Causalities of war: The connection between type VI secretion system and microbiota

Cellular Microbiology published by John Wiley & Sons Ltd Microbiota niches have space and/or nutrient restrictions, which has led to the coevolution of cooperation, specialisation, and competition within the population. Different animal and environmental niches contain defined resident microbiota that tend to be stable over time and offer protection against undesired intruders. Yet fluxes can occur, which alter the composition of a bacterial population. In humans, the microbiota are now considered a key contributor to maintenance of health and homeostasis, and its alteration leads to dysbiosis. The bacterial type VI secretion system (T6SS) transports proteins into the environment, directly into host cells or can function as an antibacterial weapon by killing surrounding competitors. Upon contact with neighbouring cells, the T6SS fires, delivering a payload of effector proteins. In the absence of an immunity protein, this results in growth inhibition or death of prey leading to a competitive advantage for the attacker. It is becoming apparent that the T6SS has a role in modulating and shaping the microbiota at multiple levels, which is the focus of this review. Discussed here is the T6SS, its role in competition, key examples of its effect upon the microbiota, and future avenues of researc

Hyperuniform long-range correlations are a signature of disordered jammed hard-particle packings

We show that quasi-long-range (QLR) pair correlations that decay asymptotically with scaling $r^{-(d+1)}$ in $d$-dimensional Euclidean space $\mathbb{R}^d$, trademarks of certain quantum systems and cosmological structures, are a universal signature of maximally random jammed (MRJ) hard-particle packings. We introduce a novel hyperuniformity descriptor in MRJ packings by studying local-volume-fraction fluctuations and show that infinite-wavelength fluctuations vanish even for packings with size- and shape-distributions. Special void statistics induce hyperuniformity and QLR pair correlations.Comment: 10 pages, 3 figures; changes to figures and text based on review process; accepted for publication at Phys. Rev. Let

J D Bernal: philosophy, politics and the science of science

This paper is an examination of the philosophical and political legacy of John Desmond Bernal. It addresses the evidence of an emerging consensus on Bernal based on the recent biography of Bernal by Andrew Brown and the reviews it has received. It takes issue with this view of Bernal, which tends to be admiring of his scientific contribution, bemused by his sexuality, condescending to his philosophy and hostile to his politics. This article is a critical defence of his philosophical and political position

J D Bernal: philosophy, politics and the science of science

This paper is an examination of the philosophical and political legacy of John Desmond Bernal. It addresses the evidence of an emerging consensus on Bernal based on the recent biography of Bernal by Andrew Brown and the reviews it has received. It takes issue with this view of Bernal, which tends to be admiring of his scientific contribution, bemused by his sexuality, condescending to his philosophy and hostile to his politics. This article is a critical defence of his philosophical and political position

A Symmetry Adapted Approach to Molecular Spectroscopy: The Anharmonic Oscillator Symmetry Model

We apply the Anharmonic Oscillator Symmetry Model to the description of vibrational excitations in ${\cal D}_{3h}$ and ${\cal T}_d$ molecules. A systematic procedure can be used to establish the relation between the algebraic and configuration space formulations, by means of which new interactions are found in the algebraic model, leading to reliable spectroscopic predictions. We illustrate the method for the case of ${\cal D}_{3h}$-triatomic molecules and the ${\cal T}_d$ Be-cluster.Comment: 12 pages, invited talk at XIX Oaxtepec Symposium on Nuclear Physics, January 199

The Jahn-Teller active fluoroperovskites ACrF3A\mathrm{CrF_3} A=Na+,K+A=\mathrm{Na^+},\mathrm{K^+}: thermo- and magneto optical correlations as function of the AA-site

Chromium (II) fluoroperovskites $A\mathrm{CrF_3}(A\mathrm{=Na^+,K^+})$ are strongly correlated Jahn-Teller active materials at low temperatures. In this paper, we examine the role that the $A$-site ion plays in this family of fluoroperovskites using both experimental methods (XRD, optical absorption spectroscopy and magnetic fields) and DFT simulations. Temperature-dependent optical absorption experiments show that the spin-allowed transitions $E_2$ and $E_3$ only merge completely for $A$= Na at 2 K. Field-dependent optical absorption measurements at 2 K show that the oscillating strength of the spin-allowed transitions in $\mathrm{NaCrF_3}$ increases with increasing applied field. Direct magneto-structural correlations which suppress the spin-flip transitions are observed for ${\rm KCrF_3}$ below its Ne\'el temperature. In ${\rm NaCrF_3}$ the spin-flip transitions vanish abruptly below 9 K revealing magneto-optical correlations not linked to crystal structure changes. This suggests that as the long range ordering is reduced local JT effects in the individual ${\rm CrF_6^{4-}}$ octahedra take control of the observed behavior. Our results show clear deviation from the pattern found for the isoelectronic $A_x{\rm MnF}_{3+x}$ system. The size of the $A$-site cation is shown to be central in dictating the physical properties and phase transitions in $A{\rm CrF}_3$, opening up the possibility of varying the composition to create novel states of matter with tuneable properties

Nanostructuring lithium niobate substrates by focused ion beam milling

We report on two novel ways for patterning Lithium Niobate (LN) at submicronic scale by means of focused ion beam (FIB) bombardment. The first method consists of direct FIB milling on LiNbO3 and the second one is a combination of FIB milling on a deposited metallic layer and subsequent RIE (Reactive Ion Etching) etching. FIB images show in both cases homogeneous structures with well reproduced periodicity. These methods open the way to the fabrication of photonic crystals on LiNbO3 substrates

Dimensional analysis and Rutherford Scattering

Dimensional analysis, and in particular the Buckingham $\Pi$ theorem is widely used in fluid mechanics. In this article we obtain an expression for the impact parameter from Buckingham's theorem and we compare our result with Rutherford's original discovery found in the early twentieth century