7,965 research outputs found
RNA secondary structure prediction using large margin methods
The secondary structure of RNA is essential for its biological role. Recently, Do, Woods, Batzoglou, (ISMB 2006) proposed a probabilistic approach that generalizes SCFGs using conditional maximum likelihood to estimate the model parameters. We propose an alternative approach to parameter estimation which is based on an SVM-like large margin method
Strongly hyperbolic second order Einstein's evolution equations
BSSN-type evolution equations are discussed. The name refers to the
Baumgarte, Shapiro, Shibata, and Nakamura version of the Einstein evolution
equations, without introducing the conformal-traceless decomposition but
keeping the three connection functions and including a densitized lapse. It is
proved that a pseudo-differential first order reduction of these equations is
strongly hyperbolic. In the same way, densitized Arnowitt-Deser-Misner
evolution equations are found to be weakly hyperbolic. In both cases, the
positive densitized lapse function and the spacelike shift vector are arbitrary
given fields. This first order pseudodifferential reduction adds no extra
equations to the system and so no extra constraints.Comment: LaTeX, 16 pages, uses revtex4. Referee corections and new appendix
added. English grammar improved; typos correcte
Nonleptonic two-body B-decays including axial-vector mesons in the final state
We present a systematic study of exclusive charmless nonleptonic two-body B
decays including axial-vector mesons in the final state. We calculate branching
ratios of B\to PA, VA and AA decays, where A, V and P denote an axial-vector, a
vector and a pseudoscalar meson, respectively. We assume naive factorization
hypothesis and use the improved version of the nonrelativistic ISGW quark model
for form factors in B\to A transitions. We include contributions that arise
from the effective \Delta B=1 weak Hamiltonian H_{eff}. The respective
factorized amplitude of these decays are explicitly showed and their penguin
contributions are classified. We find that decays B^-to a_1^0\pi^-,\barB^0\to
a_1^{\pm}\pi^{\mp}, B^-\to a_1^-\bar K^0, \bar B^0\to a_1^+K^-, \bar B^0\to
f_1\bar K^0, B^-\to f_1K^-, B^-\to K_1^-(1400)\etap, B^-\to b_1^-\bar K^{0},
and \bar B^0\to b_1^+\pi^-(K^-) have branching ratios of the order of 10^{-5}.
We also study the dependence of branching ratios for B \to K_1P(V,A) decays
(K_1=K_1(1270),K_1(1400)) with respect to the mixing angle between K_A and K_B.Comment: 28 pages, 2 tables and one reference added, notation changed in
appendices, some numerical results and abstract correcte
Exploiting gauge and constraint freedom in hyperbolic formulations of Einstein's equations
We present new many-parameter families of strongly and symmetric hyperbolic
formulations of Einstein's equations that include quite general algebraic and
live gauge conditions for the lapse. The first system that we present has 30
variables and incorporates an algebraic relationship between the lapse and the
determinant of the three metric that generalizes the densitized lapse
prescription. The second system has 34 variables and uses a family of live
gauges that generalizes the Bona-Masso slicing conditions. These systems have
free parameters even after imposing hyperbolicity and are expected to be useful
in 3D numerical evolutions. We discuss under what conditions there are no
superluminal characteristic speeds
Formulations of the 3+1 evolution equations in curvilinear coordinates
Following Brown, in this paper we give an overview of how to modify standard
hyperbolic formulations of the 3+1 evolution equations of General Relativity in
such a way that all auxiliary quantities are true tensors, thus allowing for
these formulations to be used with curvilinear sets of coordinates such as
spherical or cylindrical coordinates. After considering the general case for
both the Nagy-Ortiz-Reula (NOR) and the Baumgarte-Shapiro-Shibata-Nakamura
(BSSN) formulations, we specialize to the case of spherical symmetry and also
discuss the issue of regularity at the origin. Finally, we show some numerical
examples of the modified BSSN formulation at work in spherical symmetry.Comment: 19 pages, 12 figure
Physics at SuperB
Flavour will play a crucial role in understanding physics beyond the Standard
Model. Progress in developing a future programme to investigate this central
area of particle physics has recently passed a milestone, with the completion
of the conceptual design report for SuperB, a very high luminosity, asymmetric
e+e- collider. This article summarizes the important role of SuperB in
understanding new physics in the LHC era.Comment: 4 pages, 2 figures. To appear in the proceedings of the International
Europhysics Conference on High Energy Physics (EPS-HEP2007), Manchester,
England, 19-25 July 200
On the Estimation of Euler Equations in the Presence of a Potential Regime Shift
The concept of a peso problem is formalized in terms of a linear Euler equation and a nonlinear marginal model describing the dynamics of the exogenous driving process. It is shown that, using a threshold autoregressive model as a marginal model, it is possible to produce time-varying peso premia. A Monte Carlo method and a method based on the numerical solution of integral equations are considered as tools for computing conditional future expectations in the marginal model. A Monte Carlo study illustrates the poor performance of the generalized method of moment (GMM) estimator in small and even relatively large samples. The poor performance is particularly acute in the presence of a peso problem but is also serious in the simple linear case.peso problem; Euler equations; GMM; threshold autoregressive models
Improved Determination of the CKM Angle alpha from B to pi pi decays
Motivated by a recent paper that compares the results of the analysis of the
CKM angle alpha in the frequentist and in the Bayesian approaches, we have
reconsidered the information on the hadronic amplitudes, which helps
constraining the value of alpha in the Standard Model. We find that the
Bayesian method gives consistent results irrespective of the parametrisation of
the hadronic amplitudes and that the results of the frequentist and Bayesian
approaches are equivalent when comparing meaningful probability ranges or
confidence levels. We also find that from B to pi pi decays alone the 95%
probability region for alpha is the interval [80^o,170^o], well consistent with
recent analyses of the unitarity triangle where, by using all the available
experimental and theoretical information, one gets alpha = (93 +- 4)^o. Last
but not least, by using simple arguments on the hadronic matrix elements, we
show that the unphysical region alpha ~ 0, present in several experimental
analyses, can be eliminated.Comment: 16 pages, 7 figure
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