Mapping tropical forest aboveground biomass using airborne SAR tomography

Ramachandran, N.; Department of Civil Engineering, India; email: [email protected] Researc

Channel Sounding for the Masses: Low Complexity GNU 802.11b Channel Impulse Response Estimation

New techniques in cross-layer wireless networks are building demand for ubiquitous channel sounding, that is, the capability to measure channel impulse response (CIR) with any standard wireless network and node. Towards that goal, we present a software-defined IEEE 802.11b receiver and CIR estimation system with little additional computational complexity compared to 802.11b reception alone. The system implementation, using the universal software radio peripheral (USRP) and GNU Radio, is described and compared to previous work. By overcoming computational limitations and performing direct-sequence spread-spectrum (DS-SS) matched filtering on the USRP, we enable high-quality yet inexpensive CIR estimation. We validate the channel sounder and present a drive test campaign which measures hundreds of channels between WiFi access points and an in-vehicle receiver in urban and suburban areas

Doctor of Philosophy

dissertationThe wireless radio channel is typically thought of as a means to move information from transmitter to receiver, but the radio channel can also be used to detect changes in the environment of the radio link. This dissertation is focused on the measurements we can make at the physical layer of wireless networks, and how we can use those measurements to obtain information about the locations of transceivers and people. The first contribution of this work is the development and testing of an open source, 802.11b sounder and receiver, which is capable of decoding packets and using them to estimate the channel impulse response (CIR) of a radio link at a fraction of the cost of traditional channel sounders. This receiver improves on previous implementations by performing optimized matched filtering on the field-programmable gate array (FPGA) of the Universal Software Radio Peripheral (USRP), allowing it to operate at full bandwidth. The second contribution of this work is an extensive experimental evaluation of a technology called location distinction, i.e., the ability to identify changes in radio transceiver position, via CIR measurements. Previous location distinction work has focused on single-input single-output (SISO) radio links. We extend this work to the context of multiple-input multiple-output (MIMO) radio links, and study system design trade-offs which affect the performance of MIMO location distinction. The third contribution of this work introduces the "exploiting radio windows" (ERW) attack, in which an attacker outside of a building surreptitiously uses the transmissions of an otherwise secure wireless network inside of the building to infer location information about people inside the building. This is possible because of the relative transparency of external walls to radio transmissions. The final contribution of this dissertation is a feasibility study for building a rapidly deployable radio tomographic (RTI) imaging system for special operations forces (SOF). We show that it is possible to obtain valuable tracking information using as few as 10 radios over a single floor of a typical suburban home, even without precise radio location measurements

CALIBRATION OF AN ULTRASONIC TRANSMISSIVE COMPUTED TOMOGRAPHY SYSTEM

Tato dizertace je zaměřena na medicínskou zobrazovací modalitu – ultrazvukovou počítačovou tomografii – a algoritmy zlepšující kvalitu zobrazení, zejména kalibraci USCT přístroje. USCT je novou modalitou kombinující ultrazvukový přenos signálů a principy tomografické rekonstrukce obrazů vyvíjených pro jiné tomografické systémy. V principu lze vytvořit kvantitativní 3D obrazové objemy s vysokým rozlišením a kontrastem. USCT je primárně určeno pro diagnózu rakoviny prsu. Autor spolupracoval na projektu Institutu Zpracování dat a Elektroniky, Forschungszentrum Karlsruhe, kde je USCT systém vyvíjen. Jeden ze zásadních problémů prototypu USCT v Karlsruhe byla absence kalibrace. Tisíce ultrazvukových měničů se liší v citlivosti, směrovosti a frekvenční odezvě. Tyto parametry jsou navíc proměnné v čase. Další a mnohem závažnější problém byl v pozičních odchylkách jednotlivých měničů. Všechny tyto aspekty mají vliv na konečnou kvalitu rekonstruovaných obrazů. Problém kalibrace si autor zvolil jako hlavní téma dizertace. Tato dizertace popisuje nové metody v oblastech rekonstrukce útlumových obrazů, kalibrace citlivosti měničů a zejména geometrická kalibrace pozic měničů. Tyto metody byly implementovány a otestovány na reálných datech pocházejících z prototypu USCT z Karlsruhe.This dissertation is centered on a medical imaging modality – the ultrasonic computed tomography (USCT) – and algorithms which improve the resulting image quality, namely the calibration of a USCT device. The USCT is a novel imaging modality which combines the phenomenon of ultrasound and image reconstruction principles developed for other tomographic systems. It is capable of producing quantitative 3D image volumes with high resolution and tissue contrast and is primarily aimed at breast cancer diagnosis. The author was involved in a joint research project at the Institute of Data Processing and Electronics, Forschungszentrum Karlsruhe (German National Research Center), where a USCT system is being developed. One of the main problems in the Karlsruhe USCT prototype was the absence of any calibration. The thousands of transducers used in the system have deviations in sensitivity, directivity, and frequency response. These parameters change over time as the transducers age. Also the mechanical positioning of the transducer elements is not precise. All these aspects greatly affect the overall quality of the reconstructed images. The problem of calibration of a USCT system was chosen as the main topic for this dissertation. The dissertation thesis presents novel methods in the area of reconstruction of attenuation images, sensitivity calibration, and mainly geometrical calibration. The methods were implemented and tested on real data generated by the Karlsruhe USCT device.

Identifying Material Parameters for a Micro-Polar Plasticity Model Via X-Ray Micro-Computed Tomographic (Ct) Images: Lessons Learned from the Curve-Fitting Exercises

Abstract: Unlike a conventional first-order continuum model, the material parameters of which can be identified via an inverse problem conducted at material point that exhibits homogeneous deformation, a higher-order continuum model requires information from the derivative of the deformation gradient. This study concerns an integrated experimental-numerical procedure designed to identify material parameters for higher-order continuum models. Using a combination of microCT images and macroscopic stress–strain curves as the database, we construct a new finite element inverse problem which identifies the optimal value of material parameters that matches both the macroscopic constitutive responses and the meso-scale micropolar kinematics. Our results indicate that the optimal characteristic length predicted by the constrained optimization procedure is highly sensitive to the types and weights of constraints used to define the objective function of the inverse problems. This sensitivity may in return affect the resultant failure modes (localized vs. diffuse), and the coupled stress responses. This result signals that using the mean grain diameter alone to calibrate the characteristic length may not be sufficient to yield reliable forward predictions. Key words: micro-CT imaging, micro-polar plasticity, critical state, higher-order continuum, Hostun San

Development of 3D super-resolution tomographic STED microscopy and its application to studies on bone resorption

In this doctoral thesis, a tomographic STED microscopy technique for 3D super-resolution imaging was developed and utilized to observebone remodeling processes. To improve upon existing methods, wehave used a tomographic approach using a commercially available stimulated emission depletion (STED) microscope. A certain region of interest (ROI) was observed at two oblique angles: one at a standard inverted configuration from below (bottom view) and another from the side (side view) via a micro-mirror positioned close to the ROI. The two viewing angles were reconstructed into a final tomogram. The technique, named as tomographic STED microscopy, was able to achieve an axial resolution of approximately 70 nm on microtubule structures in a fixed biological specimen. High resolution imaging of osteoclasts (OCs) that are actively resorbing bone was achieved by creating an optically transparent coating on a microscope coverglass that imitates a fractured bone surface. 2D super-resolution STED microscopy on the bone layer showed approximately 60 nm of lateral resolution on a resorption associated organelle allowing these structures to be imaged with super-resolution microscopy for the first time. The developed tomographic STED microscopy technique was further applied to study resorption mechanisms of OCs cultured on the bone coating. The technique revealed actin cytoskeleton with specific structures, comet-tails, some of which were facing upwards and some others were facing downwards. This, in our opinion, indicated that during bone resorption, an involvement of the actin cytoskeleton in vesicular exocytosis and endocytosis is present. The application of tomographic STED microscopy in bone biology demonstrated that 3D super-resolution techniques can provide new insights into biological 3D nano-structures that are beyond the diffraction-limit when the optical constraints of super-resolution imaging are carefully taken into account.Tomografisen STED superresoluutio mikroskooppitekniikan kehittäminen, sekä sen sovellus luubiologian tutkimuksessa Väitöskirja käsittelee STED super-resoluutio kerroskuvausmikroskooppitekniikan kehittämistä, sekä sen sovellusta luuston uusiutumisprosessin havainnoinnissa. Tekniikka kehitettiin kaupallista STED mikroskooppia hyödyntäen. Kerroskuvausmenetelmä perustuu näytteen kuvaamiseen kahdesta eri suunnasta, alta sekä sivusta; sivunäkymä muodostettiin mikroskooppinäytteen päälle, kuvattavan kohteen yläpuolelle vinosti asetetun pienen peilin kautta, jonka jälkeen projektiot yhdistetään laskennallisesti yhdeksi kerroskuvaksi. STED kerroskuvaustekniikka mahdollisti solun sisäisten mikroputkirakenteiden havainnoinnin 70nm pitkittäisresoluutiolla. Pystyäksemme kuvaamaan luuta aktiivisesti resorpoivia osteoklastisoluja korkealla optisella erottelukyvyllä, kehitimme mikroskooppilasille muodostettavan, optisesti läpinäkyvän pinnoitteen, joka imitoi murtunutta luupintaa. Pinnoite mahdollisti osteoklastisolujen luun resorptioon liittyvien soluelinten kuvantamisen 2D STED mikroskooppia käyttäen 60 nm lateraaliresoluutiolla; tämä on ensimmäinen kerta kun kyseisiä solurakenteita on pystytty kuvaamaan super-resoluutio mikroskoopilla. Käytimme kehitettyä tomografista STED tekniikkaa osteoklastisolujen resorptiomekanismin kuvantamisessa, uutta läpinäkyvää luupinnoitetta hyväksikäyttäen. Tomografiatekniikalla muodostetuista kuvista voidaan nähdä aktiini tukirakenteiden spesifisiä rakenteita, jotka meidän mielestämme viittaavat niiden osallistumiseen vesikkeleiden endo- ja eksosytoosiin luun resorptioprosessin aikana. Tomografinen STED mikroskopia, yhdistettynä uuteen luupinnoitteeseen avaa uusia mahdollisuuksia kolmiulotteisten nanorakenteiden havainnointiin, tutkittaessa luuston uusiutumisprosessia.Siirretty Doriast

The BIOMASS level 2 prototype processor : design and experimental results of above-ground biomass estimation

BIOMASS is ESA’s seventh Earth Explorer mission, scheduled for launch in 2022. The satellite will be the first P-band SAR sensor in space and will be operated in fully polarimetric interferometric and tomographic modes. The mission aim is to map forest above-ground biomass (AGB), forest height (FH) and severe forest disturbance (FD) globally with a particular focus on tropical forests. This paper presents the algorithms developed to estimate these biophysical parameters from the BIOMASS level 1 SAR measurements and their implementation in the BIOMASS level 2 prototype processor with a focus on the AGB product. The AGB product retrieval uses a physically-based inversion model, using ground-canceled level 1 data as input. The FH product retrieval applies a classical PolInSAR inversion, based on the Random Volume over Ground Model (RVOG). The FD product will provide an indication of where significant changes occurred within the forest, based on the statistical properties of SAR data. We test the AGB retrieval using modified airborne P-Band data from the AfriSAR and TropiSAR campaigns together with reference data from LiDAR-based AGB maps and plot-based ground measurements. For AGB estimation based on data from a single heading, comparison with reference data yields relative Root Mean Square Difference (RMSD) values mostly between 20% and 30%. Combining different headings in the estimation process significantly improves the AGB retrieval to slightly less than 20%. The experimental results indicate that the implemented retrieval scheme provides robust results that are within mission requirements

Doctor of Philosophy

dissertationLow-cost wireless embedded systems can make radio channel measurements for the purposes of radio localization, synchronization, and breathing monitoring. Most of those systems measure the radio channel via the received signal strength indicator (RSSI), which is widely available on inexpensive radio transceivers. However, the use of standard RSSI imposes multiple limitations on the accuracy and reliability of such systems; moreover, higher accuracy is only accessible with very high-cost systems, both in bandwidth and device costs. On the other hand, wireless devices also rely on synchronized notion of time to coordinate tasks (transmit, receive, sleep, etc.), especially in time-based localization systems. Existing solutions use multiple message exchanges to estimate time offset and clock skew, which further increases channel utilization. In this dissertation, the design of the systems that use RSSI for device-free localization, device-based localization, and breathing monitoring applications are evaluated. Next, the design and evaluation of novel wireless embedded systems are introduced to enable more fine-grained radio signal measurements to the application. I design and study the effect of increasing the resolution of RSSI beyond the typical 1 dB step size, which is the current standard, with a couple of example applications: breathing monitoring and gesture recognition. Lastly, the Stitch architecture is then proposed to allow the frequency and time synchronization of multiple nodes' clocks. The prototype platform, Chronos, implements radio frequency synchronization (RFS), which accesses complex baseband samples from a low-power low-cost narrowband radio, estimates the carrier frequency offset, and iteratively drives the difference between two nodes' main local oscillators (LO) to less than 3 parts per billion (ppb). An optimized time synchronization and ranging protocols (EffToF) is designed and implemented to achieve the same timing accuracy as the state-of-the-art but with 59% less utilization of the UWB channel. Based on this dissertation, I could foresee Stitch and RFS further improving the robustness of communications infrastructure to GPS jamming, allow exploration of applications such as distributed beamforming and MIMO, and enable new highly-synchronous wireless sensing and actuation systems