The impact of ocean biogeochemistry on physics and its consequences for modelling shelf seas

We use modelling and assimilation tools to explore the impact of biogeochemistry on physics in the shelf sea environment, using North-West European Shelf (NWES) as a case study. We demonstrate that such impact is significant: the attenuation of light by biogeochemical substances heats up the upper 20 m of the ocean by up to 1 °C and by a similar margin cools down the ocean within the 20–200 m range of depths. We demonstrate that these changes to sea temperature influence mixing in the upper ocean and feed back into marine biology by influencing the timing of the phytoplankton bloom, as suggested by the critical turbulence hypothesis. We compare different light schemes representing the impact of biogeochemistry on physics, and show that the physics is sensitive to both the spectral resolution of radiances and the represented optically active constituents. We introduce a new development into the research version of the operational model for the NWES, in which we calculate the heat fluxes based on the spectrally resolved attenuation by the simulated biogeochemical tracers, establishing a two-way coupling between biogeochemistry and physics. We demonstrate that in the late spring–summer the two-way coupled model increases heating in the upper oceanic layer compared to the existing model and improves by 1–3 days the timing of the simulated phytoplankton bloom. This improvement is relatively small compared with the existing model bias in bloom timing, but is sufficient to have a visible impact on model skill in the free run. We also validate the skill of the two-way coupling in the context of the weakly coupled physical–biogeochemical assimilation currently used for operational forecasting of the NWES. We show that the change to the skill is negligible for analyses, but it remains to be seen how much it differs for the forecasts

The Impact of Dementia on Women Internationally: an Integrative Review

Women are disproportionately affected by dementia, both in terms of developing dementia and becoming caregivers. We conducted an integrative review of English language literature of the issues affecting women in relation to dementia from an international perspective. The majority of relevant studies were conducted in high income countries, and none were from low-income countries. The effects of caregiving on health, wellbeing and finances are greater for women; issues facing women, particularly in low and middle-income countries need to be better understood. Research should focus on building resilience to help people adjust and cope long term

Copernicus Ocean State Report, issue 6

The 6th issue of the Copernicus OSR incorporates a large range of topics for the blue, white and green ocean for all European regional seas, and the global ocean over 1993–2020 with a special focus on 2020

Supplementary File for Capturing wheat phenotypes at the genome level

Supplementary S1: Yield and related traits in bread wheat. Table S1: Examples of genomic regions, candidate and cloned genes for yield and related traits in bread wheat. Supplementary S2: Drought tolerance. Table S2: Examples of genomic regions and candidate genes for drought tolerance. Supplementary S3: Heat tolerance. Table S3. Examples of genomic regions and candidate genes for heat tolerance. Supplementary S4: salinity tolerance in bread wheat. Table S4. Examples of genomic regions and candidate genes for salinity tolerance in bread wheat. Supplementary S5: Frost tolerance. Supplementary S6: Disease resistance. Table S5. Examples of genomic regions, candidate and cloned genes mapped for disease resistance in wheat species. Supplementary S7 insect and mite resistance. Table S6. Examples of genomic regions and candidate genes mapped for insect and mite resistance. Supplementary S8: Quality traits. Table S7. Examples of genomic regions, candidate and cloned genes for quality traits.Recent technological advances in next-generation sequencing (NGS) technologies have dramatically reduced the cost of DNA sequencing, allowing species with large and complex genomes to be sequenced. Although bread wheat (Triticum aestivum L.) is one of the world’s most important food crops, efficient exploitation of molecular marker-assisted breeding approaches has lagged behind that achieved in other crop species, due to its large polyploid genome. However, an international public–private effort spanning 9 years reported over 65% draft genome of bread wheat in 2014, and finally, after more than a decade culminated in the release of a gold-standard, fully annotated reference wheat-genome assembly in 2018. Shortly thereafter, in 2020, the genome of assemblies of additional 15 global wheat accessions was released. As a result, wheat has now entered into the pan-genomic era, where basic resources can be efficiently exploited. Wheat genotyping with a few hundred markers has been replaced by genotyping arrays, capable of characterizing hundreds of wheat lines, using thousands of markers, providing fast, relatively inexpensive, and reliable data for exploitation in wheat breeding. These advances have opened up new opportunities for marker-assisted selection (MAS) and genomic selection (GS) in wheat. Herein, we review the advances and perspectives in wheat genetics and genomics, with a focus on key traits, including grain yield, yield-related traits, end-use quality, and resistance to biotic and abiotic stresses. We also focus on reported candidate genes cloned and linked to traits of interest. Furthermore, we report on the improvement in the aforementioned quantitative traits, through the use of (i) clustered regularly interspaced short-palindromic repeats/CRISPR-associated protein 9 (CRISPR/Cas9)-mediated gene-editing and (ii) positional cloning methods, and of genomic selection. Finally, we examine the utilization of genomics for the next-generation wheat breeding, providing a practical example of using in silico bioinformatics tools that are based on the wheat reference-genome sequence.Peer reviewe

Effect of Calcined Colemanite Addition on the Rheological Behaviour of Porcelain Suspension

A standard composition for hard porcelain production was prepared by mixing 50 wt% kaolin, 25 wt% potassium feldspar and 25 wt% quartz. Calcined colemanite powders were added to the porcelain formulation by replacing the potassium feldspar up to 5 wt% to explore its effect on the rheological behaviour of porcelain slip casting. A rheological study has been carried out in order to optimize the processing of the slip casting by using a rotational stress-controlled rheometer. The measurements were performed at constant temperature (25°C) using a parallel plate configuration. Sweep measurements were then conducted in the shear rates ranging from about 0.1-1000 s¯¹. The stability of the suspensions with ammonium polyacrylate (Darvan 821A) was determined in order to select the suitable dispersant amount. In order to achieve casting of acceptable characteristics on a plaster of Paris mould, the slurry should have the appropriate thixotropic or shear-thinning behaviours. Therefore, the same favourable thixotropic behaviour of slurries of different amount of calcined colemanite powders, the solid contents of the slurries have been optimised

Effectiveness of defibrotide in the prevention of hepatic venooclusive disease among adult patients receiving allogeneic hematopoietic cell transplantation: A retrospective single center experience

Hepatic veno-occlusive disease/sinusoidal obstruction syndrome (VOD/SOS) is one of the most life-threatening early complications following hematopoietic cell transplantation (HCT). Due to the high mortality rate of severe VOD/SOS accompanied with multiorgan failure, there is a great interest in preventive strategies. The efficacy of defibrotide (DF) on the prevention of VOD/SOS has been clearly shown in high-risk pediatric patients, but evidence-based data on adults is scarce. In this report, we aimed to assess the impact of DF on the incidence of VOD/SOS in our center by posttransplant day 30 among patients who were treated with allogeneic HCT (allo?HCT). The study included a total of 56 patiens (28 males, 28 females). The median age of the study cohort was 43 (20?68). The daily dose of DF was 10 mg/kg and 25 mg/kg in 53 (94.6 %) and 3 (5.3 %) patients, respectively. Patients also recieved oral ursodeoxycolic acid (UDCA) 250 mg three-times daily started with conditioning until D + 90. Twenty-three (41.1 %) patients had at least one major EBMT-defined risk factor for development of VOD/SOS. One patient who belonged to a very high-risk group (with at least two major risk factors) developed very-severe VOD/SOS at posttransplant D + 20 and died as a result of multiorgan failure. The cumulative incidence of VOD/SOS at D + 30 was 1.9 %. Our findings indicate that 10 mg/kg daily intravenous DF combined with UDCA is quite effective in prevention of VOD/SOS in patients who underwent first allo-HSCT. © 202