3 research outputs found
Giovanni Francesco Abela’s legacy to the Jesuit College
It would have been much more appropriate if this paper had been
in last Week but at the time the idea of it had not yet been
conceived. 1982 marked the fourth centenary of the birth of Giovanni Francesco
Abela who was born in Valletta in the year 1582, 17 years after that
most notable and noble event in Maltese history, the of Malta
the Turks. though the latter event was
not the commemoration was, to my
of the birth of this distinguished Maltese forebear.
in his honour, as had been done
of his death.peer-reviewe
Oriented Covalent Immobilization of Antibodies for Measurement of Intermolecular Binding Forces between Zipper-Like Contact Surfaces of Split Inteins
In order to measure the intermolecular
binding forces between two
halves (or partners) of naturally split protein splicing elements
called inteins, a novel thiol-hydrazide linker was designed and used
to orient immobilized antibodies specific for each partner. Activation
of the surfaces was achieved in one step, allowing direct intermolecular
force measurement of the binding of the two partners of the split
intein (called protein <i>trans</i>-splicing). Through this
binding process, a whole functional intein is formed resulting in
subsequent splicing. Atomic force microscopy (AFM) was used to directly
measure the split intein partner binding at 1 μm/s between native
(wild-type) and mixed pairs of C- and N-terminal partners of naturally
occurring split inteins from three cyanobacteria. Native and mixed
pairs exhibit similar binding forces within the error of the measurement
technique (∼52 pN). Bioinformatic sequence analysis and computational
structural analysis discovered a zipper-like contact between the two
partners with electrostatic and nonpolar attraction between multiple
aligned ion pairs and hydrophobic residues. Also, we tested the Jarzynski’s
equality and demonstrated, as expected, that nonequilibrium dissipative
measurements obtained here gave larger energies of interaction as
compared with those for equilibrium. Hence, AFM coupled with our immobilization
strategy and computational studies provides a useful analytical tool
for the direct measurement of intermolecular association of split
inteins and could be extended to any interacting protein pair
MOESM3 of How does cellulosome composition influence deconstruction of lignocellulosic substrates in Clostridium (Ruminiclostridium) thermocellum DSM 1313?
Additional file 3: Table S1. Functional classes distribution of C. thermocellum DSM 1313 cellulosomal subunits. Cellulosomal subunits detected in the C. themocellum DSM 1313 proteome were sorted into five functional classes: endoglucanases, exoglucanases, hemicellulases, scaffoldins and others