744 research outputs found
Transcriptional profiling of olfactory system development identifies distal antenna as a regulator of subset of neuronal fates
Drosophila uses 50 different olfactory receptor neuron (ORN) classes that are clustered within distinct sensilla subtypes to decipher their chemical environment. Each sensilla subtype houses 1â4 ORN identities that arise through asymmetric divisions of a single sensory organ precursor (SOP). Despite a number of mutational studies investigating the regulation of ORN development, a majority of the transcriptional programs that lead to the different ORN classes in the developing olfactory system are unknown. Here we use transcriptional profiling across the time series of antennal development to identify novel transcriptional programs governing the differentiation of ORNs. We surveyed four critical developmental stages of the olfactory system: 3rd instar larval (prepatterning), 8 hours after puparium formation (APF, SOP selection), 40 hrs APF (neurogenesis), and adult antennae. We focused on the expression profiles of olfactory receptor genes and transcription factorsâthe two main classes of genes that regulate the sensory identity of ORNs. We identify distinct clusters of genes that have overlapping temporal expression profiles suggesting they have a key role during olfactory system development. We show that the expression of the transcription factor distal antenna (dan) is highly similar to other prepatterning factors and is required for the expression of a subset of ORs
A Functionally Conserved Gene Regulatory Network Module Governing Olfactory Neuron Diversity
Sensory neuron diversity is required for organisms to decipher complex environmental cues. In Drosophila, the olfactory environment is detected by 50 different olfactory receptor neuron (ORN) classes that are clustered in combinations within distinct sensilla subtypes. Each sensilla subtype houses stereotypically clustered 1â4 ORN identities that arise through asymmetric divisions from a single multipotent sensory organ precursor (SOP). How each class of SOPs acquires a unique differentiation potential that accounts for ORN diversity is unknown. Previously, we reported a critical component of SOP diversification program, Rotund (Rn), increases ORN diversity by generating novel developmental trajectories from existing precursors within each independent sensilla type lineages. Here, we show that Rn, along with BarH1/H2 (Bar), Bric-Ă -brac (Bab), Apterous (Ap) and Dachshund (Dac), constitutes a transcription factor (TF) network that patterns the developing olfactory tissue. This network was previously shown to pattern the segmentation of the leg, which suggests that this network is functionally conserved. In antennal imaginal discs, precursors with diverse ORN differentiation potentials are selected from concentric rings defined by unique combinations of these TFs along the proximodistal axis of the developing antennal disc. The combinatorial code that demarcates each precursor field is set up by cross-regulatory interactions among different factors within the network. Modifications of this network lead to predictable changes in the diversity of sensilla subtypes and ORN pools. In light of our data, we propose a molecular map that defines each unique SOP fate. Our results highlight the importance of the early prepatterning gene regulatory network as a modulator of SOP and terminally differentiated ORN diversity. Finally, our model illustrates how conserved developmental strategies are used to generate neuronal diversity
Coherent Bayesian inference on compact binary inspirals using a network of interferometric gravitational wave detectors
Presented in this paper is a Markov chain Monte Carlo (MCMC) routine for
conducting coherent parameter estimation for interferometric gravitational wave
observations of an inspiral of binary compact objects using data from multiple
detectors. The MCMC technique uses data from several interferometers and infers
all nine of the parameters (ignoring spin) associated with the binary system,
including the distance to the source, the masses, and the location on the sky.
The Metropolis-algorithm utilises advanced MCMC techniques, such as importance
resampling and parallel tempering. The data is compared with time-domain
inspiral templates that are 2.5 post-Newtonian (PN) in phase and 2.0 PN in
amplitude. Our routine could be implemented as part of an inspiral detection
pipeline for a world wide network of detectors. Examples are given for
simulated signals and data as seen by the LIGO and Virgo detectors operating at
their design sensitivity.Comment: 10 pages, 4 figure
Patterns of transcriptional parallelism and variation in the developing olfactory system of Drosophila species
Organisms have evolved strikingly parallel phenotypes in response to similar selection pressures suggesting that there may be shared constraints limiting the possible evolutionary trajectories. For example, the behavioral adaptation of specialist Drosophila species to specific host plants can exhibit parallel changes in their adult olfactory neuroanatomy. We investigated the genetic basis of these parallel changes by comparing gene expression during the development of the olfactory system of two specialist Drosophila species to that of four other generalist species. Our results suggest that the parallelism observed in the adult olfactory neuroanatomy of ecological specialists extends more broadly to their developmental antennal expression profiles, and to the transcription factor combinations specifying olfactory receptor neuron (ORN) fates. Additionally, comparing general patterns of variation for the antennal transcriptional profiles in the adult and developing olfactory system of the six species suggest the possibility that specific, non-random components of the developmental programs underlying the Drosophila olfactory system harbor a disproportionate amount of interspecies variation. Further examination of these developmental components may be able to inform a deeper understanding of how traits evolve
Short GRB and binary black hole standard sirens as a probe of dark energy
Observations of the gravitational radiation from well-localized, inspiraling
compact object binaries can measure absolute source distances with high
accuracy. When coupled with an independent determination of redshift through an
electromagnetic counterpart, these standard sirens can provide an excellent
probe of the expansion history of the Universe and the dark energy. Short
gamma-ray bursts, if produced by merging neutron star binaries, would be
standard sirens with known redshifts detectable by ground-based GW networks
such as LIGO-II, Virgo, and AIGO. Depending upon the collimation of these GRBs,
a single year of observation of their gravitational waves can measure the
Hubble constant to about 2%. When combined with measurement of the absolute
distance to the last scattering surface of the cosmic microwave background,
this determines the dark energy equation of state parameter w to 9%. Similarly,
supermassive binary black hole inspirals will be standard sirens detectable by
LISA. Depending upon the precise redshift distribution, 100 sources could
measure w at the 4% level.Comment: 8 pages, submitted to PR
Measurement of the B-Meson Inclusive Semileptonic Branching Fraction and Electron-Energy Moments
We report a new measurement of the B-meson semileptonic decay momentum
spectrum that has been made with a sample of 9.4/fb of electron-positron
annihilation data collected with the CLEO II detector at the Y(4S) resonance.
Electrons from primary semileptonic decays and secondary charm decays were
separated by using charge and angular correlations in Y(4S) events with a
high-momentum lepton and an additional electron. We determined the semileptonic
branching fraction to be (10.91 +- 0.09 +- 0.24)% from the normalization of the
electron-energy spectrum. We also measured the moments of the electron energy
spectrum with minimum energies from 0.6 GeV to 1.5 GeV.Comment: 36 pages postscript, als available through
http://w4.lns.cornell.edu/public/CLNS/, Submitted to PRD (back-to-back with
preceding preprint hep-ex/0403052
Detector Description and Performance for the First Coincidence Observations between LIGO and GEO
For 17 days in August and September 2002, the LIGO and GEO interferometer
gravitational wave detectors were operated in coincidence to produce their
first data for scientific analysis. Although the detectors were still far from
their design sensitivity levels, the data can be used to place better upper
limits on the flux of gravitational waves incident on the earth than previous
direct measurements. This paper describes the instruments and the data in some
detail, as a companion to analysis papers based on the first data.Comment: 41 pages, 9 figures 17 Sept 03: author list amended, minor editorial
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Setting upper limits on the strength of periodic gravitational waves from PSR J1939+2134 using the first science data from the GEO 600 and LIGO detectors
Data collected by the GEO 600 and LIGO interferometric gravitational wave detectors during their first observational science run were searched for continuous gravitational waves from the pulsar J1939+2134 at twice its rotation frequency. Two independent analysis methods were used and are demonstrated in this paper: a frequency domain method and a time domain method. Both achieve consistent null results, placing new upper limits on the strength of the pulsar's gravitational wave emission. A model emission mechanism is used to interpret the limits as a constraint on the pulsar's equatorial ellipticity
Analysis of LIGO data for gravitational waves from binary neutron stars
We report on a search for gravitational waves from coalescing compact binary
systems in the Milky Way and the Magellanic Clouds. The analysis uses data
taken by two of the three LIGO interferometers during the first LIGO science
run and illustrates a method of setting upper limits on inspiral event rates
using interferometer data. The analysis pipeline is described with particular
attention to data selection and coincidence between the two interferometers. We
establish an observational upper limit of 1.7 \times 10^{2}M_\odot$.Comment: 17 pages, 9 figure
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