8 research outputs found

    Deep RNA Sequencing of the Skeletal Muscle Transcriptome in Swimming Fish

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    Deep RNA sequencing (RNA-seq) was performed to provide an in-depth view of the transcriptome of red and white skeletal muscle of exercised and non-exercised rainbow trout (Oncorhynchus mykiss) with the specific objective to identify expressed genes and quantify the transcriptomic effects of swimming-induced exercise. Pubertal autumn-spawning seawater-raised female rainbow trout were rested (n = 10) or swum (n = 10) for 1176 km at 0.75 body-lengths per second in a 6,000-L swim-flume under reproductive conditions for 40 days. Red and white muscle RNA of exercised and non-exercised fish (4 lanes) was sequenced and resulted in 15–17 million reads per lane that, after de novo assembly, yielded 149,159 red and 118,572 white muscle contigs. Most contigs were annotated using an iterative homology search strategy against salmonid ESTs, the zebrafish Danio rerio genome and general Metazoan genes. When selecting for large contigs (>500 nucleotides), a number of novel rainbow trout gene sequences were identified in this study: 1,085 and 1,228 novel gene sequences for red and white muscle, respectively, which included a number of important molecules for skeletal muscle function. Transcriptomic analysis revealed that sustained swimming increased transcriptional activity in skeletal muscle and specifically an up-regulation of genes involved in muscle growth and developmental processes in white muscle. The unique collection of transcripts will contribute to our understanding of red and white muscle physiology, specifically during the long-term reproductive migration of salmonids

    Schooling reduces energy consumption in swimming male European eels, Anguilla anguilla L.

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    During migration, swimming in schools provides fish with a number of behavioural and ecological advantages, including increased food supply and reduced predation risk. Previous work shows that carangiform and tunniform swimming result in energetic advantages for individuals using a diamond swimming formation. However, little is known about the potential energetic advantage associated with schooling for anguilliform fish, such as European eel. European eels migrate over a long distance to their spawning area in the Sargasso Sea and may experience energetic advantages when swimming in schools. In this study the effect of group-wise swimming on the cost of transport was tested. In addition, the swimming pattern of eels swimming in groups was studied. Male silver eels were individually subjected to an increased velocity test (0.4–0.9 m s- 1) with increments of 0.1 m s- 1 every 2 h. Groups comprising of seven males were swum following the same protocol. Video recordings were obtained to analyse tail beat frequency at the various water speeds. At all swimming speeds the oxygen consumption was significantly lower in group-wise vs. individually swimming males. The cost of transport at the optimal swimming speed of group-wise swimming males was significantly lower than that of the individually swimming males (21.3 ± 3.2 vs. 32.0 ± 0.6 mg O2 kg- 1 h- 1, respectively). The optimal swimming speeds, however, were not significantly different (0.57 ± 0.02 and 0.52 ± 0.04 m s- 1 respectively). At speeds of 0.50 m s- 1 and above, tail beat frequency was lower in males swimming in groups than in males swimming individually (2.6 ± 0.1 and 3.8 ± 0.1, respectively). In contrast to the ‘diamond’ shape pattern of many group-wise swimming fish, eels tend to swim in a synchronized fashion parallel to each other, possibly reducing swimming costs by Karman gaiting. Although not an evidence, the present study provides support for the assumption of group migration in European eels

    Changes in ovarian gene expression profiles and plasma hormone levels in maturing European eel (Anguilla anguilla); Biomarkers for broodstock selection.

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    Complete sexual maturation of European eels (Anguilla anguilla) in captivity can only be achieved via injections with gonadotropins. For female eels this procedure takes 4-6months and the response ranges from "unresponsive" to final maturation and ovulation. Reproductive success could be significantly increased via early selection of responders based on predictive markers and minimally invasive sampling methods. To get a better understanding of the genetic background of ovarian maturation of the European eel we performed a pilot deep-sequencing transcriptome analysis of ovarian tissue derived from a yellow eel, a prepubertal silver eel and a post-spawning matured eel. Two key players in steroidogenesis were strongly correlated with advanced sexual maturation, namely P450c17 and liver receptor homolog-1, suggesting that blood plasma steroids might qualify as minimally invasive markers for early detection of responders. Since the predictive value of plasma sex steroid levels for final maturation of the European eel had not yet been carefully examined, we performed an extensive artificial maturation trial. Farmed silver eels were treated with pituitary extracts and sampled at multiple time intervals. Expression of steroidogenesis-related genes in ovarian tissue of responding and non-responding eels after four weekly injections with pituitary extract was compared using a custom-built microarray and RNAseq. Increased expression of 17β-hsd1 was strongly linked to sexual maturation. Blood plasma levels of sex steroids were measured using ELISAs. We show that a 2.5-fold increase in blood-plasma estradiol level after 4 weekly pituitary extract injections is a strong predictor of final sexual maturation of female European eel.Animal science
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