49 research outputs found
A New L-Proline Amide Hydrolase with Potential Application within the Amidase Process
This research was supported by the Spanish Ministry of Science and Innovation/FEDER funds grant PID2020-116261GB-I00/AEI/10.13039/501100011033 (JAG), from the FEDER/Junta de Andalucia-Consejeria de Transformacion Economica, Industria, Conocimiento y Universidades grants P18-FR-3533 (LAC) and P12-FQM-790 (RCM), and from the University of Granada grant PPJI2017-1 (SMR).L-proline amide hydrolase (PAH, EC 3.5.1.101) is a barely described enzyme belonging to the peptidase S33 family, and is highly similar to prolyl aminopeptidases (PAP, EC. 3.4.11.5). Besides being an S-stereoselective character towards piperidine-based carboxamides, this enzyme also hydrolyses different L-amino acid amides, turning it into a potential biocatalyst within the Amidase Process. In this work, we report the characterization of L-proline amide hydrolase from Pseudomonas syringae (PsyPAH) together with the first X-ray structure for this class of L-amino acid amidases. Recombinant PsyPAH showed optimal conditions at pH 7.0 and 35 degrees C, with an apparent thermal melting temperature of 46 degrees C. The enzyme behaved as a monomer at the optimal pH. The L-enantioselective hydrolytic activity towards different canonical and non-canonical amino-acid amides was confirmed. Structural analysis suggests key residues in the enzymatic activity.Spanish GovernmentEuropean Commission PID2020-116261GB-I00/AEI/10.13039/501100011033FEDER/Junta de Andalucia-Consejeria de Transformacion Economica, Industria, Conocimiento y Universidades P18-FR-3533
P12-FQM-790University of Granada PPJI2017-1
CTS-20
Chirality-induced Spin Selectivity in Functionalized Carbon Nanotube Networks: The Role of Spin-orbit Coupling
Spin–orbit coupling in a chiral medium is generally assumed to be a necessary ingredient for the observation of the chirality-induced spin selectivity (CISS) effect. However, some recent studies have suggested that CISS may manifest even when the chiral medium has zero spin–orbit coupling. In such systems, CISS may arise due to an orbital polarization effect, which generates an electromagnetochiral anisotropy in two-terminal conductance. Here, we examine these concepts using a chirally functionalized carbon nanotube network as the chiral medium. A transverse measurement geometry is used, which nullifies any electromagnetochiral contribution but still exhibits the tell-tale signs of the CISS effect. This suggests that CISS may not be explained solely by electromagnetochiral effects. The role of nanotube spin–orbit coupling on the observed pure CISS signal is studied by systematically varying nanotube diameter. We find that the magnitude of the CISS signal scales proportionately with the spin–orbit coupling strength of the nanotubes. We also find that nanotube diameter dictates the supramolecular chirality of the medium, which in turn determines the sign of the CISS signal
Self-assembly in magnetic supramolecular hydrogels
Most recent advances in the synthesis of supramolecular hydrogels based on low molecular weight gelators (LMWGs) have focused on the development of novel hybrid hydrogels, combining LMWGs and different additives. The dynamic nature of the noncovalent interactions of supramolecular hydrogels, together with the specific properties of the additives included in the formulation, allow these novel hybrid hydrogels to present interesting features, such as stimuli-responsiveness, gel-sol reversibility, self-healing and thixotropy, which make them very appealing for multiple biomedical and biotechnological applications. In particular, the inclusion of magnetic nanoparticles in the hydrogel matrix results in magnetic hydrogels, a particular type of stimuli-responsive materials that respond to applied magnetic fields. This review focuses on the recent advances in the development of magnetic supramolecular hydrogels, with special emphasis in the role of the magnetic nanoparticles in the self-assembly process, as well as in the exciting applications of these materials
Novel Oleanolic and Maslinic Acids derivatives as a promising treatment against bacterial biofilm in nosocomial infections: An in Vitro and in Vivo study.
Oleanolic acid (OA) and maslinic acid (MA) are pentacyclic triterpenic compounds that abound in industrial olive oil waste. These compounds have renowned antimicrobial properties and lack cytotoxicity in eukaryotic cells as well as resistance mechanisms in bacteria. Despite these advantages, their antimicrobial activity has only been tested in vitro, and derivatives improving this activity have not been reported. In this work, a set of 14 OA and MA C-28 amide derivatives have been synthesized. Two of these
derivatives, MA-HDA and OA-HDA, increase the in vitro antimicrobial activity of the parent compounds while reducing their toxicity in most of the Gram-positive bacteria tested, including a methicillin-resistant Staphylococcus aureus-MRSA. MA-HDA also shows an enhanced in vivo efficacy in a Galleria mellonella invertebrate animal model of infection. A preliminary attempt to elucidate their mechanism of action revealed that these compounds are able to penetrate and damage the bacterial cell membrane. More significantly, their capacity to reduce antibiofilm formation in catheters has also been demonstrated in two sets of conditions: a static and a more challenged continuous-flow S. aureus biofilm.This study was partially supported by grants from the Ministerio de Economiá , Industria y Competitividad, MINECO, and Agencia Estatal de Investigación, AEI, Spain, cofunded by Fondo Europeo de Desarrollo Regional, FEDER, European Union (BIO2015−63557-R, FIS2017−85954-R and RTI2018−098573-B-100)
Enantiopure Double ortho-Oligophenylethynylene-Based Helical Structures with Circularly Polarized Luminescence Activity
We thank the Ministerio de Economia y Competitividad (CTQ2017-85454-C2-1-P and CTQ2017-85454-C2-2-P), Ministerio de Ciencia e Innovacion (PID2020-113059GB-C21 and PID2020-113059GB-C22) and Junta de Andalucia (P20.00162) (Spain) for funding and P.R. and A. O. G. also for FPU contracts. Funding for open access charge is acknowledged to Universidad de Granada / CBUA.We also thank Big&Open Data Innovation Laboratory (BODaI-Lab), University of Brescia, granted by Fondazione Cariplo and Regione Lombardia, for access to resources of Computing Center CINECA (Bologna), Italy. Support from the Italian MIUR (Grant No. 2017A4XRCA) is also acknowledged.In this paper, we describe the optical and chiroptical properties
of an enantiopure multipodal ortho-oligophenylethynylene
(S,S,S,S)-1 presenting four chiral sulfoxide groups at the
extremes. The presence of these groups together with alkynes
allows the coordination with carbophilic Ag(I), and/or oxophilic
Zn(II) cations, yielding double helical structures in an enantiopure
way. In this sense, different behaviors in absorption,
fluorescence, ECD and CPL spectra have been found depending
on the stoichiometry and nature of the metal. We have
observed that Zn(II) coordination favors an intensity increase of
the electronic circular dichroism (ECD) spectra of compound
(S,S,S,S)-1 yielding an M-helicity in the ortho-oligophenylene
ethynylene (o-OPE) backbone. On the other hand, ECD spectra
of final Ag(I) complex shows two different bands with an
opposite sign to the free ligand, thus giving the P-helical
isomer. In addition, circularly polarized luminescence (CPL)
exhibit an enhanced intensity and negative sign in both
complexes. Computational studies were also carried out,
supporting the experimental results.Spanish Government CTQ2017-85454-C2-1-P
CTQ2017-85454-C2-2-PInstituto de Salud Carlos III
Spanish Government
European Commission PID2020-113059GB-C21
PID2020-113059GB-C22Junta de Andalucia
European Commission P20.00162University of Brescia / CBUAFondazione CariploMinistry of Education, Universities and Research (MIUR) 2017A4XRCARegione Lombardi
Lysozyme crystallization in hydrogel media under ultrasound irradiation
Sonocrystallization implies the application of ultrasound radiation to control the nucleation and crystal growth
depending on the actuation time and intensity. Its application allows to induce nucleation at lower supersaturations
than required under standard conditions. Although extended in inorganic and organic crystallization, it
has been scarcely explored in protein crystallization. Now, that industrial protein crystallization is gaining
momentum, the interest on new ways to control protein nucleation and crystal growth is advancing. In this work
we present the development of a novel ultrasound bioreactor to study its influence on protein crystallization in
agarose gel. Gel media minimize convention currents and sedimentation, favoring a more homogeneous and
stable conditions to study the effect of an externally generated low energy ultrasonic irradiation on protein
crystallization avoiding other undesired effects such as temperature increase, introduction of surfaces which
induce nucleation, destructive cavitation phenomena, etc. In-depth statistical analysis of the results has shown
that the impact of ultrasound in gel media on crystal size populations are statistically significant and
reproducible.MCIN/AEI PID2020-118498GB-I00
PID2020-116261GB-I00
PID2020-115372RB-I00
MCIN/AEI/FEDER "Una manera de hacer Europa", Spain PID2019-106947RA-C22FEDER/Junta de Andalucia-Consejeria de Transformacion Economica, Industria, Conocimiento y Universidades (Spain) A-FQM-340-UGR20
P18-FR-3533
P18-RT-1653
BTEP-026-UGR1
Biomedical applications of magnetic hydrogels
Hydrogels are used in biomedical applications thanks to their high-water content, porosity, and their ability to easily modify their properties (mechanical, chemical, microstructure, etc.). Hydrogels are the materials that most resemble the extracellular matrix of mammals. In recent years, magnetic hydrogels have become especially important. These are the result of combining magnetic nanoparticles with different hydrogel matrices. Among its properties, they have the ability to be remotely controlled modifying their physical properties, such as stability, stiffness and temperature (magnetic hyperthermia). Such unique characteristics make magnetic hydrogels very promising in biomedical applications such as, tissue engineering, drug delivery, biosensors, and cancer therapy. At this respect, this chapter focuses on the main biomedical applications of magnetic hydrogels and the most important discoveries on the subject.This study was supported by project FIS2017?85954-R (Ministerio de Economía, Industria y Competitividad, MINECO, and Agencia Estatal de Investigación, AEI, Spain, cofunded by Fondo Europeo de Desarrollo Regional, FEDER, European Union). CGV acknowledges
financial support by Ministerio de Ciencia, Innovación y Universidades and University of Granada, Spain, for her FPU17/00491 grant
Extending the pool of compatible peptide hydrogels for protein crystallization
Short-peptide supramolecular (SPS) hydrogels are a class of materials that have been found
to be useful for (bio)technological applications thanks to their biocompatible nature. Among the
advantages reported for these peptides, their economic a ordability and easy functionalization or
modulation have turned them into excellent candidates for the development of functional biomaterials.
We have recently demonstrated that SPS hydrogels can be used to produce high-quality protein
crystals, improve their properties, or incorporate relevant materials within the crystals. In this work,
we prove that hydrogels based on methionine and tyrosine are also good candidates for growing
high-quality crystals of the three model proteins: lysozyme, glucose isomerase, and thaumatin.This study was supported by projects BIO2016-74875-P and FIS2017-85954-R (Ministerio de Economía,
Industria y Competitividad, MINECO, and Agencia Estatal de Investigación, AEI, Spain, cofunded by Fondo
Europeo de Desarrollo Regional, FEDER, European Union)
Exploring Potentialities and Limitations of Stapled o- Oligo(PhenyleneEthynylene)s (o-OPEs) as Efficient Circularly Polarized Luminescence Emitters
In this paper we have studied the chiroptical properties of a family of o-OPE derivatives with different steric hindrance. Experimental results show high dissymmetry factors (gabs and glum up to 1.1x10-2) and very similar ECD and CPL for all the derivatives, that makes this basic o-OPE scaffold a robust pure organic emitter. VCD spectra are used to characterize conformational properties in solution.
DFT and TD-DFT calculations support experimental results also proving that ECD and CPL are almost exclusively linked to helical moiety and not to size or conformation of substituents. As chiroptical properties of these emitters are independent of substituents, this OPE scaffold can be used as basic skeleton for the design of sensing probes with high CPL efficiencies.We thank MICINN (CTQ2014-53598-R) and Junta de Andalucía (FQM1484) for financial support. Computing Center CINECA Via Magnanelli 6/3 40033 – Casalecchio di Reno (Bologna) Italy and Regione Lombardia for the LISA Grant No. “ChiPhyto: HPL13POZE1” is acknowledged for access to computational facilities. P. Reiné thanks MICINN for a FPU fellowship
Conductance and application of organic molecule pairs as nanofuses
We propose that a pair of organic molecules can mimic the behavior of a macroscopic fuse at nanoscale, one component of the pair being the on state and the other the off state. For this task wemake use of density-functional theory to calculate the physical properties of selected molecules, which have also been synthesized by our team. By this means we obtain the transmission spectra and the current of the proposed devices, which allows us to compare the behavior of the on and off states.Of particular interest is the on/off switch ratios, defined as the current ratios of the on and off structures at the corresponding bias voltage. In a first stage, we examine the best linker between the device and the electrode for high on/off switch ratios. Once this is determined, we test the influence of the electron richness of the system to provide a high on/off switch ratio. The entire analysis is also supported by the molecular projected self-consistent Hamiltonian, which provides a good way of understanding the molecular behavior. All the calculations support that interesting on/off switch ratios of two orders of magnitude could be obtained with these prototypical nanofusesWe thank the Regional Government of Andalucía for financial support (Projects No. P06-FQM-01726 and No. P09-FQM-04571), the “Centro de Supercomputación de la Universidad de Granada,” and the “Centro de Computación Científica-UAM” for computation time. The authors are also grateful to the Spanish Secretaría de Estado de Universidades e Investigación, Ministerio de Educación y Ciencia, for financial support within research projects TEC2007-66812 and TEC2010-16211. N.F. thanks the Regional Government of Andalucía for her research contract, and LAC thanks the University of Granada for his research contrac