IVOA Recommendation: IVOA Support Interfaces

This document describes the minimum interface that a (SOAP- or REST-based) web service requires to participate in the IVOA. Note that this is not required of standard VO services developed prior to this specification, although uptake is strongly encouraged on any subsequent revision. All new standard VO services, however, must feature a VOSI-compliant interface. This document has been produced by the Grid and Web Services Working Group. It has been reviewed by IVOA Members and other interested parties, and has been endorsed by the IVOA Executive Committee as an IVOA Recommendation. It is a stable document and may be used as reference material or cited as a normative reference from another document. IVOA's role in making the Recommendation is to draw attention to the specification and to promote its widespread deployment. This enhances the functionality and interoperability inside the Astronomical Community

Potentially Polluting Marine Sites GeoDB: An S-100 Geospatial Database as an Effective Contribution to the Protection of the Marine Environment

Potentially Polluting Marine Sites (PPMS) are objects on, or areas of, the seabed that may release pollution in the future. A rationale for, and design of, a geospatial database to inventory and manipu-late PPMS is presented. Built as an S-100 Product Specification, it is specified through human-readable UML diagrams and implemented through machine-readable GML files, and includes auxiliary information such as pollution-control resources and potentially vulnerable sites in order to support analyses of the core data. The design and some aspects of implementation are presented, along with metadata requirements and structure, and a perspective on potential uses of the database

Submission of content to a digital object repository using a configurable workflow system

The prototype of a workflow system for the submission of content to a digital object repository is here presented. It is based entirely on open-source standard components and features a service-oriented architecture. The front-end consists of Java Business Process Management (jBPM), Java Server Faces (JSF), and Java Server Pages (JSP). A Fedora Repository and a mySQL data base management system serve as a back-end. The communication between front-end and back-end uses a SOAP minimal binding stub. We describe the design principles and the construction of the prototype and discuss the possibilities and limitations of work ow creation by administrators. The code of the prototype is open-source and can be retrieved in the project escipub at http://sourceforge.ne

Access Interfaces for Open Archival Information Systems based on the OAI-PMH and the OpenURL Framework for Context-Sensitive Services

In recent years, a variety of digital repository and archival systems have been developed and adopted. All of these systems aim at hosting a variety of compound digital assets and at providing tools for storing, managing and accessing those assets. This paper will focus on the definition of common and standardized access interfaces that could be deployed across such diverse digital respository and archival systems. The proposed interfaces are based on the two formal specifications that have recently emerged from the Digital Library community: The Open Archive Initiative Protocol for Metadata Harvesting (OAI-PMH) and the NISO OpenURL Framework for Context-Sensitive Services (OpenURL Standard). As will be described, the former allows for the retrieval of batches of XML-based representations of digital assets, while the latter facilitates the retrieval of disseminations of a specific digital asset or of one or more of its constituents. The core properties of the proposed interfaces are explained in terms of the Reference Model for an Open Archival Information System (OAIS).Comment: Accepted paper for PV 2005 "Ensuring Long-term Preservation and Adding Value to Scientific and Technical data" (http://www.ukoln.ac.uk/events/pv-2005/

XSIL: Extensible Scientific Interchange Language

We motivate and define the XSIL language as a flexible, hierarchical, extensible transport language for scientific data objects. The entire object may be represented in the file, or there may be metadata in the XSIL file, with a powerful, fault-tolerant linking mechanism to external data. The language is based on XML, and is designed not only for parsing and processing by machines, but also for presentation to humans through web browsers and web-database technology. There is a natural mapping between the elements of the XSIL language and the object model into which they are translated by the parser. As well as common objects (Parameter, Array, Time, Table), we have extended XSIL to include the IGWDFrame, used by gravitational-wave observatories

Projector - a partially typed language for querying XML

We describe Projector, a language that can be used to perform a mixture of typed and untyped computation against data represented in XML. For some problems, notably when the data is unstructured or semistructured, the most desirable programming model is against the tree structure underlying the document. When this tree structure has been used to model regular data structures, then these regular structures themselves are a more desirable programming model. The language Projector, described here in outline, gives both models within a single partially typed algebra and is well suited for hybrid applications, for example when fragments of a known structure are embedded in a document whose overall structure is unknown. Projector is an extension of ECMA-262 (aka JavaScript), and therefore inherits an untyped DOM interface. To this has been added some static typing and a dynamic projection primitive, which can be used to assert the presence of a regular structure modelled within the XML. If this structure does exist, the data is extracted and presented as a typed value within the programming language

Annotations for Rule-Based Models

The chapter reviews the syntax to store machine-readable annotations and describes the mapping between rule-based modelling entities (e.g., agents and rules) and these annotations. In particular, we review an annotation framework and the associated guidelines for annotating rule-based models of molecular interactions, encoded in the commonly used Kappa and BioNetGen languages, and present prototypes that can be used to extract and query the annotations. An ontology is used to annotate models and facilitate their description

Contextualized B2B Registries

Abstract. Service discovery is a fundamental concept underpinning the move towards dynamic service-oriented business partnerships. The business process for integrating service discovery and underlying registry technologies into business relationships, procurement and project management functions has not been examined and hence existing Web Service registries lack capabilities required by business today. In this paper we present a novel contextualized B2B registry that supports dynamic registration and discovery of resources within management contexts to ensure that the search space is constrained to the scope of authorized and legitimate resources only. We describe how the registry has been deployed in three case studies from important economic sectors (aerospace, automotive, pharmaceutical) showing how contextualized discovery can support distributed product development processes