Goldilocks mixing in oceanic shear-induced turbulent overturns

We present a new, simple and physically motivated parameterization, based on the ratio of Thorpe and Ozmidov scales, for the irreversible turbulent flux coefficient ΓM=M/ϵ , i.e. the ratio of the irreversible rate M at which the background potential energy increases in a stratified flow due to macroscopic motions to the dissipation rate of turbulent kinetic energy ϵ . Our parameterization covers all three key phases (crucially, in time) of a shear-induced stratified turbulence life cycle: the initial, ‘hot’ growing phase, the intermediate energetically forced phase and the final ‘cold’ fossilization decaying phase. Covering all three phases allows us to highlight the importance of the intermediate one, to which we refer as the ‘Goldilocks’ phase due to its apparently optimal (and so neither too hot nor too cold, but just right) balance, in which energy transfer from background shear to the turbulent mixing is most efficient. The value of ΓM is close to 1/3 during this phase, which we demonstrate appears to be related to an adjustment towards a critical or marginal Richardson number for sustained turbulence ∼0.2--0.25 . Importantly, although buoyancy effects are still significant at leading order for the turbulent dynamics during this intermediate phase, the marginal balance in the flow ensures that the turbulent mixing of the (density) scalar is nevertheless effectively ‘locked’ to the turbulent mixing of momentum. We present supporting evidence for our parameterization through comparison with six oceanographic datasets that span various turbulence generation regimes and a wide range of geographical location and depth. Using these observations, we highlight the significance of parameterizing an inherently variable flux coefficient for capturing the turbulent flux associated with rare energetic, yet fundamentally shear-driven (and so not strongly stratified) overturns that make a disproportionate contribution to the total mixing. We also highlight the importance of representation of young turbulent patches in the parameterization for connecting the small scale physics to larger scale applications of mixing such as ocean circulation and tracer budgets. Shear-induced turbulence is therefore central to irreversible mixing in the world's oceans, apparently even close to the seafloor, and it is critically important to appreciate the inherent time dependence and evolution of mixing events: history matters to mixing

Estimating Dissipation Rates Associated With Double Diffusion

Abstract: Double diffusion refers to a variety of turbulent processes in which potential energy is released into kinetic energy, made possible in the ocean by the difference in molecular diffusivities between salinity and temperature. Here, we present a new method for estimating the kinetic energy dissipation rates forced by double‐diffusive convection using temperature and salinity data alone. The method estimates the up‐gradient diapycnal buoyancy flux associated with double diffusion, which is hypothesized to balance the dissipation rate. To calculate the temperature and salinity gradients on small scales we apply a canonical scaling for compensated thermohaline variance (or ‘spice’) on sub‐measurement scales with a fixed buoyancy gradient. Our predicted dissipation rates compare favorably with microstructure measurements collected in the Chukchi Sea. Fine et al. (2018), https://doi.org/10.1175/jpo-d-18-0028.1, showed that dissipation rates provide good estimates for heat fluxes in this region. Finally, we show the method maintains predictive skill when applied to a sub‐sampling of the Conductivity, Temperature, Depth (CTD) data

Quantum Field Theoretic Description of Matter in the Universe

Quantum field theory at finite temperature and density can be used for describing the physics of relativistic plasmas. Such systems are frequently encountered in astrophysical situations, such as the early Universe, Supernova explosions, and the interior of neutron stars. After a brief introduction to thermal field theory the usefulness of this approach in astrophysics will be exemplified in three different cases. First the interaction of neutrinos within a Supernova plasma will be discussed. Then the possible presence of quark matter in a neutron star core and finally the interaction of light with the Cosmic Microwave Background will be considered.Comment: 7 pages, 9 figures, to be published in the Proceedings of the ISSI Workshop "Matter in the Universe" (Bern, March 19-23, 2001), misprints correcte

Regulation of mammary gland branching morphogenesis by the extracellular matrix and its remodeling enzymes.

A considerable body of research indicates that mammary gland branching morphogenesis is dependent, in part, on the extracellular matrix (ECM), ECM-receptors, such as integrins and other ECM receptors, and ECM-degrading enzymes, including matrix metalloproteinases (MMPs) and their inhibitors, tissue inhibitors of metalloproteinases (TIMPs). There is some evidence that these ECM cues affect one or more of the following processes: cell survival, polarity, proliferation, differentiation, adhesion, and migration. Both three-dimensional culture models and genetic manipulations of the mouse mammary gland have been used to study the signaling pathways that affect these processes. However, the precise mechanisms of ECM-directed mammary morphogenesis are not well understood. Mammary morphogenesis involves epithelial 'invasion' of adipose tissue, a process akin to invasion by breast cancer cells, although the former is a highly regulated developmental process. How these morphogenic pathways are integrated in the normal gland and how they become dysregulated and subverted in the progression of breast cancer also remain largely unanswered questions

ERK Is Involved in the Reorganization of Somatosensory Cortical Maps in Adult Rats Submitted to Hindlimb Unloading

Sensorimotor restriction by a 14-day period of hindlimb unloading (HU) in the adult rat induces a reorganization of topographic maps and receptive fields. However, the underlying mechanisms are still unclear. Interest was turned towards a possible implication of intracellular MAPK signaling pathway since Extracellular-signal-Regulated Kinase 1/2 (ERK1/2) is known to play a significant role in the control of synaptic plasticity. In order to better understand the mechanisms underlying cortical plasticity in adult rats submitted to a sensorimotor restriction, we analyzed the time-course of ERK1/2 activation by immunoblot and of cortical reorganization by electrophysiological recordings, on rats submitted to hindlimb unloading over four weeks. Immunohistochemistry analysis provided evidence that ERK1/2 phosphorylation was increased in layer III neurons of the somatosensory cortex. This increase was transient, and parallel to the changes in hindpaw cortical map area (layer IV). By contrast, receptive fields were progressively enlarged from 7 to 28 days of hindlimb unloading. To determine whether ERK1/2 was involved in cortical remapping, we administered a specific ERK1/2 inhibitor (PD-98059) through osmotic mini-pump in rats hindlimb unloaded for 14 days. Results demonstrate that focal inhibition of ERK1/2 pathway prevents cortical reorganization, but had no effect on receptive fields. These results suggest that ERK1/2 plays a role in the induction of cortical plasticity during hindlimb unloading

Biogeochemical, isotopic and bacterial distributions trace oceanic abyssal circulation

We explore the possibility of tracing routes of dense waters toward and within the ocean abyss by the use of an extended set of observed physical and biochemical parameters. To this purpose, we employ mercury, isotopic oxygen, biopolymeric carbon and its constituents, together with indicators of microbial activity and bacterial diversity found in bottom waters of the Eastern Mediterranean. In this basin, which has been considered as a miniature global ocean, two competing sources of bottom water (one in the Adriatic and one in the Aegean seas) contribute to the ventilation of the local abyss. However, due to a recent substantial reduction of the differences in the physical characteristics of these two water masses it has become increasingly complex a water classification using the traditional approach with temperature, salinity and dissolved oxygen alone. Here, we show that an extended set of observed physical and biochemical parameters allows recognizing the existence of two different abyssal routes from the Adriatic source and one abyssal route from the Aegean source despite temperature and salinity of such two competing sources of abyssal water being virtually indistinguishable. Moreover, as the near-bottom development of exogenous bacterial communities transported by convectively-generated water masses in the abyss can provide a persistent trace of episodic events, intermittent flows like those generating abyssal waters in the Eastern Mediterranean basin may become detectable beyond the availability of concomitant measurements.We explore the possibility of tracing routes of dense waters toward and within the ocean abyss by the use of an extended set of observed physical and biochemical parameters. To this purpose, we employ mercury, isotopic oxygen, biopolymeric carbon and its constituents, together with indicators of microbial activity and bacterial diversity found in bottom waters of the Eastern Mediterranean. In this basin, which has been considered as a miniature global ocean, two competing sources of bottom water (one in the Adriatic and one in the Aegean seas) contribute to the ventilation of the local abyss. However, due to a recent substantial reduction of the differences in the physical characteristics of these two water masses it has become increasingly complex a water classification using the traditional approach with temperature, salinity and dissolved oxygen alone. Here, we show that an extended set of observed physical and biochemical parameters allows recognizing the existence of two different abyssal routes from the Adriatic source and one abyssal route from the Aegean source despite temperature and salinity of such two competing sources of abyssal water being virtually indistinguishable. Moreover, as the near-bottom development of exogenous bacterial communities transported by convectively-generated water masses in the abyss can provide a persistent trace of episodic events, intermittent flows like those generating abyssal waters in the Eastern Mediterranean basin may become detectable beyond the availability of concomitant measurements. © 2016 Rubino et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

Influenza Virus in Human Exhaled Breath: An Observational Study

Background: Recent studies suggest that humans exhale fine particles during tidal breathing but little is known of their composition, particularly during infection. Methodology/Principal Findings: We conducted a study of influenza infected patients to characterize influenza virus and particle concentrations in their exhaled breath. Patients presenting with influenza-like-illness, confirmed influenza A or B virus by rapid test, and onset within 3 days were recruited at three clinics in Hong Kong, China. We collected exhaled breath from each subject onto Teflon filters and measured exhaled particle concentrations using an optical particle counter. Filters were analyzed for influenza A and B viruses by quantitative polymerase chain reaction (qPCR). Twelve out of thirteen rapid test positive patients provided exhaled breath filter samples (7 subjects infected with influenza B virus and 5 subjects infected with influenza A virus). We detected influenza virus RNA in the exhaled breath of 4 (33%) subjects-three (60%) of the five patients infected with influenza A virus and one (14%) of the seven infected with influenza B virus. Exhaled influenza virus RNA generation rates ranged from <3.2 to 20 influenza virus RNA particles per minute. Over 87% of particles exhaled were under 1 μm in diameter. Conclusions: These findings regarding influenza virus RNA suggest that influenza virus may be contained in fine particles generated during tidal breathing, and add to the body of literature suggesting that fine particle aerosols may play a role in influenza transmission. © 2008 Fabian et al.published_or_final_versio

Identification of modifiable factors associated with owner-reported equine laminitis in Britain using a web-based cohort study approach

Equine laminitis is a complex disease that manifests as pain and lameness in the feet, often with debilitating consequences. There is a paucity of data that accounts for the multifactorial nature of laminitis and considers time-varying covariates that may be associated with disease development; particularly those that are modifiable and present potential interventions. A previous case-control study identified a number of novel, modifiable factors associated with laminitis which warranted further investigation and corroboration. The aim of this study was to identify factors associated with equine laminitis in horses/ponies in Great Britain (GB) using a prospective, web-based cohort study design, with particular interest in evaluating modifiable factors previously identified in the case-control study

Clinical practice: Breastfeeding and the prevention of allergy

The increase in allergic disease prevalence has led to heightened interest in the factors determining allergy risk, fuelled by the hope that by influencing these factors one could reduce the prevalence of allergic conditions. The most important modifiable risk factors for allergy are maternal smoking behaviour and the type of feeding. A smoke-free environment for the child (to be), exclusive breastfeeding for 4–6 months and the postponement of supplementary feeding (solids) until 4 months of age are the main measures considered effective. There is no place for restricted diets during pregnancy or lactation. Although meta-analyses suggest that hypoallergenic formula after weaning from breastfeeding grants protection against the development of allergic disease, the evidence is limited and weak. Moreover, all current feeding measures aiming at allergy prevention fail to show effects on allergic manifestations later in life, such as asthma. In conclusion, the allergy preventive effect of dietary interventions in infancy is limited. Counselling of future parents on allergy prevention should pay attention to these limitations