Capacitance-based microvolume liquid-level sensor array

A prototype sensor array was developed for use with laboratory automation to permit closed-loop control of liquid-levels in a multiwell microplate geometry. A simple electrical model for non-contact capacitance-based fluid sensors was extended to describe a fluid-level dependency. The new model shows that a charge-transfer based capacitance transducer employing a liquid-specific calibration can be used to obtain an output signal that varies linearly with the liquid-level when fringe-field effects are negligible. The calibration also compensates for liquid-to-liquid conductivity and permittivity differences.The sensor was tested using sodium chloride (NaCl) and ethanol solutions to simulate the range of conductivity and permittivity typical in biological and chemical research. Measured capacitance was a second-order function of liquid volume due to fringe-field effects and was compensated for by adding a hardware-based calibration. Liquid-volume measurement error averaged 0.2% of the 120mul fill volume with a standard deviation of 0.6% (< mul). The maximum absolute error for all liquids was 2.7% (3mul)

Cardiac troponin I in dogs anaesthetized with propofol and sevoflurane: the influence of medetomidine premedication and inspired oxygen fraction

Objective To investigate changes in serum cardiac troponin I (cTnI) concentrations in dogs in which medetomidine was used for sedation or for premedication prior to anaesthesia with propofol and sevoflurane. Study design Prospective clinical study. Animals A total of 66 client-owned dogs. Methods The dogs were sedated with medetomidine (0.04 mg kg(-1)) intravenously (IV) (group M; n = 20) and left to breath room air or anaesthetized with propofol (6.5 +/- 0.76 mg kg(-1) IV) and sevoflurane (4.5% vaporizer setting) in oxygen (group P + S; n = 20) or with medetomidine (0.04 mg kg(-1) IV), propofol (1.92 +/- 0.63 mg kg(-1)) and sevoflurane (3% vaporizer setting) in oxygen (group M + P + S; n = 26), respectively. After 35 minutes, medetomidine was antagonized with atipamezole (0.1 mg kg(-1) intramuscularly). Blood samples for serum cTnI determination were taken before sedation or anaesthesia, 6 and 12 hours and 4 days thereafter. Serum cTnI concentrations were measured with the Architect STAT Troponin-I assay. Results Before sedation or anaesthesia, cTnI concentrations were above the detection limit in 22 out of 66 (33%) of dogs. Compared to basal values, cTnI concentrations significantly increased at 6 and 12 hours in all groups and at day 4 in group M. There were no differences in cTnI concentration between groups at baseline, at 6 hours and at 4 days. At 12 hours, cTnI concentrations were significantly higher in groups M and P + S, respectively, compared to group M + P + S. Conclusions and clinical relevance Oxygenation during anaesthesia and reduction of propofol and sevoflurane dose due to the sparing effects of medetomidine might have played a role in alleviation of myocardial hypoxic injury as indicated by the less severe and short-lived increase of cTnI in the M + P + S group.This is the peer-reviewed version of the article: Vasiljević, M.; Krstić, V.; Stanković, S.; Zrimsek, P.; Svete, A. N.; Seliskar, A. Cardiac Troponin I in Dogs Anaesthetized with Propofol and Sevoflurane: The Influence of Medetomidine Premedication and Inspired Oxygen Fraction. Veterinary Anaesthesia and Analgesia 2018, 45 (6), 745–753. [https://doi.org/10.1016/j.vaa.2018.07.003

Herbivore regulation of plant abundance in aquatic ecosystems.

Herbivory is a fundamental process that controls primary producer abundance and regulates energy and nutrient flows to higher trophic levels. Despite the recent proliferation of small-scale studies on herbivore effects on aquatic plants, there remains limited understanding of the factors that control consumer regulation of vascular plants in aquatic ecosystems. Our current knowledge of the regulation of primary producers has hindered efforts to understand the structure and functioning of aquatic ecosystems, and to manage such ecosystems effectively. We conducted a global meta-analysis of the outcomes of plant-herbivore interactions using a data set comprised of 326 values from 163 studies, in order to test two mechanistic hypotheses: first, that greater negative changes in plant abundance would be associated with higher herbivore biomass densities; second, that the magnitude of changes in plant abundance would vary with herbivore taxonomic identity. We found evidence that plant abundance declined with increased herbivore density, with plants eliminated at high densities. Significant between-taxa differences in impact were detected, with insects associated with smaller reductions in plant abundance than all other taxa. Similarly, birds caused smaller reductions in plant abundance than echinoderms, fish, or molluscs. Furthermore, larger reductions in plant abundance were detected for fish relative to crustaceans. We found a positive relationship between herbivore species richness and change in plant abundance, with the strongest reductions in plant abundance reported for low herbivore species richness, suggesting that greater herbivore diversity may protect against large reductions in plant abundance. Finally, we found that herbivore-plant nativeness was a key factor affecting the magnitude of herbivore impacts on plant abundance across a wide range of species assemblages. Assemblages comprised of invasive herbivores and native plant assemblages were associated with greater reductions in plant abundance compared with invasive herbivores and invasive plants, native herbivores and invasive plants, native herbivores and mixed-nativeness plants, and native herbivores and native plants. By contrast, assemblages comprised of native herbivores and invasive plants were associated with lower reductions in plant abundance compared with both mixed-nativeness herbivores and native plants, and native herbivores and native plants. However, the effects of herbivore-plant nativeness on changes in plant abundance were reduced at high herbivore densities. Our mean reductions in aquatic plant abundance are greater than those reported in the literature for terrestrial plants, but lower than aquatic algae. Our findings highlight the need for a substantial shift in how biologists incorporate plant-herbivore interactions into theories of aquatic ecosystem structure and functioning. Currently, the failure to incorporate top-down effects continues to hinder our capacity to understand and manage the ecological dynamics of habitats that contain aquatic plants

PII: S 0 0 4 0 -6 0 9 0 Ž 0 3 . 0 0 0 2 9 -4 In situ measurements of sensor film dynamics by spectroscopic ellipsometry. Demonstration of back-side measurements and the etching of indium tin oxide

Abstract A new liquid flow cell design for in situ ellipsometric measurements on transparent multilayer samples using variable angle spectroscopic ellipsometry is presented. In this cell, films made on transparent substrates are in direct contact with liquid solution. Ellipsometry measurements are made through the transparent substrate, that is, from the back-side relative to the incident light so that films are in continuous contact with the liquid. This cell is not limited to just one angle of incidence of light allowing the films to be characterized at several angles before, during and after liquid contact. The spectral range of measurements is limited only by absorption of light in the underlying transparent substrate and not by the liquid solution that the film is in contact with. As a demonstration, we have measured and analyzed the dynamics of an indium tin oxide film on glass undergoing acid etching. Data from this in situ experiment were successfully modeled and the ITO layer thickness decreased uniformly during the etching process with an average etch rate of 0.23 nmymin

Design and Development of a New Hybrid Spectroelectrochemical Sensor

The general aim of this project is to design and implement a new sensor technology which offers the unprecedented levels of specificity needed for analysis of the complex chemical mixtures found at USDOE sites nationwide. The new sensor concept proposed combines the elements of electrochemistry, spectroscopy and selective partitioning into a single device that provides three levels of selectivity. This type of sensor has many potential applications at DOE sites. As an example, the enhanced specificity embodied in this new sensor design is well-suited to the analytical problem posed by the addition of ferrocyanide to radioactive tank wastes at the USDOE Hanford Site

Spectroelectrochemical Sensor for Pertechnetate Applicable to Hanford and Other DOE Sites

The general aim of our work funded by DOE is the design and implementation of a new sensor technology that offers the unprecedented levels of specificity needed for analysis of the complex chemical mixtures found at DOE sites nationwide. The sensor is based on a unique combination of electrochemistry, spectroscopy and selective partitioning into a film that collectively provide an extraordinary level of selectivity for the target analyte. Our goal is a reversible sensor in which the fluorescent Tc-complex formed in the film is re-oxidized to TcO4 ? and free ligand. TcO4 ? in the film would then re-equilibrate with the sample. The sensor would therefore satisfy requirements for both applications described above. Making significant progress towards this goal has required us to discover new chemistry and spectroscopy for technetium itself. Indeed, we needed to find the first technetium complexes which fluoresced in solution at room temperature ? we have made that breakthrough discovery this last year. We are now in the unique position of being able to reach our goal of a reversible sensor for Tc

Molecular characterization of the endoplasmic reticulum: Insights from proteomic studies

The endoplasmic reticulum (ER) is a multifunctional intracellular organelle responsible for the synthesis, processing and trafficking of a wide variety of proteins essential for cell growth and survival. Therefore, comprehensive characterization of the ER proteome is of great importance to the understanding of its functions and has been actively pursued in the past decade by scientists in the proteomics field. This review summarizes major proteomic studies published in the past decade that focused on the ER proteome. We evaluate the data sets obtained from two different organs, liver and pancreas each of which contains a primary cell type (hepatocyte and acinar cell) with specialized functions. We also discuss how the nature of the proteins uncovered is related to the methods of organelle purification, organelle purity and the techniques used for protein separation prior to MS. In addition, this review also puts emphasis on the biological insights gained from these studies regarding the molecular functions of the ER including protein synthesis and translocation, protein folding and quality control, ER-associated degradation and ER stress, ER export and membrane trafficking, calcium homeostasis and detoxification and drug metabolism.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/78298/1/4040_ftp.pd