Transcriptional Activation of Biosynthetic Gene Clusters in Filamentous Fungi

Filamentous fungi are highly productive cell factories, many of which are industrial producers of enzymes, organic acids, and secondary metabolites. The increasing number of sequenced fungal genomes revealed a vast and unexplored biosynthetic potential in the form of transcriptionally silent secondary metabolite biosynthetic gene clusters (BGCs). Various strategies have been carried out to explore and mine this untapped source of bioactive molecules, and with the advent of synthetic biology, novel applications, and tools have been developed for filamentous fungi. Here we summarize approaches aiming for the expression of endogenous or exogenous natural product BGCs, including synthetic transcription factors, assembly of artificial transcription units, gene cluster refactoring, fungal shuttle vectors, and platform strains

On the hadronic contribution to sterile neutrino production

Sterile neutrinos with masses in the keV range are considered to be a viable candidate for warm dark matter. The rate of their production through active-sterile neutrino transitions peaks, however, at temperatures of the order of the QCD scale, which makes it difficult to estimate their relic abundance quantitatively, even if the mass of the sterile neutrino and its mixing angle were known. We derive here a relation, valid to all orders in the strong coupling constant, which expresses the production rate in terms of the spectral function associated with active neutrinos. The latter can in turn be expressed as a certain convolution of the spectral functions related to various mesonic current-current correlation functions, which are being actively studied in other physics contexts. In the naive weak coupling limit, the appropriate Boltzmann equations can be derived from our general formulae.Comment: 28 pages. v2: small clarifications added, published versio

Lasing from single, stationary, dye-doped glycerol/water microdroplets located on a superhydrophobic surface

We report laser emission from single, stationary, Rhodamine B-doped glycerol/water microdroplets located on a superhydrophobic surface. In the experiments, a pulsed, frequency-doubled Nd:YAG laser operating at 532 nm was used as the excitation source. The microdroplets ranged in diameter from a few to 20 um. Lasing was achieved in the red-shifted portion of the dye emission spectrum with threshold fluences as low as 750 J/cm2. Photobleaching was observed when the microdroplets were pumped above threshold. In certain cases, multimode lasing was also observed and attributed to the simultaneous lasing of two modes belonging to different sets of whispering gallery modes.Comment: to appear in Optics Communication

Author Correction:CRISPR-based transcriptional activation tool for silent genes in filamentous fungi (Scientific Reports, (2021), 11, 1, (1118), 10.1038/s41598-020-80864-3)

The Supplementary Information published with this Article contained errors. In Note S2, the text formatting including green italics, red bold, yellow underline, purple text and blue underline was omitted. The original Supplementary Information file is provided below. These errors have now been corrected in the Supplementary Information file that accompanies the original Article

Color conductivity and ladder summation in hot QCD

The color conductivity is computed at leading logarithmic order using a Kubo formula. We show how to sum an infinite series of planar ladder diagrams, assuming some approximations based on the dominance of soft scattering processes between hard particles in the plasma. The result agrees with the one obtained previously from a kinetical approach.Comment: 15 pages, 4 figures. Explanations enlarged, two figures and some refs added, typos corrected. Final version to be published in Phys.Rev.

Resummations of free energy at high temperature

We discuss resummation strategies for free energy in quantum field theories at nonzero temperatures T. We point out that resummations should be performed for the short- and long-distance parts separately in order to avoid spurious interference effects and double-counting. We then discuss and perform Pade resummations of these two parts for QCD at high T. The resummed results are almost invariant under variation of the renormalization and factorization scales. We perform the analysis also in the case of the massless scalar $\phi^4$ theory.Comment: 16 pages, revtex4, 15 eps-figures; minor typographic errors corrected; the version as it appears in Phys.Rev.

Study of Effect on Teeth of Intermittent Fluoridation of a Community Water Supply

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/67913/2/10.1177_00220345530320011601.pd

Towards a Nonequilibrium Quantum Field Theory Approach to Electroweak Baryogenesis

We propose a general method to compute $CP$-violating observables from extensions of the standard model in the context of electroweak baryogenesis. It is alternative to the one recently developed by Huet and Nelson and relies on a nonequilibrium quantum field theory approach. The method is valid for all shapes and sizes of the bubble wall expanding in the thermal bath during a first-order electroweak phase transition. The quantum physics of $CP$-violation and its suppression coming from the incoherent nature of thermal processes are also made explicit.Comment: 19 pages, 1 figure available upon e-mail reques

Recent advances in neutrinoless double beta decay search

Even after the discovery of neutrino flavour oscillations, based on data from atmospheric, solar, reactor, and accelerator experiments, many characteristics of the neutrino remain unknown. Only the neutrino square-mass differences and the mixing angle values have been estimated, while the value of each mass eigenstate still hasn't. Its nature (massive Majorana or Dirac particle) is still escaping. Neutrinoless double beta decay ($0\nu$-DBD) experimental discovery could be the ultimate answer to some delicate questions of elementary particle and nuclear physics. The Majorana description of neutrinos allows the $0\nu$-DBD process, and consequently either a mass value could be measured or the existence of physics beyond the standard should be confirmed without any doubt. As expected, the $0\nu$-DBD measurement is a very difficult field of application for experimentalists. In this paper, after a short summary of the latest results in neutrino physics, the experimental status, the R&D projects, and perspectives in $0\nu$-DBD sector are reviewed.Comment: 36 pages, 7 figures, To be publish in Czech Journal of Physic

Dynamical renormalization group approach to transport in ultrarelativistic plasmas: the electrical conductivity in high temperature QED

The DC electrical conductivity of an ultrarelativistic QED plasma is studied in real time by implementing the dynamical renormalization group. The conductivity is obtained from the realtime dependence of a dissipative kernel related to the retarded photon polarization. Pinch singularities in the imaginary part of the polarization are manifest as growing secular terms that in the perturbative expansion of this kernel. The leading secular terms are studied explicitly and it is shown that they are insensitive to the anomalous damping of hard fermions as a result of a cancellation between self-energy and vertex corrections. The resummation of the secular terms via the dynamical renormalization group leads directly to a renormalization group equation in real time, which is the Boltzmann equation for the (gauge invariant) fermion distribution function. A direct correspondence between the perturbative expansion and the linearized Boltzmann equation is established, allowing a direct identification of the self energy and vertex contributions to the collision term.We obtain a Fokker-Planck equation in momentum space that describes the dynamics of the departure from equilibrium to leading logarithmic order in the coupling.This determines that the transport time scale is given by t_{tr}=(24 pi)/[e^4 T \ln(1/e)}]. The solution of the Fokker-Planck equation approaches asymptotically the steady- state solution as sim e^{-t/(4.038 t_{tr})}.The steady-state solution leads to the conductivity sigma = 15.698 T/[e^2 ln(1/e)] to leading logarithmic order. We discuss the contributions beyond leading logarithms as well as beyond the Boltzmann equation. The dynamical renormalization group provides a link between linear response in quantum field theory and kinetic theory.Comment: LaTex, 48 pages, 14 .ps figures, final version to appear in Phys. Rev.