Chromosome analysis on Central and Southern Italy population of the common toad, Bufo bufo (Amphibia, Anura)

Amphibians constitute a very good model to explore the historical aspects of species distributions due to their low dispersal capacity and low individual vagility. Bufonidae are one of the most speciose family of Anura, including taxa, such as Bufo bufo, widespread in Eurasian regions. We performed a karyological study with standard and sequential C-banding + fluorochromes (Chromomycin A3 (CMA) and Diamidinophenylindole (DAPI) on several tadpoles from different populations of Central and Southern Italy. All the examined tadpoles exhibited the standard Bufokaryotype of 2n = 22 biarmed chromosomes, with the first six pairs larger than the other five (7 - 11) pairs and NOR associated heterochromatin distal on the long arms of the 6thchromosome pair, that was also the only chromosome CMA-positive region. C-banding evidenced centromeric heterochromatin, DAPI positive, on all the chromosomes in all the studied populations from Central Italy. The Southern Italy populations differed in additional paracentromeric C-bands on the short arms of chromosomes 1, 3 and 5. These results support the partition of Central populations of B. bufo from the Southern ones, as evidenced also from molecular phylogenetic studie

Characterization of Two Transposable Elements and an Ultra-Conserved Element Isolated in the Genome of Zootoca vivipara (Squamata, Lacertidae)

: Transposable elements (TEs) constitute a considerable fraction of eukaryote genomes representing a major source of genetic variability. We describe two DNA sequences isolated in the lizard Zootoca vivipara, here named Zv516 and Zv817. Both sequences are single-copy nuclear sequences, including a truncation of two transposable elements (TEs), SINE Squam1 in Zv516 and a Tc1/Mariner-like DNA transposon in Zv817. FISH analyses with Zv516 showed the occurrence of interspersed signals of the SINE Squam1 sequence on all chromosomes of Z. vivipara and quantitative dot blot indicated that this TE is present with about 4700 copies in the Z. vivipara genome. FISH and dot blot with Zv817 did not produce clear hybridization signals. Bioinformatic analysis showed the presence of active SINE Squam 1 copies in the genome of different lacertids, in different mRNAs, and intronic and coding regions of various genes. The Tc1/Mariner-like DNA transposon occurs in all reptiles, excluding Sphenodon and Archosauria. Zv817 includes a trait of 284 bp, representing an amniote ultra-conserved element (UCE). Using amniote UCE homologous sequences from available whole genome sequences of major amniote taxonomic groups, we performed a phylogenetic analysis which retrieved Prototheria as the sister group of Metatheria and Eutheria. Within diapsids, Testudines are the sister group to Aves + Crocodylia (Archosauria), and Sphenodon is the sister group to Squamata. Furthermore, large trait regions flanking the UCE are conserved at family level

Haplotype characterization of a stranded common minke whale calf (Balaenoptera acutorostrata lacépède, 1804): Is the mediterranean sea a potential calving or nursery ground for the species?

The stranding of a suckling calf of Common Minke Whale (Balaenoptera acutorostrata) on the coast near Salerno (Campania, Southern Italy) is reported. The molecular analysis of a partial sequence of the mitochondrial DNA control region shows that the animal bore a haplotype identical to haplotype Ba169 considered as typical of individuals from North Atlantic population. Historical data and our results suggest the possibility that the Mediterranean Sea might be a potential calving or nursery ground for this species

Helix straminea Briganti, 1825 in Italy (Gastropoda: Pulmonata): taxonomic history, morphology, biology, distribution and phylogeny

The land snail taxon Helix straminea Briganti, 1825 has been reintroduced as a valid species in 2014. We provide here a comprehensive account of its taxonomy, distribution, anatomy, phylogeny and karyology in Italy. An overview of the historical views on the validity of the species is presented and faunistic data are reviewed and implemented with new records from Campania and Basilicata. A lectotype is fixed for H. straminea from the syntypes stored in the Muséum d'Histoire Naturelle of Genève, as well as for three other taxa (Helix straminiformis Bourguignat, 1876, Helix yleobia Bourguignat, 1883 and Helix straminea ssp. elongata Bourguignat, 1860). Genital system, radula and karyotype are described for the first time. Molecular analysis of two mitochondrial genes combining GenBank data and the new sequences presented in this paper showed no differentiation between the northern and southern Italian populations. The conservation status of the species and its possible threats are discussed

Age estimation and growth of striped dolphins Stenella coeruleoalba stranded along the coasts of south-western Italy

The knowledge of demographic traits such as longevity, growth rates and age at sexual maturity is crucial for understanding the structure of a population in its natural environment and implementing appropriate strategies for its management and conservation. Based on counts of growth layer groups in sections of decalcified teeth using the paraffin technique, we estimated the age and growth of 25 individuals of striped dolphin (Stenella coeruleoalba) found dead stranded along the coast of Campania and Calabria (south Italy, central-western Mediterranean) from 2013 to 2018. Seven individuals, with TL of 100–110 cm, were calves under 1 year old. The oldest male and female individuals were 19 and 14 years old, respectively. Growth curve estimated using the Gompertz growth model (GGM) showed that in S. coeruleoalba male growth trajectories are partly in accordance with those reported in other studies on the same species from different Mediterranean areas. The high frequency (28%) of calves strongly suggests that females of this species use the marine area all around the south-western Italian coasts to give birth to their offspring. Furthermore, a comparison with the estimated age of striped dolphins from other Mediterranean marine areas shows that the longevity of the individuals examined in this study is much lower. Our study provides information toward understanding the demographic traits of S. coeruleoalba from Mediterranean Sea. The results reported here can be useful for future research aimed at understanding population structure, mortality patterns and the effects of anthropogenic activity on the survival of this species in this marine area

Chromosomes of Lepidochitona caprearum (Scacchi, 1836) (Polyplacophora, Acanthochitonina, Tonicellidae) provide insights into Acanthochitonina Karyological evolution

We describe the karyotype, location of nucleolus-organizing regions (NORs) and heterochromatin composition and distribution in Lepidochitona caprearum (Scacchi, 1836). The examined specimens had 2n=24 chromosomes; the elements of pairs 1–4 were metacentric, subtelocentric those of the fifth pair, telocentric the elements of other pairs. NOR-FISH, Ag-NOR- and CMA3 banding showed NORs localized on pericentromeric regions of a medium small sized, telocentric chromosome pair. After C-banding or digestions with restriction enzyme NOR associate heterochromatin only was cytologically evident, resulting CMA3 positive. The comparison with chromosome data of other chitons, other than to evidence a karyotypic similarity of L. caprearum to species of suborder Acanthochitonina, allows us to infer that chromosome evolution in the suborder mainly occurred via reduction of the number of the chromosomes by centric fusions, which took place repeatedly and independently in the different lineages of Acanthochitonina

Le patelle delle coste campane: aspetti sistematici, cromosomici e valutazione delle stress genomico

Dottorato di Ricerca in Biologia Animale,XX Ciclo, a.a.2006-2007By applying advanced techniques that are available now days, it is relatively feasible to determine and monitor the degree of pollution of marine systems. However, it is still difficult to evaluate the effects that pollution may have on marine organisms and, in general, on the environment. A way to overcome this limit is by biomonitoring, i.e. by monitoring the biological responses of selected organisms (namely biomarkers) to pollutants. Many species of molluscs have been labelled as efficient biomarkers. In my research project the aim was to verify the appropriateness of limpets (Patella caerulea) as biomarkers by analyzing specimens of Patella collected in sites with different degrees of pollution along the coasts of the Campania region (Italy). To reach my goal, I measured the potential damage of pollutants at two levels: somatic (by monitoring gill histopathologies) and germinal (by monitoring gonad chromosomic aberrations). My results suggest that pollutants caused a significant damage in natural populations of P. caerulea. The gills of specimens collected from polluted sites presented structural changes, cell and tissue degeneration (cells with vacuoles, dissociation of haemocele septa, nuclear alterations), or the development of compensative mechanisms related to environmental toxicity (epithelium swelling, hyperplasia and fusion of septa). Furthermore, although preliminary, the results suggest that the level of gill injury appeared to be related to the degree of pollution of the study site. Finally, gill aberrations were always higher in each study site compared to the reference site. 2 The gonads of individuals of polluted sites also showed comparatively higher rates of chromosome aberrations, which are supposed to be a by product of an exposition to heavy metal and organic pollutants. In conclusion, the results obtained in my research project suggest that pollutants may act on the cells both of the somatic and germinal lineage in Patella and are thus potentially dangerous for the whole natural population of limpets of the Campania regionUniversità della Calabri

From Fish Eggs to Fish Name: Caviar Species Discrimination by COIBar-RFLP, an Efficient Molecular Approach to Detect Fraud in the Caviar Trade

The demand for caviar is growing as is its price on the market. Due to the decline of true caviar production from sturgeons, eggs from other fish species and other animals have been used as substitutes for caviar. The labels on these products should indicate the species from which the eggs were derived, but the label can be misleading in some cases. In this context, species identification using DNA analysis is crucial for traceability and authentication of caviar products. In this work, we applied the COIBar-RFLP procedure to obtain species-specific endonuclease restriction patterns useful to discriminate “caviar” species. The tested caviar products were identified as originating from eight species: Acipenser transmontanus, A. gueldenstaedtii, A. stellatus, A. baerii, Mallotus villosus, Huso huso, Cyclopterus lumpus and Eumicrotremus orbis. The results demonstrated that 14% of the caviar products examined have a label that does not indicate the species from which the eggs were originated. The MboI restriction enzyme produced specific profiles discriminating the eight species, confirming that the COIBar-RFLP is a useful approach for routine screening of seafood products due to its ease and rapid execution, as the results of screening can be obtained within 7 h, by-passing the need for sequencing

Guida naturalistica di campo ai Cetacei delle acque costiere del Parco Nazionale del Cilento, Vallo di Diano e Alburni

In the Mediterranean basin 23 species of cetaceans are known: 11 are regular and live, breed and feed and 12 are irregular, rare or accidental. These species are common in all the oceans of the globe (cosmopolitan species) and therefore none of them is endemic. In the inshore coastal waters of the Cilento, Vallo di Diano and Alburni National Park, five of the 23 Mediterranean species are regularly sighted; they are: one species of Mysticeti, the fin whale Balaenoptera physalus (Linnaeus, 1758) (family Balaenopteridae) and four species of Odontoceti, including the sperm whale Physeter microcephalus Linnaeus, 1758 (= P. catodon) (Family Physeteridae), the striped dolphin Stenella coeruleoalba (Meyen, 1833), the Common bottlenose dolphin Tursiops truncatus (Montagu, 1821) and the Risso’s dolphin Grampus griseus (G. Cuvier, 1812), (the last three species belonging to the family Delphinidae). A sixth species has recently been registered for the Park boundaries, the Dwarf Sperm Whale, Kogia sima (Owen, 1866), based on finding of a dead-stranded individual within the study area. Regarding the cetofauna of the coastal waters of the Gulf of Salerno, there are other two records and they are: the long-finned pilot whale Globicephala melas (Traill, 1809) and the Common Minke whale Balaenoptera acutorostrata Lacépède, 1804 (Mysticeti: Balaenopteridae). The former species is documented exclusively by bibliographical and museal data. The latter species is considered as “irregular” in Mediterranean Sea since there is no certainty that it reproduces, but it is possible that it attends this marine area for some periods of the year. This guide begins with the evolutionary history of Cetaceans. The following chapters are devoted to the general characteristics and biology of these animals, to the area of study and research methodology. It was considered interesting to include also a chapter with a brief historical overview on Cetacean researches in Campania. Then, a presentation is given for each of the species found in the Park boundaries and neighbouring, including notes on taxonomy, general description and diagnosis, notes on biology and ecology, general and local distribution, status and conservation, and some curiosities in the relationship with the man. In total the occurrence of eight species was herein documented in the survey area representing approximately the 73% of the estimated fauna of Campania Region (11 species) and about the 47% of the estimated Italian cetofauna (17 species: eight regular, four “irregular” and five occasional). The guide concludes with two chapters on recent laboratory researches on specimens from Cetofauna inhabiting coastal waters of the Cilento, Vallo di Diano and Alburni National Park. The first research concerns the preliminary results of a study on age determination of individuals stranded along the Cilento coast by counting the incremental growth lines observed in the tooth sections. The other research concerns molecular analysis to determine the origins of the stranded individuals. Cetaceans are protected at international level by CITES (Appendices I and II), by the Habitats Directive (Council Directive 92/43/EEC of 21 May 1992) on the conservation of natural habitats and of wild fauna and flora (annex II and IV), and a lot of species are mentioned on the IUCN Red List of Threatened Species. At European level some species are protected by the “Barcelona Convention” on the Protection of the Marine Environment and the Mediterranean Coast (and its new Application Protocol relative to Special Protection Zones and the Biological Diversity in the Mediterranean adopted on 1995), the “Bonn Convention” on the Conservation of Migratory Species of Wild Animals, the “Bern Convention” relative to the Conservation of European Wildlife and Natural Habitats, and by the Agreement on the Conservation of Cetaceans in the Black Sea Mediterranean Sea and Contiguous Atlantic Area (ACCOBAMS). For these reasons the Cetaceans are protected by special laws in many countries