Draft genome sequence of Agrobacterium deltaense strain CNPSo 3391, isolated from a soybean nodule in Mozambique

Open Access Article; Published online: 7 March 2019Agrobacterium deltaense strain CNPSo 3391 was isolated from a soybean nodule in Mozambique. Its genome size was estimated at 4,926,588 bp. This isolate carries several coding sequences for stress tolerance, but no identifiable nodulation or virulence genes. Possible ecological roles of bacteria isolated from legume nodules and closely related to Agrobacterium are discussed

First report of soybean witchesbroom disease caused by Group 16SrII phytoplasma in soybean in Malawi and Mozambique

Soybean (Glycine max L.) is an important grain legume cultivated on approximately 1.24 million ha in Africa (1). Malawi ranks fourth in area of production in Africa, with 75,000 ha in 2009 (1). Soybean is also gaining importance in Mozambique and several other southern African countries due to diversification programs. During a field survey conducted in March 2010, soybean plants with phyllody and witches'-broom disorders typical of phytoplasma infection were observed in three of five fields surveyed in Lilongwe (Chitedze Research Station) and Salima (Channa, Chitala) districts in Malawi and three of four fields surveyed in Zambezia Province in Mozambique. Symptoms consisted of shoot proliferation, reduced leaflets, shortened internodes, proliferated auxiliary shoots producing witches'-brooms, virescence, and phyllody. Incidence of symptomatic plants was <1% in Malawi and 10 to 15% in Mozambique. Yield loss was 100% in affected plants. Five leaf samples each from symptomatic and asymptomatic plants were collected from six fields; total genomic DNAs were isolated and used as templates in PCR using phytoplasma-universal primer pair P1 and P7 for 16S-23S ribosomal RNA encoding region (3). PCR amplicons (1,709 bp) were produced from only templates derived from symptomatic plants. Amplicons from a symptomatic plant each from Malawi (Channa, Salima District) and Mozambique (Mutequelse, Zambezia Province) were directly sequenced in both directions and submitted to the GenBank (Accession Nos. HQ840717 and HQ845208). Nucleotide sequences of the two African soybean witches'-broom (SoyWB) phytoplasma strains were 100% identical. The virtual restriction fragment length polymorphism (RFLP) pattern derived from these sequences using iPhyClassifier software (4) was similar to the reference pattern of the 16Sr group II, subgroup C (cactus phytoplasma, Accession No. AJ293216), with a pattern similarity coefficient of 0.99. A BLASTn search revealed that the African SoyWB phytoplasma sequences had a nucleotide sequence identity of 99% with those of soybean phytoplasma from Thailand (Accession No. EF193353), cactus phytoplasma from China (Accession No. EU099561), and several other members of 16SrII group. Phylogenetic analysis revealed the clustering of these strains with members of 16SrII group. In 1984, the occurrence of phyllody and witches'-broom symptoms in soybean in Mozambique was reported (2), however, no comprehensive details on the pathogen are available. To our knowledge, this is the first report of phyllody and witches'-broom disease in soybean in Malawi and the first molecular evidence of association of a 16SrII-C group ‘Candidatus phytoplasma’ with the disease in Malawi and Mozambique. Phyllody and witches'-broom is a destructive disease, and its widespread occurrence can adversely affect soybean production in sub-Saharan Africa. Identification of alternative hosts and vector species would improve our understanding of the disease's epidemiology and contribute to development of appropriate tactics to prevent escalation of this problem into a major disease

Potential of inoculant and phosphorus application on soybean production in Mozambique

Open Access ArticleInoculation with effective Bradyrhizobium spp., and phosphorus application enhance atmospheric nitrogen fixation in soybean production. Soybean form symbiotic associations with the right rhizobium strain to incorporate atmospheric nitrogen into the plant tissues. The objective of this study was to evaluate responses of two soybean varieties to inoculation, phosphorus and starter-nitrogen, and their interactions on nodulation, growth, yield components and grain yield in different agroecologies of Mozambique. The study was conducted at three locations in Nampula, Tete and Zambézia provinces in Mozambique during 2012 and 2013 seasons. Two soybean genotypes (Storm and TGx 1904-6F) in split-plot design with phosphorus (P2O5) rates as main plot, inoculation application as subplots and nitrogen rates as sub-sub plots with four replications were used. Nodulation, plant growth, biomass nutrient content at R3 stage, yield and yield components were evaluated. Data analyzed for combined and individual locations in Statistical Analysis System® 9.4 indicated that inoculation increased nodulation and yield (37% to 95%) in both soybean genotypes but the effect of phosphorus on nodule formation was not consistent across sites and varieties. Inoculants have a potential to supply required nitrogen for soybean production in Mozambique because farmers seldom use mineral fertilizers due to its high cost

Isolation, characterization and selection of indigenous Bradyrhizobium strains with outstanding symbiotic performance to increase soybean yields in Mozambique.

Article purchasedSoybean inoculation with effective rhizobial strains makes unnecessary the use of N-fertilizers in the tropics. A frequently reported problem is the failure of the inoculant strains to overcome the competition imposed by indigenous rhizobial populations. The screening of indigenous rhizobia, already adapted to local conditions, searching for highly effective strains for use as inoculants represents a promising strategy in overcoming inoculation failure. The objective of this study was to isolate and characterize indigenous rhizobia and to identify strains that hold potential to be included in inoculant formulations for soybean production, with both promiscuous and non-promiscuous soybean cultivars, in Mozambican agro-climatic conditions. A total of 105 isolates obtained from nodules of promiscuous soybean grown at 15 sites were screened for N2-fixation effectiveness in the greenhouse along with five commercial strains. Eighty-seven isolates confirmed the ability to form effective nodules on soybean and were used for genetic characterization by rep-PCR (BOX) and sequencing of the 16S rRNA gene, and also for symbiotic effectiveness. BOX-PCR fingerprinting revealed remarkable genetic diversity, with 41 clusters formed, considering a similarity level of 65%. The 16S rRNA analysis assigned the isolates to the genera Bradyrhizobium (75%) and Agrobacterium/Rhizobium (25%). Great variability in symbiotic effectiveness was detected among the indigenous rhizobia from Mozambique, with ten isolates performing better than the commercial strain B. diazoefficiens USDA 110, the best reference strain, and 51 isolates with lower performance than all reference strains. Thirteen of the best isolates from the first greenhouse trial were evaluated, along with the five commercial strains, in two promiscuous (TGx 1963-3F and TGx 1835-10E) and one non-promiscuous (BRS 284) soybean cultivars in a second greenhouse trial. In general the promiscous soybeans responded better to inoculation. The 13 isolates were also characterized for tolerance to acidity and alkalinity (pH 3.5 and 9.0, respectively), salinity (0.1, 0.3 and 0.5 mol L−1 of NaCl) and high temperatures (35, 40 and 45 °C) in vitro. Five isolates, three (Moz 4, Moz 19 and Moz 22) belonging to the superclade B. elkanii and two (Moz 27 and Moz 61) assigned to the superclade B. japonicum, consistently showed high symbiotic effectiveness, suggesting that the inoculation with indigenous rhizobia adapted to local conditions represents a possible strategy for increasing soybean yields in Mozambique. Phylogenetic position of the five elite isolates was confirmed by the MLSA with four protein-coding housekeeping genes, dnaK, glnII, gyrB and recA

Inoculant formulation and application determine nitrogen availability and water use efficiency in soybean production

Published online: 22 Feb 2022Inoculation of suitable rhizobia enhances biological nitrogen fixation in soybean production and are economically viable for use among smallholder farmers due to its low price over inorganic commercial fertilizer blends. In Mozambique, inoculants are available in liquid or solid form (powder/peat or granular). Field studies were conducted in 2017 and 2018 seasons in three agroecologies (Angonia, Nampula and Ruace) in Mozambique to evaluate the performance of inoculants when applied directly to soil and on seed before planting. Data on nodulation, plant growth, nitrogen fixed, 13C isotope discrimination related water use efficiency, yield and yield components were analyzed in Statistical Analysis System® 9.4. Nodulation, yield, and yield components were significant for the different application methods, and solid form tended to be better than liquid form. The nitrogen derived from atmosphere (%Ndfa) were 45.3%, 44.2% and 43.6% with a yield of 2672, 1752 and 2246 kg ha 1 for Angonia, Nampula and Ruace, respectively. Overall, inoculants applied on soil or seed increase the amount of biologically fixed nitrogen and has the potential of improving soybean productivity in Mozambique

Isolation, characterization and selection of indigenous Bradyrhizobium strains with outstanding symbiotic performance to increase soybean yields in Mozambique.

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N2Africa Project Mozambique Exit Strategy

This study aims to explore the description of the Job Demand on the Guard Railway Track. The method used in this research is qualitative descriptive by using phenomenology approach on guard of railway Track. Researchers selected four subjects who were in Surabaya as research samples. The result of the research, the subject in carrying out his work showed the existence of Job Demand proposed by Bakker (2003), covering; field work that triggers emotional feelings in the subject, excessive workload, and fieldwork that requires a lot of concentration. The results of research on four subjects result that the demands of work in the field triger emergence of emotional feelings on all subjects, as well as the work load is felt excessive, and fieldwork that requires high concentration