Mitochondrial physiology

As the knowledge base and importance of mitochondrial physiology to evolution, health and disease expands, the necessity for harmonizing the terminology concerning mitochondrial respiratory states and rates has become increasingly apparent. The chemiosmotic theory establishes the mechanism of energy transformation and coupling in oxidative phosphorylation. The unifying concept of the protonmotive force provides the framework for developing a consistent theoretical foundation of mitochondrial physiology and bioenergetics. We follow the latest SI guidelines and those of the International Union of Pure and Applied Chemistry (IUPAC) on terminology in physical chemistry, extended by considerations of open systems and thermodynamics of irreversible processes. The concept-driven constructive terminology incorporates the meaning of each quantity and aligns concepts and symbols with the nomenclature of classical bioenergetics. We endeavour to provide a balanced view of mitochondrial respiratory control and a critical discussion on reporting data of mitochondrial respiration in terms of metabolic flows and fluxes. Uniform standards for evaluation of respiratory states and rates will ultimately contribute to reproducibility between laboratories and thus support the development of data repositories of mitochondrial respiratory function in species, tissues, and cells. Clarity of concept and consistency of nomenclature facilitate effective transdisciplinary communication, education, and ultimately further discovery

Butia capitata (Mart.) Becc. lamina anatomy as a tool for taxonomic distinction from B. odorata (Barb. Rodr.) Noblick comb. nov (Arecaceae)

The distinction between Butia capitata and B. odorata is based only on a few morphological characteristics, therefore there is a need for additional studies for supporting the separation of the species. As lamina anatomy characteristics are relevant in circumscribing Arecaceae taxa, this work aimed to describe B. capitata lamina anatomy and compare it with B. odorata. Samples from the middle portion of the pinnae were collected and processed in accordance with standard plant anatomy techniques. The epidermis is uniseriate and composed of a thick cuticle and epicuticular waxes into like hooked filaments. The subsidiary cells that arch over the guard cells are located at the hypodermis. The mesophyll is isobilateral and compact. The vascular bundles are collateral with a sclerenchymatic sheath extension that reaches the hypodermis. The stegmata cells have spherical and druse-like silica bodies. The midrib faces the adaxial surface with a thick fibrous layer surrounding the vascular bundles adjacent to the chlorenchyma. The stratified expansion tissue is on the abaxial surface, within the boundary between the mesophyll and midrib. Raphides are only found in B. capitata. Small bundles of the midrib fully surround the fibrous cylinder only in B. odorata. These characteristics are diagnostic and useful for supporting the proposed separation

Diagnostic and prognostic characteristics of phytotoxicity caused by fluoride on Spondias dulcis Forst. F. (Anacardiaceae)

The goal of this study was to determine the symptoms and microscopic damage caused by fluoride on Spondias dulcis, a fluoride-sensitive species. The plants were exposed to simulated fog with fluoride (0, 5, 10, 15 and 20 mg L-1) for 20 min daily during four consecutive days. Samples from leaflets without any apparent fluoride injury were collected to microscopic analysis. The percentage of necrosed leaf area was measured, and the level of pollutant in the dry matter from the basal and apical portions of the plant was determined. The necroses began 24 h after the first simulation mainly from the base of the leaflets. A higher level of necrosis was observed at the apical portion of the plants, a region of higher fluoride accumulation. The damage on the surface of the leaflets was characterized as plasmolysis, erosion of the epicuticular waxes and epidermal rupture. Structurally, the noticeable accumulation of granules and droplets green stained by toluidine blue in the spongy parenchima and the boundaries of ending veinlets was observed. The limb thickness reduction occurred due to plasmolysis in the mesophyll, showing an apparent correlation with the damage observed on the surface. The parameters observed in the laboratory are promising for field biomonitoring studies

Phenotypic plasticity of Neonotonia wightii and Pueraria phaseoloides grown under different light intensities

Plants have the ability to undergo morphophysiological changes based on availability of light. The present study evaluated biomass accumulation, leaf morphoanatomy and physiology of Neonotonia wightii and Pueraria phaseoloides grown in full sunlight, as well as in 30% and 50% shade. Two assays were performed, one for each species, using a randomized block design with 10 replicates. A higher accumulation of fresh mass in the shoot of the plants was observed for both species under cultivation in 50% shade, while no differences were detected between the full sunlight and 30% shade. N. wightii and P. phaseoloides showed increase in area and reduction in thickness leaf when cultivated in 50% shade. There were no changes in photosynthetic rate, stomatal conductance, water use efficiency and evapotranspiration of P. phaseoloides plants because growth environment. However, the shade treatments caused alterations in physiological parameters of N. wightii. In both species, structural changes in the mesophyll occurred depending on the availability of light; however, the amount of leaf blade tissue remained unaltered. Despite the influence of light intensity variation on the morphophysiological plasticity of N. wightii and P. phaseoloides, no effects on biomass accumulation were observed in response to light

A simple and easy method to measure ammonia volatilization: Accuracy under field conditions

Field studies on soil ammonia (NH3) volatilization are restricted in many countries owing to the high costs commonly demanded for accurate quantification. We assessed the accuracy of a simple, open chamber design to capture NH3 under field conditions, as affected by different chamber placement schemes. Urea-15N was surface applied to lysimeters installed in the spaces between maize rows. Open chambers made from plastic bottles were installed on each lysimeter with variations in i) N rates (3, 8, 13, and 18 g m–2), ii) the height of the chamber above the soil surface (0, 5, and 10 mm), and iii) chamber relocation (static vs. dynamic). Reference lysimeters without chambers were used to measure NH3 losses by 15N-balance. Losses of NH3 -N accounted for more than 50% of the applied N. Relocation of the chambers had no impact on their NH3-trapping efficiencies, proving to be an unnecessary procedure. Variation in the height of the chambers above the soil surface affected the capture of NH3, but the results still maintained high linearity with the NH3 losses quantified by the reference method (R2 > 0.98). When the same placement scheme used in the introductory study describing the chamber was utilized (static and touching the soil surface), we found a trapping efficiency of 60%, which was very similar to that (57%) obtained in the previous study. Our results show that this simple, open chamber design can be used with satisfactory accuracy under field conditions, provided that simple, standardized procedures are warranted

Optimizing the use of open chambers to measure ammonia volatilization in field plots amended with urea

Measuring ammonia (NH3) volatilization from urea-fertilized soils is crucial for evaluation of practices that reduce gaseous nitrogen (N) losses in agriculture. The small area of chambers used for NH3 volatilization measurements compared with the size of field plots may cause significant errors if inadequate sampling strategies are adopted. Our aims were: i) to investigate the effect of using multiple open chambers on the variability in the measurement of NH3 volatilization in urea-amended field plots and ii) to define the critical period of NH3-N losses during which the concentration of sampling effort is capable of reducing uncertainty. The use of only one chamber covering 0.015% of the plot (51.84 m2) generates a value of NH3-N loss within an expected margin of error of 30% around the true mean. To reduce the error margin by half (15%), 3–7 chambers were required with a mean of 5 chambers per plot. Concentrating the sampling efforts in the first two weeks after urea application, which is usually the most critical period of N losses and associated errors, represents an efficient strategy to lessen uncertainty in the measurements of NH3 volatilization. This strategy enhances the power of detection of NH3-N loss abatement in field experiments using chambers

Utilização de parâmetros morfoanatômicos na análise da fitotoxidez do flúor em folhas de Magnolia ovata (A. St.-Hil.) Spreng. (Magnoliaceae) Use of morphoanatomic parameters in the analysis of fluoride toxicity in leaves of Magnolia ovata (A. St.-Hil.) Spreng. (Magnoliaceae)

Com os objetivos de avaliar o grau de suscetibilidade e caracterizar as injúrias na morfoanatomia de folhas de Magnolia ovata, mudas foram submetidas à chuva simulada com flúor (10 &micro;g.ml-1 de F-) por 10 dias consecutivos. No tratamento controle, utilizou-se apenas água deionizada. Folhas foram coletadas para quantificação de flúor na matéria seca e fixadas para análises em microscopia de luz e eletrônica de varredura. As folhas apicais apresentaram pequena porcentagem de necroses intervenais e marginais em uma ou ambas as faces e maior acúmulo de flúor, em relação ao controle, quando comparadas com as folhas da porção basal. A análise micromorfológica das folhas aparentemente sadias indicou alterações nas paredes periclinais externas da epiderme e formação de concavidades, além de cristas estomáticas danificadas, erosão de ceras epicuticulares e presença de esporos e hifas de fungos. A caracterização estrutural das injúrias evidenciou retração de protoplasto das células epidérmicas, colapso das células do mesofilo e da epiderme e acúmulo de compostos fenólicos em células das regiões necrosadas. As alterações micromorfológicas das folhas ocorreram antes que sintomas fossem observados, o que comprova a importância da micromorfologia na diagnose precoce da injúria. As plantas de M. ovata apresentaram poucos sintomas visuais em resposta ao flúor, entretanto as alterações morfoanatômicas indicam que essa espécie possui potencial para ser utilizada como bioindicadora.<br>This work aimed to evaluate the degree of susceptibility and characterize the injuries caused by fluoride in the morphoanatomy of Magnolia ovata. Seedlings were subjected to fluoride simulated rain (10 &micro;g.ml-1 of F-) during 10 consecutive days. In the control treatment, only deionized water was used. Leaves were collected for quantification of fluoride in the dry weight and fixed for light and scanning electron microscopy analyses. The apical leaves presented a small percentage of interveinal and margin necrosis in one or both leaf surfaces and greater fluoride accumulation, in relation to the control, than the basal portion leaves. Micromorphological analyses indicated that the areas apparently healthy of epidermis presented alterations in the external periclinal walls and formation of concave shapes, beyond damaged stomatic ledge, erosion of epicuticular waxes and presence of spores and fungal hyphae. The structural characterization of the injuries showed retraction of the protoplast of the epidermal cells, collapse of the mesophyll and epidermal cells and accumulation of phenolic compounds in cells of the necrotic regions. The micromorphological variations occurred before leaf symptoms, confirming the importance of micromorphology in early diagnosis of the injury. Plants of M. ovata presented few visible symptoms in response to fluoride; however, morphoanatomic responses suggest that this species possesses potential features to be used as a bioindicator