A Flexible Methodology to Sectorize Water Supply Networks Based on Social Network Theory Concepts and on Multi-objective Optimization

A novel methodology to sectorize water supply networks (WSNs) depending on a main transmission line is presented in this paper. The methodology is based on concepts derived from the social network theory and graph theory (namely, community detection and shortest path respectively); and also on a multi-objective optimization process by means of agent swarm optimization (ASO). A series of energy, operative, and economic criteria are optimized in this process. The core idea is to form sectors over the distribution network based on communities found using a community detection algorithm (Walktrap). The methodology is flexible and enables the technical staff in water utilities to make decisions at different stages. It has been tested by generating four feasible solutions over a portion of a real WSN.Campbell-Gonzalez, E.; Izquierdo Sebastián, J.; Montalvo Arango, I.; Ilaya-Ayza, AE.; Pérez García, R.; Tavera, M. (2016). A Flexible Methodology to Sectorize Water Supply Networks Based on Social Network Theory Concepts and on Multi-objective Optimization. Journal of Hydroinformatics. 18(1):62-76. doi:10.2166/hydro.2015.146S627618

Safe and complete contig assembly via omnitigs

Contig assembly is the first stage that most assemblers solve when reconstructing a genome from a set of reads. Its output consists of contigs -- a set of strings that are promised to appear in any genome that could have generated the reads. From the introduction of contigs 20 years ago, assemblers have tried to obtain longer and longer contigs, but the following question was never solved: given a genome graph $G$ (e.g. a de Bruijn, or a string graph), what are all the strings that can be safely reported from $G$ as contigs? In this paper we finally answer this question, and also give a polynomial time algorithm to find them. Our experiments show that these strings, which we call omnitigs, are 66% to 82% longer on average than the popular unitigs, and 29% of dbSNP locations have more neighbors in omnitigs than in unitigs.Comment: Full version of the paper in the proceedings of RECOMB 201

Adaptive Probabilistic Flooding for Multipath Routing

In this work, we develop a distributed source routing algorithm for topology discovery suitable for ISP transport networks, that is however inspired by opportunistic algorithms used in ad hoc wireless networks. We propose a plug-and-play control plane, able to find multiple paths toward the same destination, and introduce a novel algorithm, called adaptive probabilistic flooding, to achieve this goal. By keeping a small amount of state in routers taking part in the discovery process, our technique significantly limits the amount of control messages exchanged with flooding -- and, at the same time, it only minimally affects the quality of the discovered multiple path with respect to the optimal solution. Simple analytical bounds, confirmed by results gathered with extensive simulation on four realistic topologies, show our approach to be of high practical interest.Comment: 6 pages, 6 figure

The Virtual Block Interface: A Flexible Alternative to the Conventional Virtual Memory Framework

Computers continue to diversify with respect to system designs, emerging memory technologies, and application memory demands. Unfortunately, continually adapting the conventional virtual memory framework to each possible system configuration is challenging, and often results in performance loss or requires non-trivial workarounds. To address these challenges, we propose a new virtual memory framework, the Virtual Block Interface (VBI). We design VBI based on the key idea that delegating memory management duties to hardware can reduce the overheads and software complexity associated with virtual memory. VBI introduces a set of variable-sized virtual blocks (VBs) to applications. Each VB is a contiguous region of the globally-visible VBI address space, and an application can allocate each semantically meaningful unit of information (e.g., a data structure) in a separate VB. VBI decouples access protection from memory allocation and address translation. While the OS controls which programs have access to which VBs, dedicated hardware in the memory controller manages the physical memory allocation and address translation of the VBs. This approach enables several architectural optimizations to (1) efficiently and flexibly cater to different and increasingly diverse system configurations, and (2) eliminate key inefficiencies of conventional virtual memory. We demonstrate the benefits of VBI with two important use cases: (1) reducing the overheads of address translation (for both native execution and virtual machine environments), as VBI reduces the number of translation requests and associated memory accesses; and (2) two heterogeneous main memory architectures, where VBI increases the effectiveness of managing fast memory regions. For both cases, VBI significanttly improves performance over conventional virtual memory

Spartan Daily, March 4, 1954

Volume 42, Issue 99https://scholarworks.sjsu.edu/spartandaily/11994/thumbnail.jp

Directed nonabelian sandpile models on trees

We define two general classes of nonabelian sandpile models on directed trees (or arborescences) as models of nonequilibrium statistical phenomena. These models have the property that sand grains can enter only through specified reservoirs, unlike the well-known abelian sandpile model. In the Trickle-down sandpile model, sand grains are allowed to move one at a time. For this model, we show that the stationary distribution is of product form. In the Landslide sandpile model, all the grains at a vertex topple at once, and here we prove formulas for all eigenvalues, their multiplicities, and the rate of convergence to stationarity. The proofs use wreath products and the representation theory of monoids.Comment: 43 pages, 5 figures; introduction improve

Deep Acrostics

Acronyms use the first letter of each word of a name. Diacronyms instead use the first two letters of names. While not yet called that, they featured in Short People in the November issue. Diacrostics are diacronyms of whole sentences. Unlike aconyms, which usually have to be defined and memorised, diacrostics may be -- and triacrostics often are -- directly readable, especially if the context is known, the language is simple, or the sentence is a familiar quotation