2,683 research outputs found
Fast Parallel Algorithms for the Subgraph Homeomorphism & the Subgraph Isomorphism Problems for Classes of Planar Graphs
23 pagesWe consider the problems of subgraph homeomorphism with fixed pattern graph,
recognition, and subgraph isomorphism for some classes of planar graphs. Following
the results of Robertson and Seymour on forbidden minor characterization, we show
that the problems of fixed subgraph homeomorphism and recognition for any family
of planar graphs closed under minor taking are in NC (i.e., they can be solved by an
algorithm running in poly-log time using polynomial number of processors). We also
show that the related subgraph isomorphism problem for biconnected outerplanar
·graphs is in NC. This is the first example of a restriction of subgraph isomorphism
to a non-trivial graph family admitting an NC algorith
Surface Split Decompositions and Subgraph Isomorphism in Graphs on Surfaces
The Subgraph Isomorphism problem asks, given a host graph G on n vertices and
a pattern graph P on k vertices, whether G contains a subgraph isomorphic to P.
The restriction of this problem to planar graphs has often been considered.
After a sequence of improvements, the current best algorithm for planar graphs
is a linear time algorithm by Dorn (STACS '10), with complexity .
We generalize this result, by giving an algorithm of the same complexity for
graphs that can be embedded in surfaces of bounded genus. At the same time, we
simplify the algorithm and analysis. The key to these improvements is the
introduction of surface split decompositions for bounded genus graphs, which
generalize sphere cut decompositions for planar graphs. We extend the algorithm
for the problem of counting and generating all subgraphs isomorphic to P, even
for the case where P is disconnected. This answers an open question by Eppstein
(SODA '95 / JGAA '99)
Induced Minor Free Graphs: Isomorphism and Clique-width
Given two graphs and , we say that contains as an induced
minor if a graph isomorphic to can be obtained from by a sequence of
vertex deletions and edge contractions. We study the complexity of Graph
Isomorphism on graphs that exclude a fixed graph as an induced minor. More
precisely, we determine for every graph that Graph Isomorphism is
polynomial-time solvable on -induced-minor-free graphs or that it is
GI-complete. Additionally, we classify those graphs for which
-induced-minor-free graphs have bounded clique-width. These two results
complement similar dichotomies for graphs that exclude a fixed graph as an
induced subgraph, minor, or subgraph.Comment: 16 pages, 5 figures. An extended abstract of this paper previously
appeared in the proceedings of the 41st International Workshop on
Graph-Theoretic Concepts in Computer Science (WG 2015
Diameter and Treewidth in Minor-Closed Graph Families
It is known that any planar graph with diameter D has treewidth O(D), and
this fact has been used as the basis for several planar graph algorithms. We
investigate the extent to which similar relations hold in other graph families.
We show that treewidth is bounded by a function of the diameter in a
minor-closed family, if and only if some apex graph does not belong to the
family. In particular, the O(D) bound above can be extended to bounded-genus
graphs. As a consequence, we extend several approximation algorithms and exact
subgraph isomorphism algorithms from planar graphs to other graph families.Comment: 15 pages, 12 figure
Grad and Classes with Bounded Expansion II. Algorithmic Aspects
Classes of graphs with bounded expansion are a generalization of both proper
minor closed classes and degree bounded classes. Such classes are based on a
new invariant, the greatest reduced average density (grad) of G with rank r,
∇r(G). These classes are also characterized by the existence of several
partition results such as the existence of low tree-width and low tree-depth
colorings. These results lead to several new linear time algorithms, such as an
algorithm for counting all the isomorphs of a fixed graph in an input graph or
an algorithm for checking whether there exists a subset of vertices of a priori
bounded size such that the subgraph induced by this subset satisfies some
arbirtrary but fixed first order sentence. We also show that for fixed p,
computing the distances between two vertices up to distance p may be performed
in constant time per query after a linear time preprocessing. We also show,
extending several earlier results, that a class of graphs has sublinear
separators if it has sub-exponential expansion. This result result is best
possible in general
Frequent Subgraph Mining in Outerplanar Graphs
In recent years there has been an increased interest in frequent pattern discovery in large databases of graph structured objects. While the frequent connected subgraph mining problem for tree datasets can be solved in incremental polynomial time, it becomes intractable for arbitrary graph databases. Existing approaches have therefore resorted to various heuristic strategies and restrictions of the search space, but have not identified a practically relevant tractable graph class beyond trees. In this paper, we define the class of so called tenuous outerplanar graphs, a strict generalization of trees, develop a frequent subgraph mining algorithm for tenuous outerplanar graphs that works in incremental polynomial time, and evaluate the algorithm empirically on the NCI molecular graph dataset
Frequent Subgraph Mining in Outerplanar Graphs
In recent years there has been an increased interest in frequent pattern discovery in large databases of graph structured objects. While the frequent connected subgraph mining problem for tree datasets can be solved in incremental polynomial time, it becomes intractable for arbitrary graph databases. Existing approaches have therefore resorted to various heuristic strategies and restrictions of the search space, but have not identified a practically relevant tractable graph class beyond trees. In this paper, we define the class of so called tenuous outerplanar graphs, a strict generalization of trees, develop a frequent subgraph mining algorithm for tenuous outerplanar graphs that works in incremental polynomial time, and evaluate the algorithm empirically on the NCI molecular graph dataset
Negative association in uniform forests and connected graphs
We consider three probability measures on subsets of edges of a given finite
graph , namely those which govern, respectively, a uniform forest, a uniform
spanning tree, and a uniform connected subgraph. A conjecture concerning the
negative association of two edges is reviewed for a uniform forest, and a
related conjecture is posed for a uniform connected subgraph. The former
conjecture is verified numerically for all graphs having eight or fewer
vertices, or having nine vertices and no more than eighteen edges, using a
certain computer algorithm which is summarised in this paper. Negative
association is known already to be valid for a uniform spanning tree. The three
cases of uniform forest, uniform spanning tree, and uniform connected subgraph
are special cases of a more general conjecture arising from the random-cluster
model of statistical mechanics.Comment: With minor correction
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