Estimating the Prevalence of a True Oligometastatic Disease.

To delineate a patient group with few distant metastases that could possibly benefit from a curative therapeutic strategy employing a local approach, the term oligometastatic disease (OMD) was introduced into the clinical practice almost 30 years ago [...]

Exoplanet atmospheres with GIANO II. Detection of molecular absorption in the dayside spectrum of HD 102195b

The study of exoplanetary atmospheres is key to understand the differences between their physical, chemical and dynamical processes. Up to now, the bulk of atmospheric characterization analysis has been conducted on transiting planets. On some sufficiently bright targets, high-resolution spectroscopy (HRS) has also been successfully tested for non-transiting planets. We study the dayside of the non-transiting planet HD 102195b using the GIANO spectrograph mounted at TNG, demonstrating the feasibility of atmospheric characterization measurements and molecular detection for non-transiting planets with the HRS technique using 4-m class telescopes. The Doppler-shifted planetary signal changes on the order of many km/s during the observations, in contrast with the telluric absorption which is stationary in wavelength, allowing us to remove the contamination from telluric lines while preserving the features of the planetary spectrum. The emission signal from HD 102195b's atmosphere is then extracted by cross-correlating the residual spectra with atmospheric models. We detect molecular absorption from water vapor at 4.4$\sigma$ level. We also find convincing evidence for the presence of methane, which is detected at the 4.1$\sigma$ level. The two molecules are detected with a combined significance of 5.3$\sigma$, at a semi-amplitude of the planet radial velocity $K_P=128\pm 6$ km/s. We estimate a planet true mass of $M_P=0.46\pm 0.03~M_J$ and orbital inclination between 72.5 and 84.79$^{\circ}$ (1$\sigma$). Our analysis indicates a non-inverted atmosphere for HD 102195b, as expected given the relatively low temperature of the planet, inefficient to keep TiO/VO in gas phase. Moreover, a comparison with theoretical expectations and chemical model predictions corroborates our methane detection and suggests that the detected $CH_4$ and $H_2O$ signatures could be consistent with a low C/O ratio.Comment: 12 pages, 12 figures, accepted for publication in A&

Exoplanet atmospheres with GIANO. I. Water in the transmission spectrum of HD 189733b

High-resolution spectroscopy (R $\ge$ 20,000) at near-infrared wavelengths can be used to investigate the composition, structure, and circulation patterns of exoplanet atmospheres. However, up to now it has been the exclusive dominion of the biggest telescope facilities on the ground, due to the large amount of photons necessary to measure a signal in high-dispersion spectra. Here we show that spectrographs with a novel design - in particular a large spectral range - can open exoplanet characterisation to smaller telescope facilities too. We aim to demonstrate the concept on a series of spectra of the exoplanet HD 189733 b taken at the Telescopio Nazionale Galileo with the near-infrared spectrograph GIANO during two transits of the planet. In contrast to absorption in the Earth's atmosphere (telluric absorption), the planet transmission spectrum shifts in radial velocity during transit due to the changing orbital motion of the planet. This allows us to remove the telluric spectrum while preserving the signal of the exoplanet. The latter is then extracted by cross-correlating the residual spectra with template models of the planet atmosphere computed through line-by-line radiative transfer calculations, and containing molecular absorption lines from water and methane. By combining the signal of many thousands of planet molecular lines, we confirm the presence of water vapour in the atmosphere of HD 189733 b at the 5.5-$\sigma$ level. This signal was measured only in the first of the two observing nights. By injecting and retrieving artificial signals, we show that the non-detection on the second night is likely due to an inferior quality of the data. The measured strength of the planet transmission spectrum is fully consistent with past CRIRES observations at the VLT, excluding a strong variability in the depth of molecular absorption lines.Comment: 10 pages, 8 figures. Accepted for publication in Astronomy & Astrophysics. v2 includes language editin

On the bend number of circular-arc graphs as edge intersection graphs of paths on a grid

Golumbic, Lipshteyn and Stern \cite{Golumbic-epg} proved that every graph can be represented as the edge intersection graph of paths on a grid (EPG graph), i.e., one can associate with each vertex of the graph a nontrivial path on a rectangular grid such that two vertices are adjacent if and only if the corresponding paths share at least one edge of the grid. For a nonnegative integer $k$, $B_k$-EPG graphs are defined as EPG graphs admitting a model in which each path has at most $k$ bends. Circular-arc graphs are intersection graphs of open arcs of a circle. It is easy to see that every circular-arc graph is a $B_4$-EPG graph, by embedding the circle into a rectangle of the grid. In this paper, we prove that every circular-arc graph is $B_3$-EPG, and that there exist circular-arc graphs which are not $B_2$-EPG. If we restrict ourselves to rectangular representations (i.e., the union of the paths used in the model is contained in a rectangle of the grid), we obtain EPR (edge intersection of path in a rectangle) representations. We may define $B_k$-EPR graphs, $k\geq 0$, the same way as $B_k$-EPG graphs. Circular-arc graphs are clearly $B_4$-EPR graphs and we will show that there exist circular-arc graphs that are not $B_3$-EPR graphs. We also show that normal circular-arc graphs are $B_2$-EPR graphs and that there exist normal circular-arc graphs that are not $B_1$-EPR graphs. Finally, we characterize $B_1$-EPR graphs by a family of minimal forbidden induced subgraphs, and show that they form a subclass of normal Helly circular-arc graphs

Self-Injurious Behaviour in SCA17: A New Clinical Observation

Background: Self-injurious behaviour has historically been associated with borderline personality disorder. Nevertheless, over recent years, it has been reported in numerous neurological syndromes, especially hyperkinesias. Case report: Two cases of SCA17 manifested self-injurious behaviour, namely repetitive scratching of the skin resulting in severe excoriations. In one of them, the abnormal behaviour was associated with the inability to resist the impulse to commit the act along with relief following the damage. Discussion: This is the first report describing self-injurious behaviour in SCA17, but the mechanisms underlying it are still not clear. Further studies are needed to clarify the pathophysiology of such manifestation in hyperkinetic syndromes

Limits on the use of cobalt sulfide as anode of p-type dye-sensitized solar cells

Thin films of cobalt sulfide (CoS) of thickness l < 10m have been employed as anodes of p-type dye-sensitized solar cells (p-DSCs) when P1-sensitized nickel oxide (NiO) was the photoactive cathode and /I - constituted the redox mediator. In the role of counter electrode for p-DSCs, CoS was preferred over traditional platinized fluorine-doped indium oxide (Pt-FTO) due to the lower cost of the starting materials (Co salts) and the easier procedure of deposition onto large area substrates. The latter process was carried out via direct precipitation of CoS from aqueous solutions. The photoconversion efficiency (η) of the corresponding device was 0.07%. This value is about 35% less than the efficiency that is obtained with the analogous p-DSC employing the Pt-FTO anode (η = 0.11). Unlike p-DSCs based on Pt-FTO anodes, the photoelectrochemical cells employing CoS electrodes showed that this anodic material was not able to sustain the photocurrent densities generated by P1-sensitized NiO at a given photopotential. Illumination of the p-DSCs with CoS anodes and P1-sensitized NiO cathodes actually induced the reverse bias of the photoelectrochemical cell with CoS behaving like a p-type semiconductor with no degeneracy. © 2017 IOP Publishing Ltd

Molecular Investigations of PenA-mediated β-lactam Resistance in Burkholderia pseudomallei

Burkholderia pseudomallei is the etiological agent of melioidosis. Because of the bacterium’s intrinsic resistance and propensity to establish latent infections, melioidosis therapy is complicated and prolonged. Newer generation β-lactams, specifically ceftazidime, are used for acute phase therapy, but resistance to this cephalosporin has been observed. The chromosomally encoded penA gene encodes a putative twin arginine translocase (TAT)-secreted β-lactamase, and penA mutations have been implicated in ceftazidime resistance in clinical isolates. However, the role of PenA in resistance has not yet been systematically studied in isogenetic B. pseudomallei mutant backgrounds. We investigated the effects of penA deletion, point mutations, and up-regulation, as well as tat operon deletion and PenA TAT-signal sequence mutations. These experiments were made possible by employing a B. pseudomallei strain that is excluded from Select Agent regulations. Deletion of penA significantly (>4-fold) reduced the susceptibility to six of the nine β-lactams tested and ≥16-fold for ampicillin, amoxicillin, and carbenicillin. Overexpression of penA by single-copy, chromosomal expression of the gene under control of the inducible Ptac promoter, increased resistance levels for all β-lactams tested 2- to 10-fold. Recreation of the C69Y and P167S PenA amino acid substitutions previously observed in resistant clinical isolates increased resistance to ceftazidime by ≥85- and 5- to 8-fold, respectively. Similarly, a S72F substitution resulted in a 4-fold increase in resistance to amoxicillin and clavulanic acid. Susceptibility assays with PenA TAT-signal sequence and ΔtatABC mutants, as well as Western blot analysis, confirmed that PenA is a TAT secreted enzyme and not periplasmic but associated with the spheroplastic cell fraction. Lastly, we determined that two LysR-family regulators encoded by genes adjacent to penA do not play a role in transcriptional regulation of penA expression

Modelling solar-like variability for the detection of Earth-like planetary transits. II. Performance of the three-spot modelling, harmonic function fitting, iterative nonlinear filtering, and sliding boxcar filtering

Copyright © The European Southern Observatory (ESO)Aims. As an extension of a previous work, we present a comparison of four methods of filtering solar-like variability to increase the efficiency of detection of Earth-like planetary transits by means of box-shaped transit finder algorithms. Two of these filtering methods are the harmonic fitting method and the iterative nonlinear filter that, coupled respectively with the box least-square (BLS) and box maximum likelihood algorithms, demonstrated the best performance during the first detection blind test organised inside the CoRoT consortium. The third method, the 3-spot model, is a simplified physical model of Sun-like variability and the fourth is a simple sliding boxcar filter. Methods. We apply a Monte Carlo approach by simulating a large number of 150-day light curves (as for CoRoT long runs) for different planetary radii, orbital periods, epochs of the first transit, and standard deviations of the photon shot noise. Stellar variability is given by the total solar irradiance variations as observed close to the maximum of solar cycle 23. After filtering solar variability, transits are searched for by means of the BLS algorithm. Results. We find that the iterative nonlinear filter is the best method for filtering light curves of solar-like stars when a suitable window can be chosen. As the performance of this filter depends critically on the length of its window, we point out that the window must be as long as possible, according to the magnetic activity level of the star. We show an automatic method to choose the extension of the filter window from the power spectrum of the light curves. Conclusions. The iterative nonlinear filter, when used with a suitable choice of its window, has a better performance than more complicated and computationally intensive methods of fitting solar-like variability, like the 200-harmonic fitting or the 3-spot model