Assessing impact of thermal units on growth and development of mustard varieties grown under optimum sown conditions

Thermal unit indices have a strong correlation with the phenology, growth and yield of crops and can be effectively used to select suitable crop cultivars for specific environmental conditions especially temperature. In this study, four mustard varieties (viz., ‘BARI Sharisha-14', ‘BARI Sharisha-15', ‘BARI Sharisha-16' and ‘Tori-7') were grown in two consecutive growing to assess the impact of thermal unit indices on crop growth and development, and to select the suitable variety for better yield under optimum sowing condition. Thermal unit indices viz., growing degree-day (GDD), helio-thermal units (HTU), phenothermal index (PTI) and heat use efficiency (HUE) were estimated from daily temperature and sunshine hours. Role of GDD on different growth indicators and seed yield (SY) were estimated through association and dependence of the traits. Significant variations in studied genotypes were observed for different traits. Among the studied varieties, ‘BARI Sharisha-16' produced higher dry matter and seed yields (1.82 t ha-1) while accumulated maximum GDD at different growth stages. A strong positive association was obtained between GDD and the studied traits. Thermal unit indices had a strong influence in attaining different phenophases and other growth indicators. Therefore, results suggest that those indices could be used for growth prediction; further ‘BARI Sharisha-16' is expected to use heat energy more efficiently for increasing the seed yields which indicated that the crop can perform better under global warming scenarios. © 2019, Association of Agrometeorologists. All rights reserved

Comparative performance of two bread wheat (Triticum Aestivum L.) genotypes under salinity stress

The study was conducted at a greenhouse of the Graduate School of Biosphere Science in Hiroshima University, Japan under the ambient conditions to find out the effect of salinity stress on some physiological and biochemical characteristics of two bread wheat genotypes and also to elucidate the salt tolerance mechanism of these wheat genotypes. Two wheat genotypes namely ‘Sakha 95' and ‘Misr 2' were exposed to 50, 100 and 150 mM NaCl levels of salinity. Results showed that both genotypes were varied significantly for all traits under all levels of salt stress. Among the genotypes, growth of the genotype ‘Misr 2' was found much better than the ‘Sakha 95', with the maintaining a higher dry biomass. The genotype ‘Misr 2' also maintained a high concentrations of soluble-sugars, proline, and various antioxidant enzymes activity such as glutathione reductase (GR), peroxidase (POD) and catalase (CAT) compared with genotype ‘Sakha 95'; whereas, maintained a lower levels of lipid peroxidation represented by the malondialdehyde (MDA) concentration. Indicating that genotype ‘Misr 2' has ability to survive under salinity stress than the genotype ‘Sakha 95'. Similarly, salinity stress also significantly changed in Ca++ contents and Na+/Ca++ ratio in both wheat genotypes. The relative reduction in Ca++ concentration and Na+/Ca++ ratio was found higher in the genotype ‘Sakha 95' than in ‘Misr 2' and lead to showing the signs injury. Thus, the genotype ‘Misr 2' would be useful to develop a salinity tolerant wheat varieties in the future breeding program. © 2019, ALÖKI Kft., Budapest, Hungary

Yield of wheat is increased through improving the chemical properties, nutrient availability and water productivity of salt affected soils in the north delta of Egypt

The lysimeter experiment was carried out twice in consecutive two years (2014-15 and 2015-16) at Sakha Agricultural Research Station, Kafrelsheikh, Egypt to study the effect of three irrigation levels water (i.e., 100, 110 and 120% field capacity (FC), two rates of gypsum (G) (i.e., 50 and 100% G) and three sources of nitrogen (90 kg nitrogen (N), 10 t compost (C) and 7.5 t C + 45 kg N (CN) fed-1 (fed = 4200 m2)) on grain yield of wheat, water relations and soil chemical properties. Water consumptive use (WCU) was markedly increased due to the increase of the level of irrigation, rate of gypsum (G) and CN source (7.5 t C + 45 kg N fed-1). Irrigation with water amount equal to 120% FC recorded the highest values of WCU 1433 and 1570 m3fed-1 in both seasons. Water productivity (kg grain m-3 water) for either water application (WA) in both seasons or WCU in the second season was decreased by increasing level of irrigation from 100 to 120% FC in the second season, while the inverse was true for WCU in the first season. The highest mean values of water productivity for WCU 1.816 and 1.791 kg m-3 were obtained with the irrigation level of 120% FC in the first season and 100% FC in the second season, respectively. Gypsum rate and N source have an effect on the productivity of irrigation water (WP) for WA and WCU, where the highest mean values for both the two irrigations efficiency were recorded under 100% G requirements and CN (7.5 t C + 45 kg N fed-1). The interaction of 110% FC × 100% G × 7.5 t C + 45 kg N fed-1 produced the highest values of WP for WA (1.245 and 1.374 kg grain m-3 WA) in both seasons. Grain yield fedd.-1 was increased significantly with the irrigation level from 100 to 120% FC in both seasons, G rate and CN source. Grain yield (GY) did not differ significantly due to the levels of irrigation water between 120 and 110% FC in both years. Application of 100% G and 7.5 t C + 45 kg N fed-1 at any irrigation level were among those treatments having high GY, being insignificant. The mean values of electrical conductivity (acidity; ECe) and soil sodicity (SARe) were affected by irrigation treatments, G rates and nitrogen sources. A stronger reduction in soil ECe and SARe were recorded under the irrigation level of 120%FC, 100% G and 10 t compost in both seasons. While the soils ECe and SARe were increased by application of chemical N fertilizer alone or with compost. Therefore, it can be concluded that irrigation with water amount equal to 110 or 120% FC, 100% G requirements and 7.5 t C and 45 kg N fed-1 was the best treatment for getting high GY, improving the soil chemical properties, nutrients availability and increasing the water productivity of salt-affected soil in North Delta of Egypt. © 2019, ALÖKI Kft., Budapest, Hungary

Data from: Plastome sequencing of ten nonmodel crop species uncovers a large insertion of mitochondrial DNA in cashew

In plant evolution, intracellular gene transfer (IGT) is a prevalent, ongoing process. While nuclear and mitochondrial genomes are known to integrate foreign DNA via IGT and horizontal gene transfer (HGT), plastid genomes (plastomes) have resisted foreign DNA incorporation and only recently has IGT been uncovered in the plastomes of a few land plants. In this study, we completed plastome sequences for l0 crop species and describe a number of structural features including variation in gene and intron content, inversions, and expansion and contraction of the inverted repeat (IR). We identified a putative rpl22 in cinnamon (Cinnamomum verum J. Presl) and other sequenced Lauraceae and an apparent functional transfer of rpl23 to the nucleus of quinoa (Chenopodium quinoa Willd.). In the orchard tree cashew (Anacardium occidentale L.), we report the insertion of an ∼6.7-kb fragment of mitochondrial DNA into the plastome IR. BLASTn analyses returned high identity hits to mitogenome sequences including an intact ccmB open reading frame. Using three plastome markers for five species of Anacardium, we generated a phylogeny to investigate the distribution and timing of the insertion. Four species share the insertion, suggesting that this event occurred <20 million yr ago in a single clade in the genus. Our study extends the observation of mitochondrial to plastome IGT to include long-lived tree species. While previous studies have suggested possible mechanisms facilitating IGT to the plastome, more examples of this phenomenon, along with more complete mitogenome sequences, will be required before a common, or variable, mechanism can be elucidated

Assessing impact of thermal units on growth and development of mustard varieties grown under optimum sown conditions

Thermal unit indices have a strong correlation with the phenology, growth and yield of crops and can be effectively used to select suitable crop cultivars for specific environmental conditions especially temperature. In this study, four mustard varieties (viz., 'BARI Sharisha-14', 'BARI Sharisha-15', 'BARI Sharisha-16' and 'Tori-7') were grown in two consecutive growing to assess the impact of thermal unit indices on crop growth and development, and to select the suitable variety for better yield under optimum sowing condition. Thermal unit indices viz., growing degree-day (GDD), helio-thermal units (HTU), phenothermal index (PTI) and heat use efficiency (HUE) were estimated from daily temperature and sunshine hours. Role of GDD on different growth indicators and seed yield (SY) were estimated through association and dependence of the traits. Significant variations in studied genotypes were observed for different traits. Among the studied varieties, 'BARI Sharisha-16' produced higher dry matter and seed yields (1.82 t ha-1) while accumulated maximum GDD at different growth stages. A strong positive association was obtained between GDD and the studied traits. Thermal unit indices had a strong influence in attaining different phenophases and other growth indicators. Therefore, results suggest that those indices could be used for growth prediction; further 'BARI Sharisha-16' is expected to use heat energy more efficiently for increasing the seed yields which indicated that the crop can perform better under global warming scenarios

AOE_Mt-K101-22contigs

Mitochondrial contigs of Anacardium occidentale (Cashew) assembled by Velvet assembler with a 101 kmer size

Plastome Sequencing of Ten Nonmodel Crop Species Uncovers a Large Insertion of Mitochondrial DNA in Cashew

In plant evolution, intracellular gene transfer (IGT) is a prevalent, ongoing process. While nuclear and mitochondrial genomes are known to integrate foreign DNA via IGT and horizontal gene transfer (HGT), plastid genomes (plastomes) have resisted foreign DNA incorporation and only recently has IGT been uncovered in the plastomes of a few land plants. In this study, we completed plastome sequences for l0 crop species and describe a number of structural features including variation in gene and intron content, inversions, and expansion and contraction of the inverted repeat (IR). We identified a putative in cinnamon ( J. Presl) and other sequenced Lauraceae and an apparent functional transfer of to the nucleus of quinoa ( Willd.). In the orchard tree cashew ( L.), we report the insertion of an ∼6.7-kb fragment of mitochondrial DNA into the plastome IR. BLASTn analyses returned high identity hits to mitogenome sequences including an intact open reading frame. Using three plastome markers for five species of , we generated a phylogeny to investigate the distribution and timing of the insertion. Four species share the insertion, suggesting that this event occurred <20 million yr ago in a single clade in the genus. Our study extends the observation of mitochondrial to plastome IGT to include long-lived tree species. While previous studies have suggested possible mechanisms facilitating IGT to the plastome, more examples of this phenomenon, along with more complete mitogenome sequences, will be required before a common, or variable, mechanism can be elucidated