Hamiltonian reductions of free particles under polar actions of compact Lie groups

Classical and quantum Hamiltonian reductions of free geodesic systems of complete Riemannian manifolds are investigated. The reduced systems are described under the assumption that the underlying compact symmetry group acts in a polar manner in the sense that there exist regularly embedded, closed, connected submanifolds meeting all orbits orthogonally in the configuration space. Hyperpolar actions on Lie groups and on symmetric spaces lead to families of integrable systems of spin Calogero-Sutherland type.Comment: 15 pages, minor correction and updated references in v

Interrogating and Predicting Tolerated Sequence Diversity in Protein Folds: Application to E. elaterium Trypsin Inhibitor-II Cystine-Knot Miniprotein

Cystine-knot miniproteins (knottins) are promising molecular scaffolds for protein engineering applications. Members of the knottin family have multiple loops capable of displaying conformationally constrained polypeptides for molecular recognition. While previous studies have illustrated the potential of engineering knottins with modified loop sequences, a thorough exploration into the tolerated loop lengths and sequence space of a knottin scaffold has not been performed. In this work, we used the Ecballium elaterium trypsin inhibitor II (EETI) as a model member of the knottin family and constructed libraries of EETI loop-substituted variants with diversity in both amino acid sequence and loop length. Using yeast surface display, we isolated properly folded EETI loop-substituted clones and applied sequence analysis tools to assess the tolerated diversity of both amino acid sequence and loop length. In addition, we used covariance analysis to study the relationships between individual positions in the substituted loops, based on the expectation that correlated amino acid substitutions will occur between interacting residue pairs. We then used the results of our sequence and covariance analyses to successfully predict loop sequences that facilitated proper folding of the knottin when substituted into EETI loop 3. The sequence trends we observed in properly folded EETI loop-substituted clones will be useful for guiding future protein engineering efforts with this knottin scaffold. Furthermore, our findings demonstrate that the combination of directed evolution with sequence and covariance analyses can be a powerful tool for rational protein engineering

Astrocytes convert network excitation to tonic inhibition of neurons

<p>Abstract</p> <p>Background</p> <p>Glutamate and γ-aminobutyric acid (GABA) transporters play important roles in balancing excitatory and inhibitory signals in the brain. Increasing evidence suggest that they may act concertedly to regulate extracellular levels of the neurotransmitters.</p> <p>Results</p> <p>Here we present evidence that glutamate uptake-induced release of GABA from astrocytes has a direct impact on the excitability of pyramidal neurons in the hippocampus. We demonstrate that GABA, synthesized from the polyamine putrescine, is released from astrocytes by the reverse action of glial GABA transporter (GAT) subtypes GAT-2 or GAT-3. GABA release can be prevented by blocking glutamate uptake with the non-transportable inhibitor DHK, confirming that it is the glutamate transporter activity that triggers the reversal of GABA transporters, conceivably by elevating the intracellular Na⁺concentration in astrocytes. The released GABA significantly contributes to the tonic inhibition of neurons in a network activity-dependent manner. Blockade of the Glu/GABA exchange mechanism increases the duration of seizure-like events in the low-[Mg²⁺] <it>in vitro </it>model of epilepsy. Under <it>in vivo </it>conditions the increased GABA release modulates the power of gamma range oscillation in the CA1 region, suggesting that the Glu/GABA exchange mechanism is also functioning in the intact hippocampus under physiological conditions.</p> <p>Conclusions</p> <p>The results suggest the existence of a novel molecular mechanism by which astrocytes transform glutamat<it>ergic </it>excitation into GABA<it>ergic </it>inhibition providing an adjustable, <it>in situ </it>negative feedback on the excitability of neurons.</p

Evaluation of the quality of Sorbus fruits belonging to different species

The interest in wild growing fruits was increased considerably by the pharmaceutical industry, the cosmetics as well as by the food industry. (Stefanovits-Bányai et al., 2004). Elderberry (Sambucus nigra L), sand thorn (Hippophae rhamnoides L.), cornet (Cornus mas L.), dog rose (Rosa canina L. bearing hips) and the Sorbus species (Sorhus ssp.) have been well known medicinal and/or ornamental plants since long. Recently, precious substances have been detected in their fruits, which are indispensable in healthy foods. Several species and micro-species of the genus Sorbus are components of the native flora of Hungary, and the fruit of some of them have been consumed traditionally, however, they are preferably considered as ornamentals. The nursery of Alsótekeres (Balatonvilágos) maintained some 16 clones of Sorbus species, which are mainly apomictic "micro species" of. the collection. In 2003, a comprehensive analysis of sorb fruits born on apomictic micro species was initiated in order to find those, which will be suitable to establish plantations. It turned out that considerable differences exist between the fruits of individual taxa, however, it is largely influenced by seasonal effects. According to physical measurements, a scale of mean fruit masses could be established. As for chemical ingredients of the fruits, those are of special interest, which are involved mainly in anti-oxidant activities of the organisms (calcium, potash, phosphorus, copper, magnesium)

Evaluation of the quality of Sorbus fruits belonging to different species

The interest in wild growing fruits was increased considerably by the pharmaceutical industry, the cosmetics as well as by the food industry. (Stefanovits-Bányai et al., 2004). Elderberry (Sambucus nigra L), sand thorn (Hippophae rhamnoides L.), cornet (Cornus mas L.), dog rose (Rosa canina L. bearing hips) and the Sorbus species (Sorhus ssp.) have been well known medicinal and/or ornamental plants since long. Recently, precious substances have been detected in their fruits, which are indispensable in healthy foods. Several species and micro-species of the genus Sorbus are components of the native flora of Hungary, and the fruit of some of them have been consumed traditionally, however, they are preferably considered as ornamentals. The nursery of Alsótekeres (Balatonvilágos) maintained some 16 clones of Sorbus species, which are mainly apomictic "micro species" of. the collection. In 2003, a comprehensive analysis of sorb fruits born on apomictic micro species was initiated in order to find those, which will be suitable to establish plantations. It turned out that considerable differences exist between the fruits of individual taxa, however, it is largely influenced by seasonal effects. According to physical measurements, a scale of mean fruit masses could be established. As for chemical ingredients of the fruits, those are of special interest, which are involved mainly in anti-oxidant activities of the organisms (calcium, potash, phosphorus, copper, magnesium)

Influence of strawberry and raspberry consumption on the antioxidant status of human body

Several parameters influencing the antioxidant capacity were measured in our experiments to compare strawberry and raspberry cultivars. The analysed cultivars were: 'Honeoye', 'Elsanta', 'Onebor (strawberries) and 'Glen Ample', Fertődi zamatos', 'Mailing Expoit' (raspberries). Besides the determination of dry matter content the content of glucose, fructose, total phenol and anthocyanine, the reducing power, H-donating activity and total scavenger capacity were measured as well as the compound of mineral nutrients. Among the species and the cultivars, differences were obtained. These results call the attention to the features of cultivars and to count on the antioxidant-capacity describing values in case of consuming these fruits. In early spring and summer the consumption of strawberry and raspberry has a beneficial contribution to the antioxidant status of our body. In this respect these are more valuable than the year-long consumable apple. Accordingly, our measurements showed higher amount of sucrose, phenolic compounds and anthocyanine in raspberries, but strawberries contained more glucose and fructose and had stronger H-donating activity. It is worth to keep in mind that e.g. which cultivar contains more of certain compounds because of the strictly determined allowable dose in some diseases (e.g. diabetes)