents flowing northward in the ionosphere closing southward along exterior field lines, many passes also display layers of reversed northward field-aligned current of comparable or larger magnitude in the region interior to the D ring, which may reverse sign again on the innermost field lines traversed. Overall, however, the currents generally show a high degree of north-south conjugacy indicative of an interhemispheric system, certainly on the larger overall spatial scales involved, if less so for the smaller-scale structures, possibly due to rapid temporal or local time variations
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