211 research outputs found
Disparities in allele frequencies and population differentiation for 101 disease-associated single nucleotide polymorphisms between Puerto Ricans and Non-Hispanic Whites
BACKGROUND. Variations in gene allele frequencies can contribute to differences in the prevalence of some common complex diseases among populations. Natural selection modulates the balance in allele frequencies across populations. Population differentiation (FST) can evidence environmental selection pressures. Such genetic information is limited in Puerto Ricans, the second largest Hispanic ethnic group in the US, and a group with high prevalence of chronic disease. We determined allele frequencies and population differentiation for 101 single nucleotide polymorphisms (SNPs) in 30 genes involved in major metabolic and disease-relevant pathways in Puerto Ricans (n = 969, ages 45–75 years) and compared them to similarly aged non-Hispanic whites (NHW) (n = 597). RESULTS. Minor allele frequency (MAF) distributions for 45.5% of the SNPs assessed in Puerto Ricans were significantly different from those of NHW. Puerto Ricans carried risk alleles in higher frequency and protective alleles in lower frequency than NHW. Patterns of population differentiation showed that Puerto Ricans had SNPs with exceptional FST values in intronic, non-synonymous and promoter regions. NHW had exceptional FST values in intronic and promoter region SNPs only. CONCLUSION. These observations may serve to explain and broaden studies on the impact of gene polymorphisms on chronic diseases affecting Puerto Ricans.National Institutes of Health, National Institutes on Aging (P01AG02394, P01AG023394-SI); National Insitutes of Health (53-K06-5-10); US Department of Agriculture Research Service (58-1950-9-001, 58-1950-7-707); National Institutes of Health & Heart, Lung, and Blood Institute (U 01 HL72524, Genetic and Environmental Determinants of Triglycerides, HL54776
Diode Laser-Induced Fluorescence of Xenon Ion Velocity Distributions
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/77011/1/AIAA-2005-4406-547.pd
ENVRI-FAIR - Interoperable environmental FAIR data and services for society, innovation and research
Building an Integrated Enhanced Virtual Research Environment Metadata Catalogue
Purpose
The purpose of this paper is to boost multidisciplinary research by the building of an integrated catalogue or research assets metadata. Such an integrated catalogue should enable researchers to solve problems or analyse phenomena that require a view across several scientific domains.
Design/methodology/approach
There are two main approaches for integrating metadata catalogues provided by different e-science research infrastructures (e-RIs): centralised and distributed. The authors decided to implement a central metadata catalogue that describes, provides access to and records actions on the assets of a number of e-RIs participating in the system. The authors chose the CERIF data model for description of assets available via the integrated catalogue. Analysis of popular metadata formats used in e-RIs has been conducted, and mappings between popular formats and the CERIF data model have been defined using an XML-based tool for description and automatic execution of mappings.
Findings
An integrated catalogue of research assets metadata has been created. Metadata from e-RIs supporting Dublin Core, ISO 19139, DCAT-AP, EPOS-DCAT-AP, OIL-E and CKAN formats can be integrated into the catalogue. Metadata are stored in CERIF RDF in the integrated catalogue. A web portal for searching this catalogue has been implemented.
Research limitations/implications
Only five formats are supported at this moment. However, description of mappings between other source formats and the target CERIF format can be defined in the future using the 3M tool, an XML-based tool for describing X3ML mappings that can then be automatically executed on XML metadata records. The approach and best practices described in this paper can thus be applied in future mappings between other metadata formats.
Practical implications
The integrated catalogue is a part of the eVRE prototype, which is a result of the VRE4EIC H2020 project.
Social implications
The integrated catalogue should boost the performance of multi-disciplinary research; thus it has the potential to enhance the practice of data science and so contribute to an increasingly knowledge-based society.
Originality/value
A novel approach for creation of the integrated catalogue has been defined and implemented. The approach includes definition of mappings between various formats. Defined mappings are effective and shareable.Published929-9514IT. Banche datiJCR Journa
Optimal consensus control of the Cucker-Smale model
We study the numerical realisation of optimal consensus control laws for agent-based models. For a nonlinear multi-agent system of Cucker-Smale type, consensus control is cast as a dynamic optimisation problem for which we derive first-order necessary optimality conditions. In the case of a smooth penalisation of the control energy, the optimality system is numerically approximated via a gradient-descent method. For sparsity promoting, non-smooth l1-norm control penalisations, the optimal controllers are realised by means of heuristic methods. For an increasing number of agents, we discuss the approximation of the consensus control problem by following a mean-field modelling approach
Patients’ health locus of control and preferences about the role that they want to play in the medical decision-making process
Health locus of control (HLOC) may influence people’s behavior regarding their health as well as their desires to be involved in the medical decision-making. Our study aimed to examine HLOC’s relations with people’s control preferences about the medical decision-making. A total of 153 people filled out the self-administered version of the Control Preference Scale and the Multidimensional Health Locus of Control Scale–form C. The most preferred role is the collaborative one. However, HLOC explained heterogeneity in people’s control preferences: lower scores in external HLOC were related to a greater preference for the active and the collaborative role. From the personalized medicine perspective, an accurate evaluation of the patient’s HLOC could help tailoring the decision-making process within the clinical context
Plan de mejora para disminuir el uso de contenciones mecánicas en los centros hospitalarios y sociosanitarios de Zaragoza
IntroducciĂłn: Las contenciones mecánicas son una herramienta que tiene como objetivo garantizar la seguridad de un paciente u otras personas mediante la restricciĂłn total o parcial de su movilidad, a travĂ©s de dispositivos fĂsicos. Su utilizaciĂłn es muy dispar a nivel internacional, como tambiĂ©n lo es su regulaciĂłn, en algunos casos difusa. La tĂ©cnica, conlleva riesgos fĂsicos y un importante sufrimiento para el paciente, además de deteriorar la relaciĂłn terapĂ©utica. Es por esto que, distintos organismos y asociaciones están trabajando para limitar su uso. Sumándose a estos proyectos y aportando un punto de vista enfermero, este trabajo pretende contribuir a crear una atenciĂłn sanitaria basada en la evidencia, que garantice la seguridad para profesionales y pacientes, mientras cuida su bienestar, derechos y libertades. Objetivo principal: Diseñar un plan de mejora de la calidad destinado a reducir el uso de las contenciones mecánicas en los hospitales y centros sociosanitarios de Zaragoza.MetodologĂa: Para la planificaciĂłn temporal, se ha empleado un diagrama de Gantt, que ha guiado los tiempos del trabajo. Para la bĂşsqueda de informaciĂłn, se ha realizado una revisiĂłn bibliográfica en diferentes bases de datos, páginas web y otros documentos como guĂas y protocolos oficiales. En cuanto al diseño del estudio, se ha optado por utilizar el ciclo de Deming. ConclusiĂłn: El adecuado manejo de las situaciones en las que habitualmente se utilizan contenciones no solo es posible sino necesario, mediante cambios profundos en la mentalidad y modo de trabajo y una adecuada formaciĂłn profesional, en la que enfermerĂa juega un papel fundamental. <br /
Characterization of the Taenia spp HDP2 sequence and development of a novel PCR-based assay for discrimination of Taenia saginata from Taenia asiatica
A previously described Taenia saginata HDP2 DNA sequence, a 4-kb polymorphic fragment, was previously used as the basis for developing PCR diagnostic protocols for the species-specific discrimination of T. saginata from T. solium and for the differentiation of T. saginata from T. asiatica. The latter was shown subsequently to lack the required specificity, so we undertook genetic studies of the HDP2 sequence from T. saginata and T. asiatica to determine why, and to develop a novel HDP2-PCR protocol for the simultaneous unambiguous identification of human taeniids. Sequencing and further analysis of the HDP2 DNA fragments of 19 Asiatic isolates of T. saginata and T. asiatica indicated that the HDP2 sequences of both species exhibited clear genomic variability, due to polymorphic variable fragments, that could correspond to the non-transcribed region of ribosomal DNA. This newly observed polymorphism allowed us to develop a novel, reproducible and reliable HDP2-PCR protocol which permitted the simultaneous discrimination of all T. saginata and T. asiatica isolates examined. This species-specific identification was based on, and facilitated by, the clear size difference in amplicon profiles generated: fragments of 1300 bp, 600 bp and 300 bp were produced for T. asiatica, amplicons of 1300 bp and 300 bp being obtained for T. saginata. Control T. solium samples produced one amplicon of 600 bp with the HDP2-PCR protocol. The assay has the potential to prove useful as a diagnostic tool in areas such as South East Asia where T. saginata, T. asiatica and T. solium coexist
Sexism Interacts with Patient–Physician Gender Concordance in Influencing Patient Control Preferences: Findings from a Vignette Experimental Design
Background: Patient preferences regarding their involvement in shared treatments decisions is fundamental in clinical practice. Previous evidences demonstrated a large heterogeneity in these preferences. However, only few studies have analysed the influence of patients’ individual differences, contextual and situational qualities, and their complex interaction in explaining this variability. Methods: We assessed the role of the interaction of patient’s sociodemographic and psychological factors with a physician’s gender. Specifically, we focused on patient gender and attitudes toward male or female physicians. One hundred fifty-three people participated in this randomised controlled study and were randomly assigned to one of two experimental conditions in which they were asked to imagine discussing their treatment with a male and a female doctor. Results: Analyses showed an interplay between attitude towards women and the gender of patients and doctors, explaining interindividual variability in patient preferences. Conclusions: In conclusion, patients’ attitudes toward the physicians’ gender constitutes a relevant characteristic that may influence the degree of control patients want to have and the overall patient-physician relationship
Origin of Shifts in the Surface Plasmon Resonance Frequencies for Au and Ag Nanoparticles
Origin of shifts in the surface plasmon resonance (SPR) frequency for noble
metal (Au, Ag) nanoclusters are discussed in this book chapter. Spill out of
electron from the Fermi surface is considered as the origin of red shift. On
the other hand, both screening of electrons of the noble metal in porous media
and quantum effect of screen surface electron are considered for the observed
blue shift in the SPR peak position.Comment: 37 pages, 14 Figures in the submitted book chapter of The Annual
Reviews in Plasmonics, edited by Professor Chris D. Geddes. Springer Scinec
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