Synthesis and characterization of water dispersible conjugated polymer nanoparticles

Ankara : The Department of Chemistry and the Graduate School of Engineering and Science of Bilkent Universıty., 2011.Thesis (Master's) -- Bilkent University, 2011.Includes bibliographical references leaves 76-79.In this study, novel water dispersible conjugated polymer nanoparticles having various potential applications in the areas including biomedicine and photonics have been synthesized from blue, green and yellow light emitting conjugated polymers. Their sizes, morphology, surface charges and optical properties have been determined using various techniques. Cell viability of nanoparticles was tested in mesenchymal stem cells. For the synthesis of nanoparticles, first the following polymers carrying a number of different functional groups and based on derivatives of fluorene and benzothiodiazole monomers are designed and synthesized using the Suzuki coupling reactions: Poly[(9,9-bis{propeny}fluorenyl-2,7-diyl)-co-(9,9-dihexyl-9H-fluorene)] (P1), poly[(9,9-bis{carboxymethylsulfonyl-propyl}fluorenyl-2,7-diyl)-co-(9,9-dihexyl-9Hfluorene) (P2), poly[(9,9- bis{propeny}fluorenyl-2,7-diyl))-co-(1,4-benzo-{2,1,3}- thiodiazole)] (P3), poly[(9,9- bis{carboxymethylsulfonyl-propyl}fluorenyl-2,7-diyl)- co(1,4-benzo-{2,1,3}-thiodiazole)] (P4), poly[(9,9-bis{3-bromopropyl}fluorenyl- 2,7-diyl)-co-(1,4-benzo-{2,1,3}-thiodiazole)] (P5), poly[(9,9-bis{3- azidopropyl}fluorenyl-2,7-diyl)-co-(benzothiadiazole)] (P6). Polymers were characterized by using spectroscopic techniques such as 1H-NMR, FT-IR, UV-Vis, Fluorescence spectrophotometer and Gel Permeation Chromatography (GPC). Conjugated polymers carry functional groups on their side chains, such as azide and allyl groups that can be cross-linkable using UV light to form shape-persistent, stable nanoparticles. Nanoparticles were characterized by various techniques before and after UV-treatment. Their sizes and morphologies were determined by using dynamic light scattering measurements (DLS) and imaging techniques such as scanning electron microscopy (SEM) and atomic force microscopy (AFM). For optical characterization UV-vis, fluorescent spectroscopies and FT-IR were used. CNPs affect on cells shows their nontoxic and biocompatible properties which give opportunity to use them in cell imaging.İbrahimova, VusalaM.S

Development of polypeptide-based multifunctional nano-assemblies for a theranostic approach

Dans ce travail, nous avons développé des nanostructures théranostics à base de polypeptides fonctionnalisées avec un photosensibilisateur (PTS) dans le but d’être utilisées en thérapie photodynamique (PDT). La génération d'oxygène singulet et les propriétés de fluorescence du PTS peuvent ainsi à la fois diagnostiquer et traiter une tumeur. Un dérivé asymétrique et multifonctionnel de l'aza-dipyrrométhènes difluorure de bore chélate (aza-BODIPY) fluorogène a été synthétisé pour être utilisé comme photosensibilisateur en raison de ses propriétés non toxiques, son insensibilité à l'environnement biologique externe, sa production d'oxygène singulet élevée et son important rendement quantique de fluorescence. Pour permettre au photosensibilisant d’atteindre la tumeur, quatre copolymères à blocs amphiphiles différents en termes de localisation du PTS et de la longueur de la chaîne PEG ont été synthétisés. Les blocs amphiphiles sont constitués de segments poly(ɤ-benzyl-L-glutamate) (PBLG, DP ~ 50) et poly(éthylène glycol) (PEG, DP = 45 et 113). Ces copolymères sont en outre capables de s’auto-assembler en micelles et en vésicules. Nous avons développé une stratégie de synthèse permettant la liaison covalente du PTS pour les copolymères à blocs amphiphiles, empêchant ainsi une fuite du PTS avant que le nanoparticules atteignent le site de la tumeur. En outre, nous avons étudié l'activité du PTS en fonction de la concentration, de la morphologie des nanoparticules et de la localisation du PTS dans les nanoparticules. Enfin, l'efficacité des nanoparticules a été évaluée in vitro sur des cellules HeLa et B16F1.In this work, we developed photosensitizer (PTS) functionalized polypeptide-based theranostic nano-assemblies to be used in photodynamic therapy (PDT). The singlet oxygen generation and fluorescence properties of the PTS provide simultaneous diagnosis and therapy of the tumor.An asymmetric and multifunctional derivative of the aza-dipyrromethene boron difluoride chelate (aza-BODIPY) fluorophore was synthesized to be used as a photosensitizer due to its nontoxic properties, insensitivity to external biological environment, high singlet oxygen generation and fluorescent quantum yield. To carry the photosensitizer to the tumor, four different (in terms of PTS localization and PEG chain length) amphiphilic block copolymers consisting of poly(ɤ-benzyl-L-glutamate) (PBLG, DP~50) and poly(ethylene glycol) (PEG, DP=45 and 113) chains, able to self-assembled into micelles and vesicles, were synthesized. We developed a synthetic strategy allowing covalent linkage of PTS to the amphiphilic block copolymers, thus preventing PTS leakage before the nano-assembly reaches the tumor site. Moreover, we investigated PTS activity as a function of concentration, morphology of the nano-assemblies and PTS localization in the nano-assemblies. Finally, the efficacy of the nano-assemblies has been evaluated in vitro on HeLa and B16F1 cells

Development of polypeptide-based multifunctional nano-assemblies for a theranostic approach

Photodynamic therapy (PDT) becomes a major area in cancer treatment due to its selectivity and lesser damage to healthy cells compared to traditional treatment methods like surgery, chemotherapies, etc. In this thesis, we developed photosensitizer (PTS) functionalized polypeptide-based theranostic nano-assemblies to be used in photodynamic therapy. The singlet oxygen generation and fluorescence properties of the PTS provide simultaneous diagnosis and therapy of the tumor. An asymmetric and multifunctional derivative of an azadipyrromethene boron difluoride chelate (aza-BODIPY) fluorophore was synthesized to be used as a photosensitizer. To carry the photosensitizer to the tumor, we developed the synthesis of PTS functionalized amphiphilic block copolymers consisting of poly(ɤ benzyl-L-glutamate) as hydrophobic block, and poly(ethylene glycol) as hydrophilic block. The selfassembly in water of these copolymers, differing in terms of PTS localization and PEG chain length, was studied, and we showed that they are able to form micelles or vesicles. Moreover, we investigated the PTS activity in these nano-assemblies as a function of concentration, morphology of the nano-assemblies and PTS localization in the nano-assemblies by spectroscopic techniques. Finally, the efficacy of the nano-assemblies has been evaluated in vitro on HeLa and B16F1 cells.(SC - Sciences) -- UCL, 1

Development of polypeptide-based multifunctional nano-assemblies for a theranostic approach

Dans ce travail, nous avons développé des nanostructures théranostics à base de polypeptides fonctionnalisées avec un photosensibilisateur (PTS) dans le but d’être utilisées en thérapie photodynamique (PDT). La génération d'oxygène singulet et les propriétés de fluorescence du PTS peuvent ainsi à la fois diagnostiquer et traiter une tumeur. Un dérivé asymétrique et multifonctionnel de l'aza-dipyrrométhènes difluorure de bore chélate (aza-BODIPY) fluorogène a été synthétisé pour être utilisé comme photosensibilisateur en raison de ses propriétés non toxiques, son insensibilité à l'environnement biologique externe, sa production d'oxygène singulet élevée et son important rendement quantique de fluorescence. Pour permettre au photosensibilisant d’atteindre la tumeur, quatre copolymères à blocs amphiphiles différents en termes de localisation du PTS et de la longueur de la chaîne PEG ont été synthétisés. Les blocs amphiphiles sont constitués de segments poly(ɤ-benzyl-L-glutamate) (PBLG, DP ~ 50) et poly(éthylène glycol) (PEG, DP = 45 et 113). Ces copolymères sont en outre capables de s’auto-assembler en micelles et en vésicules. Nous avons développé une stratégie de synthèse permettant la liaison covalente du PTS pour les copolymères à blocs amphiphiles, empêchant ainsi une fuite du PTS avant que le nanoparticules atteignent le site de la tumeur. En outre, nous avons étudié l'activité du PTS en fonction de la concentration, de la morphologie des nanoparticules et de la localisation du PTS dans les nanoparticules. Enfin, l'efficacité des nanoparticules a été évaluée in vitro sur des cellules HeLa et B16F1.In this work, we developed photosensitizer (PTS) functionalized polypeptide-based theranostic nano-assemblies to be used in photodynamic therapy (PDT). The singlet oxygen generation and fluorescence properties of the PTS provide simultaneous diagnosis and therapy of the tumor.An asymmetric and multifunctional derivative of the aza-dipyrromethene boron difluoride chelate (aza-BODIPY) fluorophore was synthesized to be used as a photosensitizer due to its nontoxic properties, insensitivity to external biological environment, high singlet oxygen generation and fluorescent quantum yield. To carry the photosensitizer to the tumor, four different (in terms of PTS localization and PEG chain length) amphiphilic block copolymers consisting of poly(ɤ-benzyl-L-glutamate) (PBLG, DP~50) and poly(ethylene glycol) (PEG, DP=45 and 113) chains, able to self-assembled into micelles and vesicles, were synthesized. We developed a synthetic strategy allowing covalent linkage of PTS to the amphiphilic block copolymers, thus preventing PTS leakage before the nano-assembly reaches the tumor site. Moreover, we investigated PTS activity as a function of concentration, morphology of the nano-assemblies and PTS localization in the nano-assemblies. Finally, the efficacy of the nano-assemblies has been evaluated in vitro on HeLa and B16F1 cells

Développement de nano-structures multifonctionnelles à base de polypeptide pour une approche théranostique

In this work, we developed photosensitizer (PTS) functionalized polypeptide-based theranostic nano-assemblies to be used in photodynamic therapy (PDT). The singlet oxygen generation and fluorescence properties of the PTS provide simultaneous diagnosis and therapy of the tumor.An asymmetric and multifunctional derivative of the aza-dipyrromethene boron difluoride chelate (aza-BODIPY) fluorophore was synthesized to be used as a photosensitizer due to its nontoxic properties, insensitivity to external biological environment, high singlet oxygen generation and fluorescent quantum yield. To carry the photosensitizer to the tumor, four different (in terms of PTS localization and PEG chain length) amphiphilic block copolymers consisting of poly(ɤ-benzyl-L-glutamate) (PBLG, DP~50) and poly(ethylene glycol) (PEG, DP=45 and 113) chains, able to self-assembled into micelles and vesicles, were synthesized. We developed a synthetic strategy allowing covalent linkage of PTS to the amphiphilic block copolymers, thus preventing PTS leakage before the nano-assembly reaches the tumor site. Moreover, we investigated PTS activity as a function of concentration, morphology of the nano-assemblies and PTS localization in the nano-assemblies. Finally, the efficacy of the nano-assemblies has been evaluated in vitro on HeLa and B16F1 cells.Dans ce travail, nous avons développé des nanostructures théranostics à base de polypeptides fonctionnalisées avec un photosensibilisateur (PTS) dans le but d’être utilisées en thérapie photodynamique (PDT). La génération d'oxygène singulet et les propriétés de fluorescence du PTS peuvent ainsi à la fois diagnostiquer et traiter une tumeur. Un dérivé asymétrique et multifonctionnel de l'aza-dipyrrométhènes difluorure de bore chélate (aza-BODIPY) fluorogène a été synthétisé pour être utilisé comme photosensibilisateur en raison de ses propriétés non toxiques, son insensibilité à l'environnement biologique externe, sa production d'oxygène singulet élevée et son important rendement quantique de fluorescence. Pour permettre au photosensibilisant d’atteindre la tumeur, quatre copolymères à blocs amphiphiles différents en termes de localisation du PTS et de la longueur de la chaîne PEG ont été synthétisés. Les blocs amphiphiles sont constitués de segments poly(ɤ-benzyl-L-glutamate) (PBLG, DP ~ 50) et poly(éthylène glycol) (PEG, DP = 45 et 113). Ces copolymères sont en outre capables de s’auto-assembler en micelles et en vésicules. Nous avons développé une stratégie de synthèse permettant la liaison covalente du PTS pour les copolymères à blocs amphiphiles, empêchant ainsi une fuite du PTS avant que le nanoparticules atteignent le site de la tumeur. En outre, nous avons étudié l'activité du PTS en fonction de la concentration, de la morphologie des nanoparticules et de la localisation du PTS dans les nanoparticules. Enfin, l'efficacité des nanoparticules a été évaluée in vitro sur des cellules HeLa et B16F1

Dynamic Spatial Formation and Distribution of Intrinsically Disordered Protein Droplets in Macromolecularly Crowded Protocells

Elastin‐like polypeptides (ELPs) have been proposed as a simple model of intrinsically disordered proteins (IDPs) which can form membrane‐less organelles via liquid‐liquid phase separation (LLPS) in cellular milieu. Herein, fluorescently labeled ELP is studied in cytomimetic aqueous two‐phase system (ATPS). Droplet‐based protocells are obtained in a microfluidic system, allowing for confinement, temperature changes and statistical analysis. The spatial organization of ELP is observed in such binary ATPS macrocrowders. In addition, owing to switch of conformational states, dynamic formation and distribution of ELP‐rich droplets within the artificial cytoplasm is triggered by temperature. Three‐dimensional structured proteins are concurrently encapsulated along with ELP in synthetic cells and distinct partitioning properties of these proteins and ELP in binary polymeric phases are observed. This underpinning discovery demonstrates that the ability of ELP to coacervate with temperature can be maintained inside intracellular mimetic medium, and the preferential distribution of ELP in macromolecular crowding.IdEx BordeauxTemperature-responsive polypeptide nanocarriers for abdominal therapie

Angew Chem Int Ed Engl

Biomimetic design to afford smart functional biomaterials with exquisite properties represents synthetic challenges and provides unique perspectives. In this context, elastin-like polypeptides (ELPs) recently became highly attractive building blocks in the development of lipoprotein-based membranes. In addition to the bioengineered post-translational modifications of genetically encoded recombinant ELPs developed so far, we report here a simple and versatile method to design biohybrid brush-like lipid-grafted-ELPs using chemical post-modification reactions. We have explored a combination of methionine alkylation and click chemistry to create a new class of hybrid lipoprotein mimics. Our design allowed the formation of biomimetic vesicles with controlled permeability, correlated to the temperature-responsiveness of ELPs.Temperature-responsive polypeptide nanocarriers for abdominal therapie

Optical and Electronic Properties of Fluorene-Based Copolymers and Their Sensory Applications

A series of novel, fluorene-based conjugated copolymers, poly[(9,9-bis{propenyl}-9H-fluorene)-co-(9,9-dihexyl-9H-fluorene)] (P1), poly[(9,9-bis{carboxymethylsulfonyl-propyl}-fluorenyl-2,7-diyl)-co-(9,9-dihexyl-9H-fluorene)] (P2) and poly[(9,9-dihexylfluorene)-co-alt-(9,9-bis-(6-azidohexyl)fluorene)] (P3), are synthesized by Suzuki coupling reactions and their electrochemical properties, in the form of films, are investigated using cyclic voltammetry. The results reveal that the polymer films exhibit electrochromic properties with a pseudo-reversible redox behavior; transparent in the neutral state and dark violet in the oxidized state. Among the three polymers, P2 possesses the shortest response time and the highest coloration efficiency value. These polymers emit blue light with a band gap value of around 2.9 eV and have high fluorescent quantum yields. Their metal ion sensory abilities are also investigated by titrating them with a number of different transition metal ions; all of these polymers exhibit a higher selectivity toward Fe3+ ions than the other ions tested with Stern-Volmer constants of 4.41 x 10(6) M-1, 3.28 x 10(7) M-1, 1.25 x 10(6) M-1, and 6.56 x 10(6) M-1 for P1, P2, water soluble version of P2 (P2S) and P3, respectively. (C) 2012 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2013, 51, 815-82

Adv Mater

In response to variations in osmotic stress, in particular to hypertonicity associated with biological dysregulations, cells have developed complex mechanisms to release their excess water, thus avoiding their bursting and death. When water is expelled, cells shrink and concentrate their internal bio(macro)molecular content, inducing the formation of membraneless organelles following a liquid-liquid phase separation (LLPS) mechanism. To mimic this intrinsic property of cells, functional thermo-responsive elastin-like polypeptide (ELP) biomacromolecular conjugates are herein encapsulated into self-assembled lipid vesicles using a microfluidic system, together with polyethylene glycol (PEG) to mimic cells' interior crowded microenvironment. By inducing a hypertonic shock onto the vesicles, expelled water induces a local increase of concentration and a concomitant decrease of the cloud point temperature (T ) of ELP bioconjugates that phase separate and form coacervates mimicking cellular stress-induced membraneless organelle assemblies. Horseradish peroxidase (HRP), as a model enzyme, is bioconjugated to ELPs and is locally confined in coacervates as a response to osmotic stress. This consequently increases local HRP and substrate concentrations and accelerates the kinetics of the enzymatic reaction. These results illustrate a unique way to fine-tune enzymatic reactions dynamically as a response to a physiological change in isothermal conditions. This article is protected by copyright. All rights reserved

Adv Sci (Weinh)

Design of reversible organelle-like microcompartments formed by liquid-liquid phase separation in cell-mimicking entities has significantly advanced the bottom-up construction of artificial eukaryotic cells. However, organizing the formation of artificial organelle architectures in a spatiotemporal manner within complex primitive compartments remains scarcely explored. In this work, thermoresponsive hybrid polypeptide-polymer conjugates are rationally engineered and synthesized, resulting from the conjugation of an intrinsically disordered synthetic protein (IDP), namely elastin-like polypeptide, and synthetic polymers (poly(ethylene glycol) and dextran) that are widely used as macromolecular crowding agents. Cell-like constructs are built using droplet-based microfluidics that are filled with such bioconjugates and an artificial cytoplasm system that is composed of specific polymers conjugated to the IDP. The distinct spatial organizations of two polypeptide-polymer conjugates and the dynamic assembly and disassembly of polypeptide-polymer coacervate droplets in response to temperature are studied in the cytomimetic protocells. Furthermore, a monoblock IDP with longer length is concurrently included with bioconjugates individually inside cytomimetic compartments. Both bioconjugates exhibit an identical surfactant-like property, compartmentalizing the monoblock IDP coacervates via temperature control. These findings lay the foundation for developing hierarchically structured synthetic cells with interior organelle-like structures which could be designed to localize in desired phase-separated subcompartments