403 research outputs found

    Quadrature noise in light propagating through a cold 87Rb atomic gas

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    We report on the study of the noise properties of laser light propagating through a cold 87Rb atomic sample held in a magneto-optical trap. The laser is tuned around the Fg = 2 \rightarrow Fe = 1, 2 D1 transitions of 87Rb. We observe quadrature-dependent noise in the light signal, an indication that it may be possible to produce squeezed states of light. We measure the minimum and maximum phase-dependent noise as a function of detuning and compare these results to theoretical predictions to explore the best conditions for light squeezing using cold atomic Rb

    Huddle test measurement of a near Johnson noise limited geophone

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    In this paper, the sensor noise of two geophone configurations (L-22D and L-4C geophones from Sercel with custom built amplifiers) was measured by performing two huddle tests. It is shown that the accuracy of the results can be significantly improved by performing the huddle test in a seismically quiet environment and by using a large number of reference sensors to remove the seismic foreground signal from the data. Using these two techniques, the measured sensor noise of the two geophone configurations matched the calculated predictions remarkably well in the bandwidth of interest (0.01 Hz–100 Hz). Low noise operational amplifiers OPA188 were utilized to amplify the L-4C geophone to give a sensor that was characterized to be near Johnson noise limited in the bandwidth of interest with a noise value of 10−11 m/Hz⎯⎯⎯⎯⎯√10−11 m/Hz at 1 Hz

    RNA secondary structure prediction from multi-aligned sequences

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    It has been well accepted that the RNA secondary structures of most functional non-coding RNAs (ncRNAs) are closely related to their functions and are conserved during evolution. Hence, prediction of conserved secondary structures from evolutionarily related sequences is one important task in RNA bioinformatics; the methods are useful not only to further functional analyses of ncRNAs but also to improve the accuracy of secondary structure predictions and to find novel functional RNAs from the genome. In this review, I focus on common secondary structure prediction from a given aligned RNA sequence, in which one secondary structure whose length is equal to that of the input alignment is predicted. I systematically review and classify existing tools and algorithms for the problem, by utilizing the information employed in the tools and by adopting a unified viewpoint based on maximum expected gain (MEG) estimators. I believe that this classification will allow a deeper understanding of each tool and provide users with useful information for selecting tools for common secondary structure predictions.Comment: A preprint of an invited review manuscript that will be published in a chapter of the book `Methods in Molecular Biology'. Note that this version of the manuscript may differ from the published versio

    Dynamic and volumetric variables reliably predict fluid responsiveness in a porcine model with pleural effusion

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    Background: The ability of stroke volume variation (SVV), pulse pressure variation (PPV) and global end-diastolic volume (GEDV) for prediction of fluid responsiveness in presence of pleural effusion is unknown. The aim of the present study was to challenge the ability of SVV, PPV and GEDV to predict fluid responsiveness in a porcine model with pleural effusions. Methods: Pigs were studied at baseline and after fluid loading with 8 ml kg−1 6% hydroxyethyl starch. After withdrawal of 8 ml kg−1 blood and induction of pleural effusion up to 50 ml kg−1 on either side, measurements at baseline and after fluid loading were repeated. Cardiac output, stroke volume, central venous pressure (CVP) and pulmonary occlusion pressure (PAOP) were obtained by pulmonary thermodilution, whereas GEDV was determined by transpulmonary thermodilution. SVV and PPV were monitored continuously by pulse contour analysis. Results: Pleural effusion was associated with significant changes in lung compliance, peak airway pressure and stroke volume in both responders and non-responders. At baseline, SVV, PPV and GEDV reliably predicted fluid responsiveness (area under the curve 0.85 (p<0.001), 0.88 (p<0.001), 0.77 (p = 0.007). After induction of pleural effusion the ability of SVV, PPV and GEDV to predict fluid responsiveness was well preserved and also PAOP was predictive. Threshold values for SVV and PPV increased in presence of pleural effusion. Conclusions: In this porcine model, bilateral pleural effusion did not affect the ability of SVV, PPV and GEDV to predict fluid responsiveness

    The 70 Percent Solution Summary Report

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    This summary report offers a different vision of how educators, employers, parents, and all those who care about the development of young people should understand and address life after high school. The report finds that students and all Americans need better and more informed choices for the next step after high school, and at every stage of their careers, as they seek the knowledge and skills that will help them succeed in the workplace and meet their economic necessities. It calls upon parents, students, policymakers, and educators to recognize the realities and opportunities of the changing new economy for people of different educational backgrounds -- and to support the increasing importance of lifelong learning to the success of so many Americans

    The 70 Percent Solution: Five Principles for Helping Young People Make Decisions During and After High School

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    This report offers a different vision of how educators, employers, parents, and all those who care about the development of young people should understand and address life after high school. The report finds that students and all Americans need better and more informed choices for the next step after high school, and at every stage of their careers, as they seek the knowledge and skills that will help them succeed in the workplace and meet their economic necessities. It calls upon parents, students, policymakers, and educators to recognize the realities and opportunities of the changing new economy for people of different educational backgrounds -- and to support the increasing importance of lifelong learning to the success of so many Americans

    Polarization Self-rotation in Ultracold Atomic Rb

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    We report on a combined experimental and theoretical study of polarization self-rotation in an ultracold atomic sample. In the experiments, a probe laser is tuned in the spectral vicinity of the D1 line to observe polarization self-rotation in a sample of ultracold Rb prepared in a magneto-optical trap. Systematic measurements of the rotation angle of the light-polarization ellipse as a function of laser intensity, initial ellipticity and detuning are made. The observations, in good agreement with theoretical simulations, are indicative of the presence of a residual static magnetic field, resulting in measured asymmetries in the rotation angle for right and left ellipticities. In this paper we present our detailed experimental results and analysis of the combined influences of polarization self-rotation and the Faraday effect.Comment: 9 pages, 12 figures Some figures redone for clarity, better explanation for discrepancy of model and experimental dat

    Root morphology and seed and leaf ionomic traits in a Brassica napus L. diversity panel show wide phenotypic variation and are characteristic of crop habit

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    Background: Mineral nutrient uptake and utilisation by plants are controlled by many traits relating to root morphology, ion transport, sequestration and translocation. The aims of this study were to determine the phenotypic diversity in root morphology and leaf and seed mineral composition of a polyploid crop species, Brassica napus L., and how these traits relate to crop habit. Traits were quantified in a diversity panel of up to 387 genotypes: 163 winter, 127 spring, and seven semiwinter oilseed rape (OSR) habits, 35 swede, 15 winter fodder, and 40 exotic/unspecified habits. Root traits of 14 d old seedlings were measured in a ‘pouch and wick’ system (n = ~24 replicates per genotype). The mineral composition of 3–6 rosette-stage leaves, and mature seeds, was determined on compost-grown plants from a designed experiment (n = 5) by inductively coupled plasma-mass spectrometry (ICP-MS). Results: Seed size explained a large proportion of the variation in root length. Winter OSR and fodder habits had longer primary and lateral roots than spring OSR habits, with generally lower mineral concentrations. A comparison of the ratios of elements in leaf and seed parts revealed differences in translocation processes between crop habits, including those likely to be associated with crop-selection for OSR seeds with lower sulphur-containing glucosinolates. Combining root, leaf and seed traits in a discriminant analysis provided the most accurate characterisation of crop habit, illustrating the interdependence of plant tissues. Conclusions: High-throughput morphological and composition phenotyping reveals complex interrelationships between mineral acquisition and accumulation linked to genetic control within and between crop types (habits) in B. napus. Despite its recent genetic ancestry (<10 ky), root morphology, and leaf and seed composition traits could potentially be used in crop improvement, if suitable markers can be identified and if these correspond with suitable agronomy and quality traits

    A922 Sequential measurement of 1 hour creatinine clearance (1-CRCL) in critically ill patients at risk of acute kidney injury (AKI)

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    In vivo and in vitro study of resorbable magnesium wires for medical implants: Mg purity, surface quality, Zn alloying and polymer coating

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    Magnesium is an excellent material in terms of biocompatibility and its corrosion products can serve as an active source for new bone formation. However, localized corrosion and H2 generation limit the potential of Mg-based implants. Utilizing low-alloyed Mg-Zn wires can strongly reduce problems with large H2 bubbles and improve the mechanical properties considerably while maintaining excellent long-term biocompatibility. Acidic pickling and a polymer coating can be effectively used to lower the rate of in vivo degradation. In this work, microstructural, mechanical, and in vitro characterization of 250 um and 300 um extruded wires made from ultra-pure Mg, commercially pure Mg, Mg-0.15Zn, Mg-0.4Zn and Mg-1Zn was performed. Additionally, Mg-0.4Zn wires together with a variant coated with a copolymer of L-lactide and {\epsilon}-caprolactone were tested in vivo on artificially damaged Wistar rat femurs. Based on the observed Mg-induced osteogenesis, polymer-coated Mg wires with a small addition of Zn are a perspective material for bone-support applications, such as cerclage and fixation wires
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