30 research outputs found
Sound analysis to predict the growth of Turkeys
Protocols for manual weighing of turkeys are not practical on turkey farms because of the large body sizes, heavy weights and flighty nature of turkeys. The sounds turkeys make may be a proxy for bird weights, but the relationship between turkey sounds and bird weights has not been studied. The aim of this study was to correlate peak frequency (PF) of vocalization with the age and weight of the bird and examine the possibility using PF to predict the weight of turkeys. The study consisted of four trials in Egypt. Sounds of birds and their weights were recorded for 11 days during the growth period in each trial. A total 2200 sounds were manually analyzed and labelled by extracting individual and general sounds on the basis of the amplitude and frequency of the sound signal. The PF of vocalizations in each trial, as well as in pooled trails, were evaluated to determine the relationship between PF and the age and weight of the turkey. PF exhibited a highly significant negative correlation with the weight and age of the turkeys showing that PF of vocalizations can be used for predicting the weight of turkeys. Further studies are necessary to refine the procedure
Loop Interactions during Catalysis by Dihydrofolate Reductase fromMoritella profunda
Dihydrofolate reductase (DHFR) is often used as a model system to
study the relation between protein dynamics and catalysis. We have studied a
number of variants of the cold-adapted DHFR from Moritella profunda
(MpDHFR), in which the catalytically important M20 and FG loops have been
altered, and present a comparison with the corresponding variants of the wellstudied
DHFR from Escherichia coli (EcDHFR). Mutations in the M20 loop do not
affect the actual chemical step of transfer of hydride from reduced nicotinamide
adenine dinucleotide phosphate to the substrate 7,8-dihydrofolate in the catalytic
cycle in either enzyme; they affect the steady state turnover rate in EcDHFR but
not in MpDHFR. Mutations in the FG loop also have different effects on catalysis
by the two DHFRs. Despite the two enzymes most likely sharing a common catalytic cycle at pH 7, motions of these loops,
known to be important for progression through the catalytic cycle in EcDHFR, appear not to play a significant role in MpDHFR
Genome-wide association study for systemic lupus erythematosus in an egyptian population
Systemic lupus erythematosus (SLE) susceptibility has a strong genetic component. Genome-wide association studies (GWAS) across trans-ancestral populations show both common and distinct genetic variants of susceptibility across European and Asian ancestries, while many other ethnic populations remain underexplored. We conducted the first SLE GWAS on Egyptians–an admixed North African/Middle Eastern population–using 537 patients and 883 controls. To identify novel susceptibility loci and replicate previously known loci, we performed imputation-based association analysis with 6,382,276 SNPs while accounting for individual admixture. We validated the association analysis using adaptive permutation tests (n = 109). We identified a novel genome-wide significant locus near IRS1/miR-5702 (Pcorrected = 1.98 × 10−8) and eight novel suggestive loci (Pcorrected 0.8) with lead SNPs from four suggestive loci (ARMC9, DIAPH3, IFLDT1, and ENTPD3) were associated with differential gene expression (3.5 × 10−95 < p < 1.0 × 10−2) across diverse tissues. These loci are involved in cellular proliferation and invasion—pathways prominent in lupus and nephritis. Our study highlights the utility of GWAS in an admixed Egyptian population for delineating new genetic associations and for understanding SLE pathogenesis
Efficacy of pulsed electromagnetic field on hemarthrotic knee in haemophilic adolescence
Background: Haemophilia is a hereditary coagulopathy disease affecting males. It is characterized by musculoskeletal bleeding, leading to chronic synovitis and severe joint hemarthrosis. Objective: To determine the impact of pulsed electro- magnetic field on swelling, range of motion and muscle strength of hemarthrotic knee joints of haemophilic adolescents. Participants and Methodology: Thirty haemophilic adolescent males ranging in age between thirteen and sixteen years who fulfilled the inclusion criteria participated in this study. They were assigned randomly into two groups of equal numbers A (control) and B (study). Groups A and B received a specific program of physical therapy for sixty minutes, in addition, group A received a placebo pulsed electromagnetic field for twenty minutes, while group B received pulsed electromagnetic field for twenty minutes. The treatment program was applied three days/week for three successive months. Evaluation of knee swelling using tape measurement, range of motion using electronic goniometer and muscle strength using isokinetic dynamometer was conducted for each patient of groups A and B before and after treatment. Results: Significant improvement was observed in the post-treatment mean values of the measuring variables of groups A and B when compared with their pre-treatment results (p < .05). High significant improvement was observed in group B when comparing the post-treatment results of groups, A and B (p < .05). Conclusions: Pulsed electromagnetic field is an effective modality which can be used with the traditional methods for treatment of knee hemarthrosis in haemophilic adolescents
Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
The 22q11.21 region is prone to low-copy repeats events that lead to congenital anomaly disorders. We tested genomic DNA of 20 families with non-syndromic CHD patients using a set of three known consecutive high polymorphic short tandem repeat (STR) markers along the 22q11.21 region; D22S941, D22S944 and D22S264 loci. We found loss of heterozygosity (LOH) in D22S941 locus in 2 out of 20 families (10%) with 2 offspring affected by ASD combined with PS and TOF respectively. No LOH found in D22S944 and D22S264 loci either in affected cases or control group and no LOH found in D22S941 in the control group. Also we observed that D22S944 locus prone to be less allele diversity than D22S941 and D22S264 loci. Keywords: 22q11.21 Microdeletion, Congenital heart defects, STR marker
المسح الجيوفيزيائي لتقييم المخاطر الجيولوجيه لمنطقة وادي ثول، المملكة العربية السعودية: حالة تاريخية
Antimicrobial Efficacy and HPLC Analysis of Polyphenolic Compounds in a Whole-Plant Extract of <i>Eryngium campestre</i>
Due to the constant increase in the number of plant diseases and the lack of available treatments, there has been a growing interest in plant extracts over the past few decades. Numerous studies suggest that plant extract molecules possess valuable antimicrobial activities, particularly against fungi and bacteria. This suggests that these biomaterials could potentially serve as attractive therapeutic options for the treatment of phytopathogen infections. In the present study, we investigated and analyzed the methanolic extract of Eryngium campestre L. whole plant extract using HPLC. The analysis revealed the presence of several polyphenolic constituents, with benzoic acid, catechol, quercetin, vanillic acid, resveratrol, naringenin, and quinol being the most abundant. The amounts of these constituents were determined to be 2135.53, 626.728, 579.048, 356.489, 323.41, 153.038, and 128.77 mg/kg, respectively. Furthermore, we isolated and identified different plant fungal and bacterial isolates from symptomatic potato plants, which were accessioned as Rhizoctonia solani (OQ880458), Fusarium oxysporum (OQ820156) and Fusarium solani (OQ891085), Ralstonia solanacearum (OQ878653), Dickeya solani (OQ878655), and Pectobacterium carotovorum (OQ878656). The antifungal activity of the extract was assessed using fungal growth inhibitions (FGI) at concentrations of 100, 200, and 300 µg/mL. The results showed that at the lowest concentration tested (100 µg/mL), the extract exhibited the highest effectiveness against R. solani with an FGI of 78.52%, while it was least effective against F. solani with an FGI of 61.85%. At the highest concentration tested, the extract demonstrated the highest effectiveness against R. solani and F. oxysporum, with FGIs of 88.89% and 77.04%, respectively. Additionally, the extract displayed a concentration-dependent inhibitory effect on all three bacterial pathogens. At the highest concentration tested (3000 µg/mL), the extract was able to inhibit the growth of all three bacterial pathogens, although the inhibition zone diameter varied. Among the bacterial pathogens, D. solani exhibited the highest sensitivity to the extract, as it showed the largest inhibition zone diameter at most of the extract concentrations. These findings highlight the potential of the E. campestre extract as a source of natural antimicrobial agents for controlling various plant pathogens. Consequently, it offers a safer alternative to the currently employed protective methods for plant disease management
Molecular Diversity and Combining Ability in Newly Developed Maize Inbred Lines under Low-Nitrogen Conditions
Nitrogen is an essential element for maize growth, but excessive application can lead to various environmental and ecological issues, including water pollution, air pollution, greenhouse gas emissions, and biodiversity loss. Hence, developing maize hybrids resilient to low-N conditions is vital for sustainable agriculture, particularly in nitrogen-deficient soils. Combining ability and genetic relationships among parental lines is crucial for breeding superior hybrids under diverse nitrogen levels. This study aimed to assess the genetic diversity of maize inbred lines using simple sequence repeat (SSR) markers and evaluate their combining ability to identify superior hybrids under low-N and recommended conditions. Local and exotic inbred lines were genotyped using SSR markers, revealing substantial genetic variation with high gene diversity (He = 0.60), moderate polymorphism information content (PIC = 0.54), and an average of 3.64 alleles per locus. Twenty-one F1 hybrids were generated through a diallel mating design using these diverse lines. These hybrids and a high yielding commercial check (SC-131) were field-tested under low-N and recommended N conditions. Significant variations (p < 0.01) were observed among nitrogen levels, hybrids, and their interaction for all recorded traits. Additive genetic variances predominated over non-additive genetic variances for grain yield and most traits. Inbred IL3 emerged as an effective combiner for developing early maturing genotypes with lower ear placement. Additionally, inbreds IL1, IL2, and IL3 showed promise as superior combiners for enhancing grain yield and related traits under both low-N and recommended conditions. Notably, hybrids IL1×IL4, IL2×IL5, IL2×IL6, and IL5×IL7 exhibited specific combining abilities for increasing grain yield and associated traits under low-N stress conditions. Furthermore, strong positive associations were identified between grain yield and specific traits like plant height, ear length, number of rows per ear, and number of kernels per row. Due to their straightforward measurability, these relationships underscore the potential of using these traits as proxies for indirect selection in early breeding generations, particularly under low-N stress. This research contributes to breeding nitrogen-efficient maize hybrids and advances our understanding of the genetic foundations for tolerance to nitrogen limitations