13 research outputs found
Absence of the Filarial Endosymbiont Wolbachia in Seal Heartworm (Acanthocheilonema spirocauda) but Evidence of Ancient Lateral Gene Transfer
The symbiotic relationship of Wolbachia spp. was first observed in insects and subsequently in many parasitic filarial nematodes. This bacterium is believed to provide metabolic and developmental assistance to filarial parasitic nematodes, although the exact nature of this relationship remains to be fully elucidated. While Wolbachia is present in most filarial nematodes in the familyOnchocercidae, it is absent in several disparate species such as the human parasite Loa loa. All tested members of the genusAcanthocheilonema, such as Acanthocheilonema viteae, have been shown to lack Wolbachia. Consistent with this, we show thatWolbachia is absent from the seal heartworm (Acanthocheilonema spirocauda), but lateral gene transfer (LGT) of DNA sequences between Wolbachia and A. spirocauda has occurred, indicating a past evolutionary association. Seal heartworm is an important pathogen of phocid seals and understanding its basic biology is essential for conservation of the host. The findings presented here may allow for the development of future treatments or diagnostics for the disease and also aid in clarification of the complicated nematode–Wolbachia relationship
CMS Monte Carlo production in the WLCG computing Grid
Monte Carlo production in CMS has received a major boost in performance and
scale since the past CHEP06 conference. The production system has been re-engineered in order
to incorporate the experience gained in running the previous system and to integrate production
with the new CMS event data model, data management system and data processing framework.
The system is interfaced to the two major computing Grids used by CMS, the LHC Computing
Grid (LCG) and the Open Science Grid (OSG).
Operational experience and integration aspects of the new CMS Monte Carlo production
system is presented together with an analysis of production statistics. The new system
automatically handles job submission, resource monitoring, job queuing, job distribution
according to the available resources, data merging, registration of data into the data
bookkeeping, data location, data transfer and placement systems. Compared to the previous
production system automation, reliability and performance have been considerably improved. A
more efficient use of computing resources and a better handling of the inherent Grid unreliability
have resulted in an increase of production scale by about an order of magnitude, capable of
running in parallel at the order of ten thousand jobs and yielding more than two million events
per day
Design, performance, and calibration of CMS forward calorimeter wedges
We report on the test beam results and calibration methods using high energy electrons, pions and muons with the CMS forward calorimeter (HF). The HF calorimeter covers a large pseudorapidity region (3 <= vertical bar eta vertical bar <= 5), and is essential for a large number of physics channels with missing transverse energy. It is also expected to play a prominent role in the measurement of forward tagging jets in weak boson fusion channels in Higgs production. The HF calorimeter is based on steel absorber with embedded fused-silica-core optical fibers where Cherenkov radiation forms the basis of signal generation. Thus, the detector is essentially sensitive only to the electromagnetic shower core and is highly non-compensating (e/h approximate to 5). This feature is also manifest in narrow and relatively short showers compared to similar calorimeters based on ionization. The choice of fused-silica optical fibers as active material is dictated by its exceptional radiation hardness. The electromagnetic energy resolution is dominated by photoelectron statistics and can be expressed in the customary form as a/root E circle plus b. The stochastic term a is 198% and the constant term b is 9%. The hadronic energy resolution is largely determined by the fluctuations in the neutral pion production in showers, and when it is expressed as in the electromagnetic case, a = 280% and b = 11%