Soil Carbon and Nitrogen Dynamics After Pasture Installation in the Amazon Region

The objective of this paper is to present the soil carbon (C) and nitrogen (N) dynamics in a chronosequence made of a forest and pastures of different ages established in a Oxisol in the Western Brazilian Amazon Basin. The results of soil Carbon and Nitrogen stocks and gases fluxes were discussed. Stable 13C isotopic technique was used to calculate for a determinate age of pasture installation, the proportion of soil C remaining from the forest system and the proportion of soil C introduced by the grasses of the pasture system. The C lost from the original pool under the forest is 1.0 to 1.6 kg C m-2 concentrated during the first 5 years as pasture, and that the C fixed by the pasture (net fixation) is 1.7 to 2.3 kg C m-2 for the total period of 35 years. We agree with the assumption that cattle ranching would never be a profit-making venture as long as only the revenue from the sale of cattle is taken into account. But, now a days, the notions of taxes or refunds for C sequestration and land rehabilitation turn the management of areas that have already been converted to pasture a strategy for C sequestration

Agricultura tropical e aquecimento global: impactos e opções de mitigação

O uso intensivo da terra invariavelmente causa efeitos negativos ao ambiente e produção agrícola se práticas conservativas não forem adotadas. Redução na quantidade de matéria orgânica do solo significa emissão de gases (principalmente CO2, CH4, N2O) para a atmosfera e aumento do aquecimento global. A sustentabilidade do solo é também afetada, uma vez que a qualidade da matéria orgânica remanescente muda. Alterações podem ser verificadas, por exemplo, pela desagregação do solo e mudança na sua estrutura. As consequências são erosão, redução na disponibilidade de nutrientes para as plantas e baixa capacidade de retenção de água no solo. Estes e outros fatores refletem negativamente na produtivade das culturas e sustentabilidade do sistema solo-planta-atmosfera. Ao contrário, a adoção de boas práticas de manejo, tal como o sistema plantio direto, pode parcialmente reverter o processo, uma vez que objetiva o aumento das entradas de material orgânico no solo e/ou diminuição das taxas de decomposição da matéria orgânica do solo.The intensive land use invariably has several negative effects on the environment and crop production if conservative practices are not adopted. Reduction in soil organic matter (SOM) quantity means gas emission (mainly CO2, CH4, N2O) to the atmosphere and increased global warming. Soil sustainability is also affected, since remaining SOM quality changes. Alterations can be verified, for example, by soil desegregation and changes in structure. The consequences are erosion, reduction in nutrient availability for the plants and lower water retention capacity. These and other factors reflect negatively on crop productivity and sustainability of the soil-plant-atmosphere system. Conversely, adoption of "best management practices", such as conservation tillage, can partly reverse the process - they are aimed at increasing the input of organic matter to the soil and/or decreasing the rates at which soil organic matter decomposes

Modelling Grass Productivity in the Brazilian Amazon

The Amazon Basin covers an area of 7 million km2, and the central part is almost entirely located within Brazilian territory. This region has the highest rates of deforestation in the world, and the total area deforested now exceeds 600,000 km2. Cattle pasture represents the largest single use (about 70%) of this once-forested land in most of the Brazilian Basin, with an estimated area of 20 million hectares. Our main objective was to simulate grass productivity in different forest to pasture chronosequences within the Brazilian Amazon

The tomato Prf complex is a molecular trap for bacterial effectors based on Pto transphosphorylation

The bacteria Pseudomonas syringae is a pathogen of many crop species and one of the model pathogens for studying plant and bacterial arms race coevolution. In the current model, plants perceive bacteria pathogens via plasma membrane receptors, and recognition leads to the activation of general defenses. In turn, bacteria inject proteins called effectors into the plant cell to prevent the activation of immune responses. AvrPto and AvrPtoB are two such proteins that inhibit multiple plant kinases. The tomato plant has reacted to these effectors by the evolution of a cytoplasmic resistance complex. This complex is compromised of two proteins, Prf and Pto kinase, and is capable of recognizing the effector proteins. How the Pto kinase is able to avoid inhibition by the effector proteins is currently unknown. Our data shows how the tomato plant utilizes dimerization of resistance proteins to gain advantage over the faster evolving bacterial pathogen. Here we illustrate that oligomerisation of Prf brings into proximity two Pto kinases allowing them to avoid inhibition by the effectors by transphosphorylation and to activate immune responses

Autoacetylation of the Ralstonia solanacearum Effector PopP2 Targets a Lysine Residue Essential for RRS1-R-Mediated Immunity in Arabidopsis

Type III effector proteins from bacterial pathogens manipulate components of host immunity to suppress defence responses and promote pathogen development. In plants, host proteins targeted by some effectors called avirulence proteins are surveyed by plant disease resistance proteins referred to as “guards”. The Ralstonia solanacearum effector protein PopP2 triggers immunity in Arabidopsis following its perception by the RRS1-R resistance protein. Here, we show that PopP2 interacts with RRS1-R in the nucleus of living plant cells. PopP2 belongs to the YopJ-like family of cysteine proteases, which share a conserved catalytic triad that includes a highly conserved cysteine residue. The catalytic cysteine mutant PopP2-C321A is impaired in its avirulence activity although it is still able to interact with RRS1-R. In addition, PopP2 prevents proteasomal degradation of RRS1-R, independent of the presence of an integral PopP2 catalytic core. A liquid chromatography/tandem mass spectrometry analysis showed that PopP2 displays acetyl-transferase activity leading to its autoacetylation on a particular lysine residue, which is well conserved among all members of the YopJ family. These data suggest that this lysine residue may correspond to a key binding site for acetyl-coenzyme A required for protein activity. Indeed, mutation of this lysine in PopP2 abolishes RRS1-R-mediated immunity. In agreement with the guard hypothesis, our results favour the idea that activation of the plant immune response by RRS1-R depends not only on the physical interaction between the two proteins but also on its perception of PopP2 enzymatic activity

Structure-Function Analysis of Barley NLR Immune Receptor MLA10 Reveals Its Cell Compartment Specific Activity in Cell Death and Disease Resistance

Plant intracellular immune receptors comprise a large number of multi-domain proteins resembling animal NOD-like receptors (NLRs). Plant NLRs typically recognize isolate-specific pathogen-derived effectors, encoded by avirulence (AVR) genes, and trigger defense responses often associated with localized host cell death. The barley MLA gene is polymorphic in nature and encodes NLRs of the coiled-coil (CC)-NB-LRR type that each detects a cognate isolate-specific effector of the barley powdery mildew fungus. We report the systematic analyses of MLA10 activity in disease resistance and cell death signaling in barley and Nicotiana benthamiana. MLA10 CC domain-triggered cell death is regulated by highly conserved motifs in the CC and the NB-ARC domains and by the C-terminal LRR of the receptor. Enforced MLA10 subcellular localization, by tagging with a nuclear localization sequence (NLS) or a nuclear export sequence (NES), shows that MLA10 activity in cell death signaling is suppressed in the nucleus but enhanced in the cytoplasm. By contrast, nuclear localized MLA10 is sufficient to mediate disease resistance against powdery mildew fungus. MLA10 retention in the cytoplasm was achieved through attachment of a glucocorticoid receptor hormone-binding domain (GR), by which we reinforced the role of cytoplasmic MLA10 in cell death signaling. Together with our data showing an essential and sufficient nuclear MLA10 activity in disease resistance, this suggests a bifurcation of MLA10-triggered cell death and disease resistance signaling in a compartment-dependent manner

Structural Insights into TIR Domain Specificity of the Bridging Adaptor Mal in TLR4 Signaling

MyD88 adaptor-like protein (Mal) is a crucial adaptor that acts as a bridge to recruit the MyD88 molecule to activated TLR4 receptors in response to invading pathogens. The specific assembly of the Toll/interleukin-1 receptor (TIR) domains of TLR4, Mal and MyD88 is responsible for proper signal transduction in the TLR4 signaling pathway. However, the molecular mechanism for the specificity of these TIR domains remains unclear. Here, we present the crystal structure of the TIR domain of the human Mal molecule (Mal-TIR) at a resolution of 2.4 Å. Unexpectedly, Mal-TIR exhibits an extraordinarily long AB loop, but no αB helix or BB loop, distinguishing it from other TIR domains. More importantly, the Mal-TIR AB loop is capable of mediating direct binding to the TIR domains of TLR4 and MyD88 simultaneously. We also found that Mal-TIR can form a back-to-back dimer that may resemble the dimeric assembly of the entire Mal molecule. Our data demonstrate the bridge role of the Mal-TIR domain and provide important information about TIR domain specificity