112 research outputs found

    Feature selection for an SVM based webpage classifier

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    Distributed Big-Data Optimization via Block Communications

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    We study distributed multi-agent large-scale optimization problems, wherein the cost function is composed of a smooth possibly nonconvex sum-utility plus a DC (Difference-of-Convex) regularizer. We consider the scenario where the dimension of the optimization variables is so large that optimizing and/or transmitting the entire set of variables could cause unaffordable computation and communication overhead. To address this issue, we propose the first distributed algorithm whereby agents optimize and communicate only a portion of their local variables. The scheme hinges on successive convex approximation (SCA) to handle the nonconvexity of the objective function, coupled with a novel block-signal tracking scheme, aiming at locally estimating the average of the agents' gradients. Asymptotic convergence to stationary solutions of the nonconvex problem is established. Numerical results on a sparse regression problem show the effectiveness of the proposed algorithm and the impact of the block size on its practical convergence speed and communication cost

    Digging into acceptor splice site prediction : an iterative feature selection approach

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    Feature selection techniques are often used to reduce data dimensionality, increase classification performance, and gain insight into the processes that generated the data. In this paper, we describe an iterative procedure of feature selection and feature construction steps, improving the classification of acceptor splice sites, an important subtask of gene prediction. We show that acceptor prediction can benefit from feature selection, and describe how feature selection techniques can be used to gain new insights in the classification of acceptor sites. This is illustrated by the identification of a new, biologically motivated feature: the AG-scanning feature. The results described in this paper contribute both to the domain of gene prediction, and to research in feature selection techniques, describing a new wrapper based feature weighting method that aids in knowledge discovery when dealing with complex datasets

    Large-scale Nonlinear Variable Selection via Kernel Random Features

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    We propose a new method for input variable selection in nonlinear regression. The method is embedded into a kernel regression machine that can model general nonlinear functions, not being a priori limited to additive models. This is the first kernel-based variable selection method applicable to large datasets. It sidesteps the typical poor scaling properties of kernel methods by mapping the inputs into a relatively low-dimensional space of random features. The algorithm discovers the variables relevant for the regression task together with learning the prediction model through learning the appropriate nonlinear random feature maps. We demonstrate the outstanding performance of our method on a set of large-scale synthetic and real datasets.Comment: Final version for proceedings of ECML/PKDD 201
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