Atmospheric trace metal deposition from natural and anthropogenic sources in Western Australia

Aerosols from Western Australia supply micronutrient trace elements including Fe into the western shelf of Australia and further afield into the Southern and Indian Oceans. However, regional observations of atmospheric trace metal deposition are limited. Here, we applied a series of leaching experiments followed by total analysis of bulk aerosol samples to a unique time-series of aerosol samples collected in Western Australia to determine atmospheric concentrations and solubilities of Fe and V, Mn, Co, Zn, and Pb. Positive matrix factorisation analysis indicated that mineral dust, biomass burning particulates, sea salt, and industrial emissions were the major types of aerosols. Overall, natural sources dominated Fe deposition. Higher atmospheric concentrations of mineral dust (sixfold) and biomass burning emissions were observed in warmer compared to cooler months. The fraction of labile Fe (0.6–6.0%) was lower than that reported for other regions of Australia. Bushfire emissions are a temporary source of labile Fe and may cause a peak in the delivery of its more easily available forms to the ocean. Increased labile Fe deposition may result in higher ocean productivity in regions where Fe is limiting, and the effect of aerosol deposition on ocean productivity in this region requires further study

The role of bacterial and algal exopolymeric substances in iron chemistry

© 2015 Elsevier B.V. It is widely accepted that the complexation of iron (Fe) with organic compounds is the primary factor that regulates Fe reactivity and its bioavailability to phytoplankton in the open ocean. Despite considerable efforts to unravel the provenance of the many organic ligands present in the 'ligand soup' and their contribution to Fe chemistry, much of this pool remains largely unresolved. Bacteria and phytoplankton are known to release exopolymeric substances (EPS) for a variety of functions and it is known that this material has metal binding properties. However, the contribution that bacterial and algal EPS makes to Fe biogeochemistry is not well documented. This study revealed that both bacterial and algal EPS contain functional components known to bind Fe (uronic acid, saccharides) and details the molecular weight distribution of the EPS. It is also demonstrated that components of the EPS have a high affinity for Fe-binding, in some cases similar to that of bacterial siderophores (~KFe'L 1012) and that this material greatly enhances Fe solubility (and, possibly, Fe oxyhydroxide reactivity via prevention of aggregation) in seawater. However, EPS may also accelerate Fe(II) oxidation and thus Fe(II) removal from the system. Our findings indicate that, in remote ocean regions, bacterial and algal EPS could play a significant role in the biogeochemical cycling of Fe and their contribution should be considered to further our understanding of the dynamics of Fe-limited oceans

The interplay between regeneration and scavenging fluxes drives ocean iron cycling

Despite recent advances in observational data coverage, quantitative constraints on how different physical and biogeochemical processes shape dissolved iron distributions remain elusive, lowering confidence in future projections for iron-limited regions. Here we show that dissolved iron is cycled rapidly in Pacific mode and intermediate water and accumulates at a rate controlled by the strongly opposing fluxes of regeneration and scavenging. Combining new data sets within a watermass framework shows that the multidecadal dissolved iron accumulation is much lower than expected from a meta-analysis of iron regeneration fluxes. This mismatch can only be reconciled by invoking significant rates of iron removal to balance iron regeneration, which imply generation of authigenic particulate iron pools. Consequently, rapid internal cycling of iron, rather than its physical transport, is the main control on observed iron stocks within intermediate waters globally and upper ocean iron limitation will be strongly sensitive to subtle changes to the internal cycling balance

Nature of protein family signatures: Insights from singular value analysis of position-specific scoring matrices

Position-specific scoring matrices (PSSMs) are useful for detecting weak homology in protein sequence analysis, and they are thought to contain some essential signatures of the protein families. In order to elucidate what kind of ingredients constitute such family-specific signatures, we apply singular value decomposition to a set of PSSMs and examine the properties of dominant right and left singular vectors. The first right singular vectors were correlated with various amino acid indices including relative mutability, amino acid composition in protein interior, hydropathy, or turn propensity, depending on proteins. A significant correlation between the first left singular vector and a measure of site conservation was observed. It is shown that the contribution of the first singular component to the PSSMs act to disfavor potentially but falsely functionally important residues at conserved sites. The second right singular vectors were highly correlated with hydrophobicity scales, and the corresponding left singular vectors with contact numbers of protein structures. It is suggested that sequence alignment with a PSSM is essentially equivalent to threading supplemented with functional information. The presented method may be used to separate functionally important sites from structurally important ones, and thus it may be a useful tool for predicting protein functions.Comment: 22 pages, 7 figures, 4 table

Dissolved iron in the Bermuda region of the subtropical North Atlantic Ocean: Seasonal dynamics, mesoscale variability, and physicochemical speciation

18 months embargo minus one day to account for leap year