Technical note : TRACKFlow, a new versatile microscope system forfission track analysis

We here present TRACKFlow, a new system with dedicated modules for the fission track (FT) laboratory. It is based on the motorised Nikon Eclipse Ni-E upright microscope with the Nikon DS-Ri2 full frame camera and is embedded within the Nikon NIS-Elements Advanced Research software package. TRACKFlow decouples image acquisition from analysis to decrease schedule stress of the microscope. The system further has the aim of being versatile, adaptable to multiple preparation protocols and analysis approaches. It is both suited for small-scale laboratories and is also ready for upscaling to high-throughput imaging. The versatility of the system, based on the operators’ full access to the NIS-Elements package, exceeds that of other systems for FT and further expands to stepping away from the dedicated FT microscope towards a general microscope for Earth Sciences, including dedicated modules for FT research. TRACKFlow consists of a number of user-friendly protocols which are based on the well plate design that allows sequential scanning of multiple samples without the need of replacing the slide on the stage. All protocols include a sub-protocol to scan a map of the mount for easy navigation through the samples on the stage. Two protocols are designed for the External Detector Method (EDM) and the LA–ICP–MS apatite fission track (LAFT) approach, with tools for repositioning and calibration to the external detector. Two other tools are designed for large crystals, such as the Durango age standard and U-doped glass external detectors. These protocols generate a regular grid of points and inspect if each point is suitable for analysis. Both protocols also include an option to image each withheld point. One more protocol is included for the measurement of etch pit diameters and one last protocol prepares a list of coordinates for correlative microscopy. In a following phase of development TRACKFlow can be expanded towards fully autonomous calibration, grain detection and imaging

Coseismic surface deformation from air photos: The Kickapoo step over in the 1992 Landers rupture

Coseismic deformation of the ground can be measured from aerial views taken before and after an earthquake. We chose the area of the Kickapoo-Landers step over along the 1992 Landers earthquake zone, using air photos (scale 1:40,000) scanned at 0.4 m resolution. Two photos acquired after the earthquake are used to assess the accuracy and to evaluate various sources of noise. Optical distortions, film deformation, scanning errors, or errors in viewing parameters can yield metric bias at wavelength larger than 1 km. Offset field at shorter wavelength is more reliable and mainly affected by temporal decorrelation of the images induced by changes in radiometry with time. Temporal decorrelation and resulting uncertainty on offsets are estimated locally from the correlation degree between the images. Relative surface displacements are measured independently every about 15 m and with uncertainty typically below 10 cm (RMS). The offset field reveals most of the surface ruptures mapped in the field. The fault slip is accurate to about 7 cm (RMS) and measured independently every 200 m from stacked profiles. Slip distribution compares well with field measurements at the kilometric scale but reveals local discrepancies suggesting that deformation is generally, although not systematically, localized on the major fault zone located in the field. This type of data can provide useful insight into the fault zone's mechanical properties. Our measurements indicate that elastic coseismic strain near the fault zone can be as large as 0.5 × 10^(−3), while anelastic yielding was attained for strain in excess of about 1–2 × 10^(−3)

Scanamorphos: a map-making software for Herschel and similar scanning bolometer arrays

Scanamorphos is one of the public softwares available to post-process scan observations performed with the Herschel photometer arrays. This post-processing mainly consists in subtracting the total low-frequency noise (both its thermal and non-thermal components), masking high-frequency artefacts such as cosmic ray hits, and projecting the data onto a map. Although it was developed for Herschel, it is also applicable with minimal adjustment to scan observations made with some other imaging arrays subjected to low-frequency noise, provided they entail sufficient redundancy; it was successfully applied to P-Artemis, an instrument operating on the APEX telescope. Contrary to matrix-inversion softwares and high-pass filters, Scanamorphos does not assume any particular noise model, and does not apply any Fourier-space filtering to the data, but is an empirical tool using purely the redundancy built in the observations -- taking advantage of the fact that each portion of the sky is sampled at multiple times by multiple bolometers. It is an interactive software in the sense that the user is allowed to optionally visualize and control results at each intermediate step, but the processing is fully automated. This paper describes the principles and algorithm of Scanamorphos and presents several examples of application.Comment: This is the final version as accepted by PASP (on July 27, 2013). A copy with much better-quality figures is available on http://www2.iap.fr/users/roussel/herschel

Guidance for benthic habitat mapping: an aerial photographic approach

This document, Guidance for Benthic Habitat Mapping: An Aerial Photographic Approach, describes proven technology that can be applied in an operational manner by state-level scientists and resource managers. This information is based on the experience gained by NOAA Coastal Services Center staff and state-level cooperators in the production of a series of benthic habitat data sets in Delaware, Florida, Maine, Massachusetts, New York, Rhode Island, the Virgin Islands, and Washington, as well as during Center-sponsored workshops on coral remote sensing and seagrass and aquatic habitat assessment. (PDF contains 39 pages) The original benthic habitat document, NOAA Coastal Change Analysis Program (C-CAP): Guidance for Regional Implementation (Dobson et al.), was published by the Department of Commerce in 1995. That document summarized procedures that were to be used by scientists throughout the United States to develop consistent and reliable coastal land cover and benthic habitat information. Advances in technology and new methodologies for generating these data created the need for this updated report, which builds upon the foundation of its predecessor

HeadOn: Real-time Reenactment of Human Portrait Videos

We propose HeadOn, the first real-time source-to-target reenactment approach for complete human portrait videos that enables transfer of torso and head motion, face expression, and eye gaze. Given a short RGB-D video of the target actor, we automatically construct a personalized geometry proxy that embeds a parametric head, eye, and kinematic torso model. A novel real-time reenactment algorithm employs this proxy to photo-realistically map the captured motion from the source actor to the target actor. On top of the coarse geometric proxy, we propose a video-based rendering technique that composites the modified target portrait video via view- and pose-dependent texturing, and creates photo-realistic imagery of the target actor under novel torso and head poses, facial expressions, and gaze directions. To this end, we propose a robust tracking of the face and torso of the source actor. We extensively evaluate our approach and show significant improvements in enabling much greater flexibility in creating realistic reenacted output videos.Comment: Video: https://www.youtube.com/watch?v=7Dg49wv2c_g Presented at Siggraph'1

Image-based 3D capture of cultural heritage artifacts an experimental study about 3D data quality

The paper presents an analysis of the 3D data quality generated from small-medium objects by well-known automatic photogrammetry packages based on Structure from Motion (SfM) and Image Matching (IM). The work aims at comparing different shooting configurations and image redundancy, using as high-quality reference the 3D data acquired by triangulation-based laser scanners characterized by a low measurement uncertainty. Two set of tests are presented: i) a laboratory 3D measurement made with the two active and passive approaches, where the image-based 3D acquisition makes use of different camera orientations leading to different image redundancy; ii) a 3D digitization in the field with an industrial laser scanner and two sets of images taken with different overlap levels. The results in the field confirm the relationship between measurement uncertainty and image overlap that emerged in the Lab tests

Probabilistic Surfel Fusion for Dense LiDAR Mapping

With the recent development of high-end LiDARs, more and more systems are able to continuously map the environment while moving and producing spatially redundant information. However, none of the previous approaches were able to effectively exploit this redundancy in a dense LiDAR mapping problem. In this paper, we present a new approach for dense LiDAR mapping using probabilistic surfel fusion. The proposed system is capable of reconstructing a high-quality dense surface element (surfel) map from spatially redundant multiple views. This is achieved by a proposed probabilistic surfel fusion along with a geometry considered data association. The proposed surfel data association method considers surface resolution as well as high measurement uncertainty along its beam direction which enables the mapping system to be able to control surface resolution without introducing spatial digitization. The proposed fusion method successfully suppresses the map noise level by considering measurement noise caused by laser beam incident angle and depth distance in a Bayesian filtering framework. Experimental results with simulated and real data for the dense surfel mapping prove the ability of the proposed method to accurately find the canonical form of the environment without further post-processing.Comment: Accepted in Multiview Relationships in 3D Data 2017 (IEEE International Conference on Computer Vision Workshops

Historical map digitization in libraries: Collaborative approaches for large map series

Academic libraries are playing a role in the digitization of Canadian government documents, but maps tend to be excluded from these activities due to their unique dimensions and display requirements. Using a topographic map digitization project as a case study, this paper presents a collaborative approach to map scanning, georeferencing, and metadata creation across several Ontario universities. Collectively, the 21 institutions making up the Ontario Council of University Libraries (OCUL) possess and maintain large volumes of Canadian topographic maps. However, few OCUL universities hold complete sets of these map series. While the Canadian government’s most recent topographic maps are now available online, older editions of these maps have not been digitized. This project, currently underway at several participating universities, will enable us to share digital versions of some of our most-requested historical map series with the public at large

State of the art in digitization of historical maps and analysis of their metric content

The present work discuss the digitization and georeferencing of the cartographic heritage preserved in the public archives, with special attention to image quality, support deformation analysis and metric content verification. The use of the photogrammetric techniques is suggested, with some applications to the Sabaudian cadastre