Modelling the Effect of Breakeven Date in Spring Rotation Planner on Production and Profit of a Pasture-Based Dairy System

The breakeven date is the expected date when pasture supply exceeds cow demand. This date is used to plan the rotation rates, slow during the winter, when pasture growth is low and cows are dry, to a fast rotation in spring, when growth is accelerating and most cows lactating. This date is influenced by regional climate, mainly rainfall and soil temperature, which affects timing and rate of growth acceleration. The objective of this modeling exercise was to explore the effect of the breakeven date on milksolids (MS), grass silage, farm cover and economic farm surplus (EFS) over different climate years for the Canterbury region of New Zealand

Effective Treatment of Respiratory Alphaherpesvirus Infection Using RNA Interference

BACKGROUND: Equine herpesvirus type 1 (EHV-1), a member of the Alphaherpesvirinae, is spread via nasal secretions and causes respiratory disease, neurological disorders and abortions. The virus is a significant equine pathogen, but current EHV-1 vaccines are only partially protective and effective metaphylactic and therapeutic agents are not available. Small interfering RNAs (siRNA's), delivered intranasally, could prove a valuable alternative for infection control. siRNA's against two essential EHV-1 genes, encoding the viral helicase (Ori) and glycoprotein B, were evaluated for their potential to decrease EHV-1 infection in a mouse model. METHODOLOGY/PRINCIPAL FNDINGS: siRNA therapy in vitro significantly reduced virus production and plaque size. Viral titers were reduced 80-fold with 37.5 pmol of a single siRNA or with as little as 6.25 pmol of each siRNA when used in combination. siRNA therapy in vivo significantly reduced viral replication and clinical signs. Intranasal treatment did not require a transport vehicle and proved effective when given up to 12 h before or after infection. CONCLUSIONS/SIGNIFICANCE: siRNA treatment has potential for both prevention and early treatment of EHV-1 infections

Bone histomorphometric measures of physical activity in children from Medieval England

Objectives: Histomorphometric studies show consistent links between physical activity patterns and the microstructure underlying the size and shape of bone. Here we adopt a combined bone approach to explore variation in microstructure of ribs and humeri related to physical activity and historical records of manual labor in skeletal samples of children (n=175) from medieval England. The humerus reflects greater biomechanically induced microstructural variation than the rib which is used here as a control. Variation in microstructure is sought between regions in England (Canterbury, York, Newcastle), and between high- and low-status children from Canterbury. Materials and Methods: Thin-sections were prepared from the humerus or rib and features of bone remodeling were recorded using high-resolution microscopy and image analysis software. Results: The density and size of secondary osteons in the humerus differed significantly in children from Canterbury when compared to those from York and Newcastle. Amongst the older children, secondary osteon circularity and diameter differed significantly between higher and lower status children. Discussion: By applying bone remodeling principles to the histomorphometric data we infer that medieval children in Canterbury engaged in less physically demanding activities than children from York or Newcastle. Within Canterbury, high-status and low-status children experienced similar biomechanical loading until around seven years of age. After this age low-status children performed activities that resulted in more habitual loading on their arm bones than the high-status children. This inferred change in physical activity is consistent with historical textual evidence that describes children entering the work force at this age

siRNAs: Potential therapeutic agents against Hepatitis C Virus

Hepatitis C virus is a major cause of chronic liver diseases which can lead to permanent liver damage, hepatocellular carcinoma and death. The presently available treatment with interferon plus ribavirin, has limited benefits due to adverse side effects such as anemia, depression and "flu-like" symptoms. Needless to mention, the effectiveness of interferon therapy is predominantly, if not exclusively, limited to virus type 3a and 3b whereas in Europe and North America the majority of viral type is 1a and 2a. Due to the limited efficiency of current therapy, RNA interference (RNAi) a novel regulatory and powerful silencing approach for molecular therapeutics through a sequence-specific RNA degradation process represents an alternative option. Several reports have indicated the efficiency and specificity of synthetic and vector based siRNAs inhibiting HCV replication. In the present review, we focused that combination of siRNAs against virus and host genes will be a better option to treat HC

Herpes Simplex Virus Type 2 Triggers Reactivation of Kaposi's Sarcoma-Associated Herpesvirus from Latency and Collaborates with HIV-1 Tat

Kaposi's sarcoma-associated herpesvirus (KSHV) infection was necessary but not sufficient for Kaposi's sarcoma (KS) development without other cofactors. Previously, we identified that both human immunodeficiency type 1 (HIV-1) Tat and herpes simplex virus 1 (HSV-1) were important cofactors reactivating KSHV from latency. Here, we further investigated the potential of herpes simplex virus 2 (HSV-2) to influence KSHV replication and examined the role of Tat in this procedure. We demonstrated that HSV-2 was a potentially important factor in the pathogenesis of KS, as determined by production of lytic phase mRNA transcripts, viral proteins and infectious viral particles in BCBL-1 cells. These results were further confirmed by an RNA interference experiment using small interfering RNA targeting KSHV Rta and a luciferase reporter assay testing Rta promoter-driven luciferase activity. Mechanistic studies showed that HSV-2 infection activated nuclear factor-kappa B (NF-κB) signaling pathway. Inhibition of NF-κB pathway enhanced HSV-2-mediated KSHV activation, whereas activation of NF-κB pathway suppressed KSHV replication in HSV-2-infected BCBL-1 cells. Additionally, ectopic expression of Tat enhanced HSV-2-induced KSHV replication. These novel findings suggest a role of HSV-2 in the pathogenesis of KS and provide the first laboratory evidence that Tat may participate HSV-2-mediated KSHV activation, implying the complicated pathogenesis of acquired immunodeficiency syndrome (AIDS)-related KS (AIDS-KS) patients

Applying differential evolution to a whole-farm model to assist optimal strategic decision making

A whole-farm model of a dairy farm was optimised to assist the strategic decision making given the uncertain environment. Decisions under consideration included the stocking rate, the calving pattern (defined by calving and dry-off dates) and the use of supplementary feed. These individual decisions are considered as the choice of a farm system in this paper. The farmer’s decision making problem is simplified by assuming a perfect labour market, and so the farmer will be primarily concerned with the return on equity. Farm systems are compared with stochastic dominance or the Sharpe ratio, depending on whether there is a perfect capital market and returns are normally distributed.Mark’s PhD was partly funded by a Dairy Australia scholarship

Estimating health risks to water users: Marrying hydrodynamic models and risk models

Epidemiological studies show that discharges of treated human and animal wastes to receiving waters are associated with elevated health risks both to recreational water users and to consumers of raw shellfish. Those studies have relied almost exclusively on faecal indicator bacteria, indicating the potential degree of pathogenicity of the affected waters. However, many receiving waters are substantially different in character from those covered by epidemiological studies. To account for that, QMRA (Quantitative Microbial Risk Assessment) techniques, based on particular pathogens and their dose-response characteristics, are increasingly being used in New Zealand to directly assess the health impacts of wastewater schemes. They have been used to study not only existing infrastructure but also a number of possible alternatives and so are now well-regarded by commissioners hearing permit applications. For coastal discharges QMRA models must generally be married with hydrodynamic models. We present case studies from several outfalls to demonstrate the uses of QMRA, how these can inform understanding of potential health risk to water users, and discuss information/research gaps. Given that coastal QMRA exercises focus on the sources of contamination (and use hydrodynamic models to convey the contaminants to points of exposure), the need for source load minimisation is a natural outcome of the assessment.</jats:p