45,940 research outputs found
High Performance Biological Pairwise Sequence Alignment: FPGA versus GPU versus Cell BE versus GPP
This paper explores the pros and cons of reconfigurable computing in the form of FPGAs for high performance efficient computing. In particular, the paper presents the results of a comparative study between three different acceleration technologies, namely, Field Programmable Gate Arrays (FPGAs), Graphics Processor Units (GPUs), and IBM’s Cell Broadband Engine (Cell BE), in the design and implementation of the widely-used Smith-Waterman pairwise sequence alignment algorithm, with general purpose processors as a base reference implementation. Comparison criteria include speed, energy consumption, and purchase and development costs. The study shows that FPGAs largely outperform all other implementation platforms on performance per watt criterion and perform better than all other platforms on performance per dollar criterion, although by a much smaller margin. Cell BE and GPU come second and third, respectively, on both performance per watt and performance per dollar criteria. In general, in order to outperform other technologies on performance per dollar criterion (using currently available hardware and development tools), FPGAs need to achieve at least two orders of magnitude speed-up compared to general-purpose processors and one order of magnitude speed-up compared to domain-specific technologies such as GPUs
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Human-Centered Approaches in Geovisualization Design: Investigating Multiple Methods Through a Long-Term Case Study
Working with three domain specialists we investigate human-centered approaches to geovisualization following an
ISO13407 taxonomy covering context of use, requirements and early stages of design. Our case study, undertaken over three years, draws attention to repeating trends: that generic approaches fail to elicit adequate requirements for geovis application design; that the use of real data is key to understanding needs and possibilities; that trust and knowledge must be built and developed with collaborators. These processes take time but modified human-centred approaches can be effective. A scenario developed through contextual inquiry but supplemented with domain data and graphics is useful to geovis designers. Wireframe, paper and digital prototypes enable successful communication between specialist and geovis domains when incorporating real and interesting data, prompting exploratory behaviour and eliciting previously unconsidered requirements. Paper prototypes are particularly successful at eliciting suggestions, especially for novel visualization. Enabling specialists to explore their data freely with a digital prototype is as effective as using a structured task protocol and is easier to administer. Autoethnography has potential for framing the design process. We conclude that a common understanding of context of use, domain data and visualization possibilities are essential to successful geovis design and develop as this progresses. HC approaches can make a significant contribution here. However, modified approaches, applied with flexibility, are most promising. We advise early, collaborative engagement with data – through simple, transient visual artefacts supported by data sketches and existing designs – before moving to successively more sophisticated data wireframes and data prototypes
Relevance, benefits, and problems of software modelling and model driven techniques—A survey in the Italian industry
Context Claimed benefits of software modelling and model driven techniques are improvements in productivity, portability, maintainability and interoperability. However, little effort has been devoted at collecting evidence to evaluate their actual relevance, benefits and usage complications. Goal The main goals of this paper are: (1) assess the diffusion and relevance of software modelling and MD techniques in the Italian industry, (2) understand the expected and achieved benefits, and (3) identify which problems limit/prevent their diffusion. Method We conducted an exploratory personal opinion survey with a sample of 155 Italian software professionals by means of a Web-based questionnaire on-line from February to April 2011. Results Software modelling and MD techniques are very relevant in the Italian industry. The adoption of simple modelling brings common benefits (better design support, documentation improvement, better maintenance, and higher software quality), while MD techniques make it easier to achieve: improved standardization, higher productivity, and platform independence. We identified problems, some hindering adoption (too much effort required and limited usefulness) others preventing it (lack of competencies and supporting tools). Conclusions The relevance represents an important objective motivation for researchers in this area. The relationship between techniques and attainable benefits represents an instrument for practitioners planning the adoption of such techniques. In addition the findings may provide hints for companies and universitie
Managing Research Data in Big Science
The project which led to this report was funded by JISC in 2010--2011 as part of its 'Managing Research Data' programme, to examine the way in which Big Science data is managed, and produce any recommendations which may be appropriate. Big science data is different: it comes in large volumes, and it is shared and exploited in ways which may differ from other disciplines. This project has explored these differences using as a case-study Gravitational Wave data generated by the LSC, and has produced recommendations intended to be useful variously to JISC, the funding council (STFC) and the LSC community. In Sect. 1 we define what we mean by 'big science', describe the overall data culture there, laying stress on how it necessarily or contingently differs from other disciplines. In Sect. 2 we discuss the benefits of a formal data-preservation strategy, and the cases for open data and for well-preserved data that follow from that. This leads to our recommendations that, in essence, funders should adopt rather light-touch prescriptions regarding data preservation planning: normal data management practice, in the areas under study, corresponds to notably good practice in most other areas, so that the only change we suggest is to make this planning more formal, which makes it more easily auditable, and more amenable to constructive criticism. In Sect. 3 we briefly discuss the LIGO data management plan, and pull together whatever information is available on the estimation of digital preservation costs. The report is informed, throughout, by the OAIS reference model for an open archive
Agile Requirements Engineering: A systematic literature review
Nowadays, Agile Software Development (ASD) is used to cope with increasing complexity in system development. Hybrid development models, with the integration of User-Centered Design (UCD), are applied with the aim to deliver competitive products with a suitable User Experience (UX). Therefore, stakeholder and user involvement during Requirements Engineering (RE) are essential in order to establish a collaborative environment with constant feedback loops. The aim of this study is to capture the current state of the art of the literature related to Agile RE with focus on stakeholder and user involvement. In particular, we investigate what approaches exist to involve stakeholder in the process, which methodologies are commonly used to present the user perspective and how requirements management is been carried out.
We conduct a Systematic Literature Review (SLR) with an extensive quality assessment of the included studies. We identified 27 relevant papers. After analyzing them in detail, we derive deep insights to the following aspects of Agile RE: stakeholder and user involvement, data gathering, user perspective, integrated methodologies, shared understanding, artifacts, documentation and Non-Functional Requirements (NFR). Agile RE is a complex research field with cross-functional influences. This study will contribute to the software development body of knowledge by assessing the involvement of stakeholder and user in Agile RE, providing methodologies that make ASD more human-centric and giving an overview of requirements management in ASD.Ministerio de Economía y Competitividad TIN2013-46928-C3-3-RMinisterio de Economía y Competitividad TIN2015-71938-RED
Managing Research Data: Gravitational Waves
The project which led to this report was funded by JISC in 2010–2011 as part of its
‘Managing Research Data’ programme, to examine the way in which Big Science data
is managed, and produce any recommendations which may be appropriate.
Big science data is different: it comes in large volumes, and it is shared and
exploited in ways which may differ from other disciplines. This project has explored
these differences using as a case-study Gravitational Wave data generated by the LSC,
and has produced recommendations intended to be useful variously to JISC, the funding
council (STFC) and the LSC community.
In Sect. 1 we define what we mean by ‘big science’, describe the overall data
culture there, laying stress on how it necessarily or contingently differs from other
disciplines.
In Sect. 2 we discuss the benefits of a formal data-preservation strategy, and the
cases for open data and for well-preserved data that follow from that. This leads to our
recommendations that, in essence, funders should adopt rather light-touch prescriptions
regarding data preservation planning: normal data management practice, in the areas
under study, corresponds to notably good practice in most other areas, so that the only
change we suggest is to make this planning more formal, which makes it more easily
auditable, and more amenable to constructive criticism.
In Sect. 3 we briefly discuss the LIGO data management plan, and pull together
whatever information is available on the estimation of digital preservation costs.
The report is informed, throughout, by the OAIS reference model for an open
archive. Some of the report’s findings and conclusions were summarised in [1].
See the document history on page 37
Well Performance Tracking in a Mature Waterflood Asset
Imperial Users onl
Safety-Critical Systems and Agile Development: A Mapping Study
In the last decades, agile methods had a huge impact on how software is
developed. In many cases, this has led to significant benefits, such as quality
and speed of software deliveries to customers. However, safety-critical systems
have widely been dismissed from benefiting from agile methods. Products that
include safety critical aspects are therefore faced with a situation in which
the development of safety-critical parts can significantly limit the potential
speed-up through agile methods, for the full product, but also in the
non-safety critical parts. For such products, the ability to develop
safety-critical software in an agile way will generate a competitive advantage.
In order to enable future research in this important area, we present in this
paper a mapping of the current state of practice based on {a mixed method
approach}. Starting from a workshop with experts from six large Swedish product
development companies we develop a lens for our analysis. We then present a
systematic mapping study on safety-critical systems and agile development
through this lens in order to map potential benefits, challenges, and solution
candidates for guiding future research.Comment: Accepted at Euromicro Conf. on Software Engineering and Advanced
Applications 2018, Prague, Czech Republi
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