Flower visitor fauna of the narrow endemic lily Lilium rubellum Baker in a lowland habitat in Yamagata, northern Japan

Floral visitor fauna of the narrow endemic lily Lilium rubellum was examined in a lowland habitat in Kaminoyama City, Yamagata Prefecture, northern Japan. Flowers of L. rubellum bloomed from early to late June. During 23 h of observing floral visitors, 64 insects were detected on L. rubellum flowers. Although coleopteran insects were most frequently found on L. rubellum flowers, they did not seem to be effective pollinators because of their body size. Bees were less frequently observed than coleopteran insects, but all individuals contacted sexual organs in L. rubellum flowers. Syrphid flies were seen less frequently, but they were also considered effective pollinators. From our observations, L. rubellum is a bee-pollinated species of the genus Lilium. Bee pollination has also been recorded in a species of Lilium sect. Archelirion, L. japonicum var. abeanum. The floral characteristics of L. japonicum var. abeanum (e.g., pinkish color, relatively small and tubular corolla, and lateral insertion of anthers into the corolla) were similar to those of L. rubellum and the character combination may be related to the bee-pollination mode in Lilium. key words： bee pollination, Bombus, Ceratina, flower visitor fauna, Lilium japonicum var. abeanum, Lilium rubellum, nitidulid beetle, syrphid fl

気管・気管支内腔に多発ポリープ様病変を呈した小細胞癌の１例

It is rare that small cell carcinoma has multiple polypoid lesions. There is few report of small cell carcinoma in trachea and bronchus. We experienced a case of multiple polypoid lesions of small cell carcinoma. In January ２０１X, Woman in ６０s had operation for esophageal squamous cell carcinoma. In July ２０１X, thoracic and abdominal CT for postoperative follow-up revealed many nodules in the trachea, the bronchus, the lungs, and the liver, and mediastinum lymphadenopathy. We examined bronchoscopy and there were multiple polypoid lesions in the trachea and bronchus. Left main bronchus were almost occluded by maximum lesion, and we performed biopsy. We suspected recurrence of esophageal squamous cell carcinoma, therefore quickly started chemotherapy（CDDP＋５‐FU）and radiation for the left main bronchus. However, the pathological diagnosis was small cell carcinoma, we stopped the chemotherapy for esophageal squamous cell carcinoma. This case suggests we should examine to differentiate primary tumor or metastasis when we find a new lesion

Validity of the Short Nutritional Assessment Questionnaire for Japanese Patients with Cancer Undergoing Outpatient Chemotherapy

Purpose : To investigate the utility of the Short Nutritional Assessment Questionnaire (SNAQ) in the nutritional evaluation of patients with cancer undergoing outpatient chemotherapy. Methods :We included 229 patients with cancer who were undergoing outpatient chemotherapy between October 2015 and April 2016. The SNAQ and the revised SNAQ (addition of age and body mass index) were implemented, and their relationships with Controlling Nutritional Status (CONUT), an indicator of bionutritional assessment, were examined. Results : The cutoff value of the SNAQ score corresponding to moderate-to-severe undernourishment in CONUT values was 0.5, with a sensitivity of 87.5% and a specificity of 65.9%, and the corresponding values for the revised SNAQ score were 2.5, 91.7%, and 62.9%, respectively. This cutoff value and the corresponding positive prediction value for the revised SNAQ were superior to those of SNAQ. Binary logistic regression analysis with the revised SNAQ and sex as independent variables and the CONUT value as the dependent variable revealed that the higher the SNAQ score, the more likely it was that CONUT moderate-to-severe undernourishment would be identified (odds ratio, 1.48 ; , 1.34-1.96) . Conclusion : Nutritional evaluation with the revised SNAQ can predict moderateto- severe undernourishment according to CONUT in patients with cancer undergoing outpatient chemotherapy

〈Cases Reports〉Recurrent focal intestinal perforation in extremely-low-birth-weight infant

[Abstract] In recent years, the incidence of focal intestinal perforation (FIP) has been increasing, as the survival rate of extremely-low-birth-weight(ELBW) infants has been rising. We present a case of an ELBW infant who suffered three recurrences of FIP in a very short period of time. The patient was a female infant who was born at 24 weeks and 2 days of gestation, with a birth weight of 579 g. On her 22^nd day of life, abdominal X-rays revealed free air, which suggested intestinal perforation, and an intraperitoneal drainage tube was placed. Intraperitoneal lavage was performed on day 28 of life,and the drained fluid was turbid with feces, suggesting a recurrence of perforation. On day 30 of life, laparotomy revealed a perforation of approximately 1cm in diameter located at 6 cm from the ileocecum on the oral side. The X-ray taken on day 34 again revealed free air, and, through another laparotomy, a new perforation was found at about 15 cm from the stoma on the oral side. This case provides suggestions that may shed light on our approach to determine the pathogenesis of FIP, especially since no other case of FIP recurring three times has ever been reported

The whole blood transcriptional regulation landscape in 465 COVID-19 infected samples from Japan COVID-19 Task Force

「コロナ制圧タスクフォース」COVID-19患者由来の血液細胞における遺伝子発現の網羅的解析 --重症度に応じた遺伝子発現の変化には、ヒトゲノム配列の個人差が影響する--. 京都大学プレスリリース. 2022-08-23.Coronavirus disease 2019 (COVID-19) is a recently-emerged infectious disease that has caused millions of deaths, where comprehensive understanding of disease mechanisms is still unestablished. In particular, studies of gene expression dynamics and regulation landscape in COVID-19 infected individuals are limited. Here, we report on a thorough analysis of whole blood RNA-seq data from 465 genotyped samples from the Japan COVID-19 Task Force, including 359 severe and 106 non-severe COVID-19 cases. We discover 1169 putative causal expression quantitative trait loci (eQTLs) including 34 possible colocalizations with biobank fine-mapping results of hematopoietic traits in a Japanese population, 1549 putative causal splice QTLs (sQTLs; e.g. two independent sQTLs at TOR1AIP1), as well as biologically interpretable trans-eQTL examples (e.g., REST and STING1), all fine-mapped at single variant resolution. We perform differential gene expression analysis to elucidate 198 genes with increased expression in severe COVID-19 cases and enriched for innate immune-related functions. Finally, we evaluate the limited but non-zero effect of COVID-19 phenotype on eQTL discovery, and highlight the presence of COVID-19 severity-interaction eQTLs (ieQTLs; e.g., CLEC4C and MYBL2). Our study provides a comprehensive catalog of whole blood regulatory variants in Japanese, as well as a reference for transcriptional landscapes in response to COVID-19 infection

DOCK2 is involved in the host genetics and biology of severe COVID-19

「コロナ制圧タスクフォース」COVID-19疾患感受性遺伝子DOCK2の重症化機序を解明 --アジア最大のバイオレポジトリーでCOVID-19の治療標的を発見--. 京都大学プレスリリース. 2022-08-10.Identifying the host genetic factors underlying severe COVID-19 is an emerging challenge. Here we conducted a genome-wide association study (GWAS) involving 2, 393 cases of COVID-19 in a cohort of Japanese individuals collected during the initial waves of the pandemic, with 3, 289 unaffected controls. We identified a variant on chromosome 5 at 5q35 (rs60200309-A), close to the dedicator of cytokinesis 2 gene (DOCK2), which was associated with severe COVID-19 in patients less than 65 years of age. This risk allele was prevalent in East Asian individuals but rare in Europeans, highlighting the value of genome-wide association studies in non-European populations. RNA-sequencing analysis of 473 bulk peripheral blood samples identified decreased expression of DOCK2 associated with the risk allele in these younger patients. DOCK2 expression was suppressed in patients with severe cases of COVID-19. Single-cell RNA-sequencing analysis (n = 61 individuals) identified cell-type-specific downregulation of DOCK2 and a COVID-19-specific decreasing effect of the risk allele on DOCK2 expression in non-classical monocytes. Immunohistochemistry of lung specimens from patients with severe COVID-19 pneumonia showed suppressed DOCK2 expression. Moreover, inhibition of DOCK2 function with CPYPP increased the severity of pneumonia in a Syrian hamster model of SARS-CoV-2 infection, characterized by weight loss, lung oedema, enhanced viral loads, impaired macrophage recruitment and dysregulated type I interferon responses. We conclude that DOCK2 has an important role in the host immune response to SARS-CoV-2 infection and the development of severe COVID-19, and could be further explored as a potential biomarker and/or therapeutic target

Changes in carbon stock following soil scarification of non-wooded stands in Hokkaido, northern Japan

To restore nonwooded stands dominated by dwarf bamboo species (Sasa kurilensis or S. senanensis) into forests, mechanical soil scarification has been applied in northern Japan since the 1960s. The treatment is followed both by natural regeneration and artificial planting. In this study, we quantified the total carbon stock (plants plus 0.3 m depth of soil) of these stands over 35-year age-sequences. The natural regeneration stands were gradually dominated by Betula ermanii. The carbon stock increased linearly to 215.1 ± 35.2 Mg C ha^[-1] for a 37-year-old stand formerly dominated by S. kurilensis, and 181.1 ± 29.8 Mg C ha^[-1] for 34-year-old stand formerly dominated by S. senanensis. The latter was similar to that of a Picea glehnii plantation, formerly dominated by S. senanensis, with comparable stand age (160.3 ± 6.7 Mg C ha^[-1] for 35-year-old stands). Although the carbon stock in plants quickly offset the untreated level, that in the soil remained depressed even in the older stands. This resulted in small differences in carbon stock of these stands with untreated dwarf bamboo stands. We conclude that natural regeneration following scarification could be a prime option for carbon sink management in the region. However, we should take a long rotation period (i.e. > 50-year) to ensure a carbon sink state. A potential of further improvements of the practice, including that reduce intensity of soil disturbance, was presented