Defects in the Compound Bi2te3 Caused by Irradiation with Protons

Defects in single crystals of bismuth telluride caused by proton irradiatio

Mycorrhizal densities decline in association with nonnative plants and contribute to plant invasion

Belowground interactions between herbaceous native species and nonnative species is a poorly understood but emerging area of interest to invasive-species researchers. Positive feedback dynamics are commonly observed in many invaded systems and have been suspected in California grasslands, where native plants associate strongly with soil mutualists such as arbuscular mycorrhizal fungi. In response to disturbance, invading nonnative plants proliferate, and to the degree these species associate weakly with soil mutualists, we would expect mutualist efficacy to degrade over time. Degraded mutualist efficacy would negatively impact mutualist-dependent native species or their recruitment following a disturbance. We investigated the feedback dynamics of soil conditioned both with native and nonnative herbaceous communities of southern California grasslands to test this degraded mutualist hypothesis. Using a mesocosm approach, we inoculated each community with live soil originating from a remnant native grassland and varied the plant communities (i.e., native or nonnative) along a plant–species-richness gradient. After one year, we then used this conditioned soil for reciprocal feedback tests on a native and nonnative indicator species. We show that a native herbaceous forb (Gnaphalium californicum) grows best in soil conditioned by a diverse mix of other native species that includes G. californicum but is inhibited by soil conditioned by a diverse mix of nonnative species. We also show that an invasive, nonnative herbaceous forb (Carduus pycnocephalus) exhibits strong growth in soil lacking arbuscular mycorrhizal fungi and in soil conditioned by a diverse mix of nonnative species that include C. pycnocephalus, and that it is inhibited by the same soil that best promotes the native, G. californicum. Separate bioassays for mycorrhizal density show a reduction of arbuscular mycorrhizal fungi in the nonnative-conditioned soil relative to the native-conditioned soil, which suggests that nonnative species do not promote the growth of mycorrhizal fungi in the same way that native species do. The growth patterns resulting from the vegetative history of these distinct soil communities provide evidence of a biotic feedback mechanism that may account for the maintenance of persistent communities of nonnative (and often invasive) plants ubiquitous throughout California grasslands

Optimal population-level infection detection strategies for malaria control and elimination in a spatial model of malaria transmission

Mass campaigns with antimalarial drugs are potentially a powerful tool for local elimination of malaria, yet current diagnostic technologies are insufficiently sensitive to identify all individuals who harbor infections. At the same time, overtreatment of uninfected individuals increases the risk of accelerating emergence of drug resistance and losing community acceptance. Local heterogeneity in transmission intensity may allow campaign strategies that respond to index cases to successfully target subpatent infections while simultaneously limiting overtreatment. While selective targeting of hotspots of transmission has been proposed as a strategy for malaria control, such targeting has not been tested in the context of malaria elimination. Using household locations, demographics, and prevalence data from a survey of four health facility catchment areas in southern Zambia and an agent-based model of malaria transmission and immunity acquisition, a transmission intensity was fit to each household based on neighborhood age-dependent malaria prevalence. A set of individual infection trajectories was constructed for every household in each catchment area, accounting for heterogeneous exposure and immunity. Various campaign strategies (mass drug administration, mass screen and treat, focal mass drug administration, snowball reactive case detection, pooled sampling, and a hypothetical serological diagnostic) were simulated and evaluated for performance at finding infections, minimizing overtreatment, reducing clinical case counts, and interrupting transmission. For malaria control, presumptive treatment leads to substantial overtreatment without additional morbidity reduction under all but the highest transmission conditions. Selective targeting of hotspots with drug campaigns is an ineffective tool for elimination due to limited sensitivity of available field diagnostics

On the X-ray Emission from Massive Star Clusters and their Evolving Superbubbles

The X-ray emission properties from the hot thermalized plasma that results from the collisions of individual stellar winds and supernovae ejecta within rich and compact star clusters are discussed. We propose a simple analytical way of estimating the X-ray emission generated by super star clusters and derive an expression that indicates how this X-ray emission depends on the main cluster parameters. Our model predicts that the X-ray luminosity from the star cluster region is highly dependent on the star cluster wind terminal speed, a quantity related to the temperature of the thermalized ejecta.We have also compared the X-ray luminosity from the SSC plasma with the luminosity of the interstellar bubbles generated from the mechanical interaction of the high velocity star cluster winds with the ISM.We found that the hard (2.0 keV - 8.0 keV) X-ray emission is usually dominated by the hotter SSC plasma whereas the soft (0.3 keV - 2.0 keV) component is dominated by the bubble plasma. This implies that compact and massive star clusters should be detected as point-like hard X-ray sources embedded into extended regions of soft diffuse X-ray emission. We also compared our results with predictions from the population synthesis models that take into consideration binary systems and found that in the case of young,massive and compact super star clusters the X-ray emission from the thermalized star cluster plasma may be comparable or even larger than that expected from the HMXB population.Comment: 24 pages, 8 figures, Accepted for publication in The Astrophysical Journa

Malaria elimination campaigns in the Lake Kariba region of Zambia: a spatial dynamical model

Background As more regions approach malaria elimination, understanding how different interventions interact to reduce transmission becomes critical. The Lake Kariba area of Southern Province, Zambia, is part of a multi-country elimination effort and presents a particular challenge as it is an interconnected region of variable transmission intensities. Methods In 2012-13, six rounds of mass-screen-and-treat drug campaigns were carried out in the Lake Kariba region. A spatial dynamical model of malaria transmission in the Lake Kariba area, with transmission and climate modeled at the village scale, was calibrated to the 2012-13 prevalence survey data, with case management rates, insecticide-treated net usage, and drug campaign coverage informed by surveillance. The model was used to simulate the effect of various interventions implemented in 2014-22 on reducing regional transmission, achieving elimination by 2022, and maintaining elimination through 2028. Findings The model captured the spatio-temporal trends of decline and rebound in malaria prevalence in 2012-13 at the village scale. Simulations predicted that elimination required repeated mass drug administrations coupled with simultaneous increase in net usage. Drug campaigns targeted only at high-burden areas were as successful as campaigns covering the entire region. Interpretation Elimination in the Lake Kariba region is possible through coordinating mass drug campaigns with high-coverage vector control. Targeting regional hotspots is a viable alternative to global campaigns when human migration within an interconnected area is responsible for maintaining transmission in low-burden areas

Plant-soil feedbacks promote coexistence and resilience in multi-species communities

Both ecological theory and empirical evidence suggest that negative frequency dependent feedbacks structure plant communities, but integration of these findings has been limited. Here we develop a generic model of frequency dependent feedback to analyze coexistence and invasibility in random theoretical and real communities for which frequency dependence through plant-soil feedbacks (PSFs) was determined empirically. We investigated community stability and invasibility by means of mechanistic analysis of invasion conditions and numerical simulations. We found that communities fall along a spectrum of coexistence types ranging from strict pair-wise negative feedback to strict intransitive networks. Intermediate community structures characterized by partial intransitivity may feature “keystone competitors” which disproportionately influence community stability. Real communities were characterized by stronger negative feedback and higher robustness to species loss than randomly assembled communities. Partial intransitivity became increasingly likely in more diverse communities. The results presented here theoretically explain why more diverse communities are characterized by stronger negative frequency dependent feedbacks, a pattern previously encountered in observational studies. Natural communities are more likely to be maintained by strict negative plant-soil feedback than expected by chance, but our results also show that community stability often depends on partial intransitivity. These results suggest that plant-soil feedbacks can facilitate coexistence in multi-species communities, but that these feedbacks may also initiate cascading effects on community diversity following from single-species loss.DEB - 0919434, DEB - 1050237, DEB-1556664, DEB-173804

Large Deletions in the pAtC58 Megaplasmid of Agrobacterium tumefaciens Can Confer Reduced Carriage Cost and Increased Expression of Virulence Genes

The accessory plasmid pAtC58 of the common laboratory strain of Agrobacterium tumefaciens confers numerous catabolic functions and has been proposed to play a role in virulence. Genomic sequencing of evolved laboratory strains of A. tumefaciens revealed the presence of multiple deletion events in the At plasmid, with reductions in plasmid size ranging from 25% to 30% (115–194 kb). Flanking both ends of the sites of these deletions is a short-nucleotide repeat sequence that is in a single copy in the deleted plasmids, characteristic of a phage- or transposon-mediated deletion event. This repeat sequence is widespread throughout the C58 genome, but concentrated on the At plasmid, suggesting its frequency to be nonrandom. In this study, we assess the prevalence of the larger of these deletions in multiple C58 derivatives and characterize its functional significance. We find that in addition to elevating virulence gene expression, this deletion is associated with a significantly reduced carriage cost to the cell. These observations are a clear demonstration of the dynamic nature of the bacterial genome and suggest a mechanism for genetic plasticity of these costly but otherwise stable plasmids. Additionally, this phenomenon could be the basis for some of the dramatic recombination events so ubiquitous within and among megaplasmids