An Intuitive Approach to Geometric Continuity for Parametric Curves and Surfaces (Extended Abstract)

The notion of geometric continuity is extended to an arbitrary order for curves and surfaces, and an intuitive development of constraints equations is presented that are necessary for it. The constraints result from a direct application of the univariate chain rule for curves, and the bivariate chain rule for surfaces. The constraints provide for the introduction of quantities known as shape parameters. The approach taken is important for several reasons: First, it generalizes geometric continuity to arbitrary order for both curves and surfaces. Second, it shows the fundamental connection between geometric continuity of curves and geometric continuity of surfaces. Third, due to the chain rule derivation, constraints of any order can be determined more easily than derivations based exclusively on geometric measures

Bulk and Interfacial Shear Thinning of Immiscible Polymers

Nonequilibrium molecular dynamics simulations are used to study the shear thinning behavior of immiscible symmetric polymer blends. The phase separated polymers are subjected to a simple shear flow imposed by moving a wall parallel to the fluid-fluid interface. The viscosity begins to shear thin at much lower rates in the bulk than at the interface. The entire shear rate dependence of the interfacial viscosity is consistent with a shorter effective chain length $s^*$ that also describes the width of the interface. This $s^*$ is independent of chain length $N$ and is a function only of the degree of immiscibility of the two polymers. Changes in polymer conformation are studied as a function of position and shear rate.Shear thinning correlates more closely with a decrease in the component of the radius of gyration along the velocity gradient than with elongation along the flow. At the interface, this contraction of chains is independent of $N$ and consistent with the bulk behavior for chains of length $s^*$. The distribution of conformational changes along chains is also studied. Central regions begin to stretch at a shear rate that decreases with increasing $N$, while shear induced changes at the ends of chains are independent of $N$.Comment: 8 pages, 8 figure

Income, personality, and subjective financial well-being: the role of gender in their genetic and environmental relationships

Citation: Zyphur, M. J., Li, W. D., Zhang, Z., Arvey, R. D., & Barsky, A. P. (2015). Income, personality, and subjective financial well-being: the role of gender in their genetic and environmental relationships. Frontiers in Psychology, 6, 16. doi:10.3389/fpsyg.2015.01493Increasing levels of financial inequality prompt questions about the relationship between income and well-being. Using a twins sample from the Survey of Midlife Development in the U. S. and controlling for personality as core self-evaluations (CSE), we found that men, but not women, had higher subjective financial well-being (SFWB) when they had higher incomes. This relationship was due to 'unshared environmental' factors rather than genes, suggesting that the effect of income on SFWB is driven by unique experiences among men. Further, for women and men, we found that CSE influenced income and SFWB, and that both genetic and environmental factors explained this relationship. Given the relatively small and male-specific relationship between income and SFWB, and the determination of both income and SFWB by personality, we propose that policy makers focus on malleable factors beyond merely income in order to increase SFWB, including financial education and building self-regulatory capacity

AS2TS system for protein structure modeling and analysis

We present a set of programs and a website designed to facilitate protein structure comparison and protein structure modeling efforts. Our protein structure analysis and comparison services use the LGA (local-global alignment) program to search for regions of local similarity and to evaluate the level of structural similarity between compared protein structures. To facilitate the homology-based protein structure modeling process, our AL2TS service translates given sequence–structure alignment data into the standard Protein Data Bank (PDB) atom records (coordinates). For a given sequence of amino acids, the AS2TS (amino acid sequence to tertiary structure) system calculates (e.g. using PSI-BLAST PDB analysis) a list of the closest proteins from the PDB, and then a set of draft 3D models is automatically created. Web services are available at

Driving under the influence of alcohol: a sequence analysis approach

Driving under the influence of alcohol: A sequence analysis approac

Random solids and random solidification: What can be learned by exploring systems obeying permanent random constraints?

In many interesting physical settings, such as the vulcanization of rubber, the introduction of permanent random constraints between the constituents of a homogeneous fluid can cause a phase transition to a random solid state. In this random solid state, particles are permanently but randomly localized in space, and a rigidity to shear deformations emerges. Owing to the permanence of the random constraints, this phase transition is an equilibrium transition, which confers on it a simplicity (at least relative to the conventional glass transition) in the sense that it is amenable to established techniques of equilibrium statistical mechanics. In this Paper I shall review recent developments in the theory of random solidification for systems obeying permanent random constraints, with the aim of bringing to the fore the similarities and differences between such systems and those exhibiting the conventional glass transition. I shall also report new results, obtained in collaboration with Weiqun Peng, on equilibrium correlations and susceptibilities that signal the approach of the random solidification transition, discussing the physical interpretation and values of these quantities both at the Gaussian level of approximation and, via a renormalization-group approach, beyond.Comment: Paper presented at the "Unifying Concepts in Glass Physics" workshop, International Centre for Theoretical Physics, Trieste, Italy (September 15-18, 1999

Connecting the vulcanization transition to percolation

The vulcanization transition is addressed via a minimal replica-field-theoretic model. The appropriate long-wave-length behavior of the two- and three-point vertex functions is considered diagrammatically, to all orders in perturbation theory, and identified with the corresponding quantities in the Houghton-Reeve-Wallace field-theoretic approach to the percolation critical phenomenon. Hence, it is shown that percolation theory correctly captures the critical phenomenology of the vulcanization transition associated with the liquid and critical states.Comment: 9 pages, 5 figure

Random graph asymptotics on high-dimensional tori. II. Volume, diameter and mixing time

For critical bond-percolation on high-dimensional torus, this paper proves sharp lower bounds on the size of the largest cluster, removing a logarithmic correction in the lower bound in Heydenreich and van der Hofstad (2007). This improvement finally settles a conjecture by Aizenman (1997) about the role of boundary conditions in critical high-dimensional percolation, and it is a key step in deriving further properties of critical percolation on the torus. Indeed, a criterion of Nachmias and Peres (2008) implies appropriate bounds on diameter and mixing time of the largest clusters. We further prove that the volume bounds apply also to any finite number of the largest clusters. The main conclusion of the paper is that the behavior of critical percolation on the high-dimensional torus is the same as for critical Erdos-Renyi random graphs. In this updated version we incorporate an erratum to be published in a forthcoming issue of Probab. Theory Relat. Fields. This results in a modification of Theorem 1.2 as well as Proposition 3.1.Comment: 16 pages. v4 incorporates an erratum to be published in a forthcoming issue of Probab. Theory Relat. Field

The scaling limit of the incipient infinite cluster in high-dimensional percolation. II. Integrated super-Brownian excursion

For independent nearest-neighbour bond percolation on Z^d with d >> 6, we prove that the incipient infinite cluster's two-point function and three-point function converge to those of integrated super-Brownian excursion (ISE) in the scaling limit. The proof is based on an extension of the new expansion for percolation derived in a previous paper, and involves treating the magnetic field as a complex variable. A special case of our result for the two-point function implies that the probability that the cluster of the origin consists of n sites, at the critical point, is given by a multiple of n^{-3/2}, plus an error term of order n^{-3/2-\epsilon} with \epsilon >0. This is a strong statement that the critical exponent delta is given by delta =2.Comment: 56 pages, 3 Postscript figures, in AMS-LaTeX, with graphicx, epic, and xr package

Correlation Spectroscopy of Minor Species: Signal Purification and Distribution Analysis

We are performing experiments that use fluorescence resonance energy transfer (FRET) and fluorescence correlation spectroscopy (FCS) to monitor the movement of an individual donor-labeled sliding clamp protein molecule along acceptor-labeled DNA. In addition to the FRET signal sought from the sliding clamp-DNA complexes, the detection channel for FRET contains undesirable signal from free sliding clamp and free DNA. When multiple fluorescent species contribute to a correlation signal, it is difficult or impossible to distinguish between contributions from individual species. As a remedy, we introduce ''purified FCS'' (PFCS), which uses single molecule burst analysis to select a species of interest and extract the correlation signal for further analysis. We show that by expanding the correlation region around a burst, the correlated signal is retained and the functional forms of FCS fitting equations remain valid. We demonstrate the use of PFCS in experiments with DNA sliding clamps. We also introduce ''single molecule FCS'', which obtains diffusion time estimates for each burst using expanded correlation regions. By monitoring the detachment of weakly-bound 30-mer DNA oligomers from a single-stranded DNA plasmid, we show that single molecule FCS can distinguish between bursts from species that differ by a factor of 5 in diffusion constant