Optimisation of patch distribution strategies for AMR applications

As core counts increase in the world's most powerful supercomputers, applications are becoming limited not only by computational power, but also by data availability. In the race to exascale, efficient and effective communication policies are key to achieving optimal application performance. Applications using adaptive mesh refinement (AMR) trade off communication for computational load balancing, to enable the focused computation of specific areas of interest. This class of application is particularly susceptible to the communication performance of the underlying architectures, and are inherently difficult to scale efficiently. In this paper we present a study of the effect of patch distribution strategies on the scalability of an AMR code. We demonstrate the significance of patch placement on communication overheads, and by balancing the computation and communication costs of patches, we develop a scheme to optimise performance of a specific, industry-strength, benchmark application

Effect of size and oxidation state of size-controlled rhodium nanoparticles on the aqueous-phase hydrodechlorination of 4-chlorophenol

Unsupported size-controlled Rh nanoparticles of different size and oxidation state were tested as catalysts models in aqueous phase hydrodechlorination (303-318K, 1atm) using 4-chlorophenol (4-CP) as target compound. A chemical reduction method was employed for the synthesis of the nanoparticles using methanol and poly(N-vinyl-2-pyrrolidone) (PVP) as reducing and capping agent, respectively. The size of Rh nanoparticles was in a narrow range (1.9-4.9nm) whereas Rhn+/Rh0 ratio values were found within a wide range (0.56-3.89).High 4-CP conversion values (c.a. 100%) were achieved at low Rh concentration (2.45·10-3gL-1). Phenol, cyclohexanone, cyclohexanol and traces of cyclohexane were identified as reaction products. A wide range of activity values (1.7-29.4mmolg-1min-1) were obtained, being equivalent to the measured in a previous work with unsupported Pd nanoparticles, in spite of the fact that Rh supported catalysts have generally been reported as less active than Pd ones in liquid phase hydrodechlorination. As the size of Rh nanoparticles decreased the activity increased reaching a maximum at 2.8nm, lower size values leading to a significant decrease of activity. A remarkable dependence of activity on the Rhn+/Rh0 ratio was found, thus a higher activity corresponded to a higher relative amount of zero-valent Rh in the nanoparticles samples. Regression models were developed in order to address the significance of nanoparticles size and oxidation state for the prediction of selectivity to cyclohexanone and cyclohexanol at varying reaction times. A crossed effect of particle size and Rhn+/Rh0 ratio was identified as a significant factor influencing the selectivityWe greatly appreciate financial support from the Spanish MCYT (CTQ2009-09983 and CTQ2012-32821) and CAM (REMTAVARES S-2009/AMB-1588). J.A. Baeza thanks to the Spanish MICINN a research grant (BES-2010-030059

A Hybrid Distributed Architecture for Indexing

This paper presents a hybrid scavenger grid as an underlying hardware architecture for search services within digital libraries. The hybrid scavenger grid consists of both dedicated servers and dynamic resources in the form of idle workstations to handle medium- to large-scale search engine workloads. The dedicated resources are expected to have reliable and predictable behaviour. The dynamic resources are used opportunistically without any guarantees of availability. Test results confirmed that indexing performance is directly related to the size of the hybrid grid and intranet networking does not play a major role. A system-efficiency and cost-effectiveness comparison of a grid and a multiprocessor machine showed that for workloads of modest to large sizes, the grid architecture delivers better throughput per unit cost than the multiprocessor, at a system-efficiency that is comparable to that of the multiprocessor

Macrofauna asociada al alga stypocaulon scoparium en el Estrecho de Gibraltar y comparación con el resto de la Península Ibérica

Se estudió la macrofauna asociada al alga Stypocaulon scoparium en el estrecho de Gibraltar y el resto de la península Ibérica. Se seleccionaron un total de 14 estaciones, 3 de ellas localizadas en el Estrecho y las 11 restantes distribuidas en las costas cantábricas, atlánticas y mediterráneas de la península Ibérica. En cada estación se midieron parámetros fisicoquímicos (temperatura, oxígeno disuelto, conductividad, pH y turbidez), se estimó la cobertura del alga y se recolectaron muestras de la misma en el submareal somero (1- 3 m de profundidad) mediante buceo en apnea. Se separaron e identificaron un total de 48.430 individuos pertenecientes a 16 grupos distintos de artrópodos, moluscos, anélidos y equinodermos. Atendiendo a los parámetros fisicoquímicos, los análisis de clasificación mostraron una mayor similaridad del área del Estrecho con las estaciones atlánticas. La costa mediterránea se caracterizó por una mayor temperatura y conductividad, mientras que la atlántica mostró valores más altos de oxígeno disuelto y turbidez, consecuencia un mayor oleaje. La cobertura del alga S. scoparium fue significativamente mayor en el Estrecho de Gibraltar que en las estaciones restantes y se registró una mayor diversidad de invertebrados asociados a este alga en el Estrecho que en otras zonas de la Península. Los crustáceos anfípodos fueron los más abundantes, seguidos de poliquetos y moluscos gasterópodos. El Análisis Canónico de Correspondencias (CCA) mostró que anfípodos, isópodos, quironómidos y crinoideos correlacionaron principalmente con la cobertura del alga, mientras que la abundancia de gasterópodos estuvo condicionada por la turbidez y la de los grupos restantes por la conductividad y temperatura principalmente. El estrecho d

Patrones de abundancia de la macrofauna asociada a macroalgas marinas a largo de la Península Ibérica

macroalgae were studied on a spatial scale along the Iberian Peninsula. Nineteen stations and four dominant algae were selected (intertidal zone: Corallina elongata and Asparagopsis armata; subtidal zone: Stypocaulon scoparium and Cladostephus spongiosus). Five environmental factors were also considered (seawater temperature, conductivity, dissolved oxygen, turbidity and pH). The Atlantic coast was characterized by lower temperature and conductivity as well as higher values of oxygen and turbidity than the Mediterranean coast. A total of 106274 macrofaunal specimens were sorted and examined (68% arthropods, 27% molluscs, 4% annelids and 1% echinoderms). Crustaceans were the dominant group in all the macroalgae (ca. 80% in C. elongata and A. armata, ca. 50% in S. scoparium and C. spongiosus) followed by molluscs, which were more abundant in the subtidal algae (ca. 40%) than in intertidal ones (ca.10%). Abundance patterns of macrofauna along the Iberian Peninsula were similar in the four studied algae. Most of crustaceans belonged to the order Amphipoda, which showed high densities (>1000 ind/1000 ml algae) along the whole Peninsula; isopods showed the highest abundances in the Atlantic, while tanaids, cumaceans and decapods were more abundant in the Mediterranean. Among molluscs, gasteropods showed highest abundances along the Atlantic coasts, whereas bivalves showed higher densities along the MediterraneanSe llevó a cabo un estudio espacial de los patrones de abundancia y distribución de la macrofauna asociada a macroalgas a lo largo de la Península Ibérica. Se seleccionaron 19 estaciones y 4 algas dominantes (zona intermareal: Corallina elongata y Asparagopsis armata; zona submareal: Stypocaulon scoparium y Cladostephus spongiosus). Se consideraron también cinco variables ambientales (temperatura del agua, conductividad, oxígeno disuelto, turbidez y pH). La costa atlántica se caracterizó por valores más bajos de temperatura y conductividad, y más altos de oxígeno y turbidez. Se examinaron 106274 individuos de la macrofauna (68% artrópodos, 27% moluscos, 4% anélidos y 1% equinodermos). Los crustáceos fueron dominantes en todas las macroalgas (alrededor del 80% en C. elongata y A. armata, y en torno al 50% en S. scoparium y C. spongiosus), seguidos por los moluscos, que fueron más abundantes en el submareal (40%) que en el intermareal (10%). Los patrones de abundancia de la macrofauna a lo largo de la Península Ibérica fueron similares en las cuatro algas estudiadas. La mayoría de los crustáceos pertenecieron al orden Amphipoda, que mostró densidades muy altas (>1000 ind/1000 ml alga) en toda la Península; los isópodos mostraron las mayores densidades en el Atlántico, mientras que los tanaidáceos, cumáceos y decápodos fueron más abundantes en el Mediterráneo. Entre los moluscos, los gasterópodos mostraron abundancias mayores en el Atlántico, mientras que los bivalvos dominaron en el Mediterráneo. Teniendo en cuenta que todas las estaciones seleccionadas no tenían influencia antrópica importante, los patrones de abundancia obtenidos podrían explicarse en base a diferencias naturales en la temperatura del agua, oxígeno, conductividad y turbidez, existiendo un gradiente transicional entre taxones de aguas más cálidas (del norte de Africa y del Mediterráneo) y taxones de aguas más frías (del Mar del Norte y el Ártico)

Long-Term Outcomes with Subcutaneous C1-Inhibitor Replacement Therapy for Prevention of Hereditary Angioedema Attacks

Background: For the prevention of attacks of hereditary angioedema (HAE), the efficacy and safety of subcutaneous human C1-esterase inhibitor (C1-INH[SC]; HAEGARDA, CSL Behring) was established in the 16-week Clinical Study for Optimal Management of Preventing Angioedema with Low-Volume Subcutaneous C1-Inhibitor Replacement Therapy (COMPACT). Objective: To assess the long-term safety, occurrence of angioedema attacks, and use of rescue medication with C1-INH(SC). Methods: Open-label, randomized, parallel-arm extension of COMPACT across 11 countries. Patients with frequent angioedema attacks, either study treatment-naive or who had completed COMPACT, were randomly assigned (1:1) to 40 IU/kg or 60 IU/kg C1-INH(SC) twice per week, with conditional uptitration to optimize prophylaxis (ClinicalTrials.gov registration no. NCT02316353). Results: A total of 126 patients with a monthly attack rate of 4.3 in 3 months before entry in COMPACT were enrolled and treated for a mean of 1.5 years; 44 patients (34.9%) had more than 2 years of exposure. Mean steady-state C1-INH functional activity increased to 66.6% with 60 IU/kg. Incidence of adverse events was low and similar in both dose groups (11.3 and 8.5 events per patient-year for 40 IU/kg and 60 IU/kg, respectively). For 40 IU/kg and 60 IU/kg, median annualized attack rates were 1.3 and 1.0, respectively, and median rescue medication use was 0.2 and 0.0 times per year, respectively. Of 23 patients receiving 60 IU/kg for more than 2 years, 19 (83%) were attack-free during months 25 to 30 of treatment. Conclusions: In patients with frequent HAE attacks, long-term replacement therapy with C1-INH(SC) is safe and exhibits a substantial and sustained prophylactic effect, with the vast majority of patients becoming free from debilitating disease symptoms