On control of singleton attractors in multiple Boolean networks: integer programming-based method

published_or_final_versionThe Twelfth Asia Pacific Bioinformatics Conference (APBC 2014), Shanghai, China. 17-19 January 2014. In BMC Systems Biology, 2014, v. 8, Suppl. 1, article no. S

An ESPC algorithm based approach to solve inventory deployment problem

Global competitiveness has enforced the hefty industries to become more customized. To compete in the market they are targeting the customers who want exotic products, and faster and reliable deliveries. Industries are exploring the option of satisfying a portion of their demand by converting strategically placed products, this helps in increasing the variability of product produced by them in short lead time. In this paper, authors have proposed a new hybrid evolutionary algorithm named Endosymbiotic-Psychoclonal (ESPC) algorithm to determine the amount and type of product to stock as a semi product in inventory. In the proposed work the ability of previously proposed Psychoclonal algorithm to exploit the search space has been increased by making antibodies and antigen more cooperative interacting species. The efficacy of the proposed algorithm has been tested on randomly generated datasets and the results obtained, are compared with other evolutionary algorithms such as Genetic Algorithm (GA) and Simulated Annealing (SA). The comparison of ESPC with GA and SA proves the superiority of the proposed algorithm both in terms of quality of the solution obtained, and convergence time required to reach the optimal /near optimal value of the solution

High-Level Object Oriented Genetic Programming in Logistic Warehouse Optimization

Disertační práce je zaměřena na optimalizaci průběhu pracovních operací v logistických skladech a distribučních centrech. Hlavním cílem je optimalizovat procesy plánování, rozvrhování a odbavování. Jelikož jde o problém patřící do třídy složitosti NP-težký, je výpočetně velmi náročné nalézt optimální řešení. Motivací pro řešení této práce je vyplnění pomyslné mezery mezi metodami zkoumanými na vědecké a akademické půdě a metodami používanými v produkčních komerčních prostředích. Jádro optimalizačního algoritmu je založeno na základě genetického programování řízeného bezkontextovou gramatikou. Hlavním přínosem této práce je a) navrhnout nový optimalizační algoritmus, který respektuje následující optimalizační podmínky: celkový čas zpracování, využití zdrojů, a zahlcení skladových uliček, které může nastat během zpracování úkolů, b) analyzovat historická data z provozu skladu a vyvinout sadu testovacích příkladů, které mohou sloužit jako referenční výsledky pro další výzkum, a dále c) pokusit se předčit stanovené referenční výsledky dosažené kvalifikovaným a trénovaným operačním manažerem jednoho z největších skladů ve střední Evropě.This work is focused on the work-flow optimization in logistic warehouses and distribution centers. The main aim is to optimize process planning, scheduling, and dispatching. The problem is quite accented in recent years. The problem is of NP hard class of problems and where is very computationally demanding to find an optimal solution. The main motivation for solving this problem is to fill the gap between the new optimization methods developed by researchers in academic world and the methods used in business world. The core of the optimization algorithm is built on the genetic programming driven by the context-free grammar. The main contribution of the thesis is a) to propose a new optimization algorithm which respects the makespan, the utilization, and the congestions of aisles which may occur, b) to analyze historical operational data from warehouse and to develop the set of benchmarks which could serve as the reference baseline results for further research, and c) to try outperform the baseline results set by the skilled and trained operational manager of the one of the biggest warehouses in the middle Europe.

Algorithms for the minimum sum coloring problem: a review

The Minimum Sum Coloring Problem (MSCP) is a variant of the well-known vertex coloring problem which has a number of AI related applications. Due to its theoretical and practical relevance, MSCP attracts increasing attention. The only existing review on the problem dates back to 2004 and mainly covers the history of MSCP and theoretical developments on specific graphs. In recent years, the field has witnessed significant progresses on approximation algorithms and practical solution algorithms. The purpose of this review is to provide a comprehensive inspection of the most recent and representative MSCP algorithms. To be informative, we identify the general framework followed by practical solution algorithms and the key ingredients that make them successful. By classifying the main search strategies and putting forward the critical elements of the reviewed methods, we wish to encourage future development of more powerful methods and motivate new applications