Semantic Segmentation of Pathological Lung Tissue with Dilated Fully Convolutional Networks

Early and accurate diagnosis of interstitial lung diseases (ILDs) is crucial for making treatment decisions, but can be challenging even for experienced radiologists. The diagnostic procedure is based on the detection and recognition of the different ILD pathologies in thoracic CT scans, yet their manifestation often appears similar. In this study, we propose the use of a deep purely convolutional neural network for the semantic segmentation of ILD patterns, as the basic component of a computer aided diagnosis (CAD) system for ILDs. The proposed CNN, which consists of convolutional layers with dilated filters, takes as input a lung CT image of arbitrary size and outputs the corresponding label map. We trained and tested the network on a dataset of 172 sparsely annotated CT scans, within a cross-validation scheme. The training was performed in an end-to-end and semi-supervised fashion, utilizing both labeled and non-labeled image regions. The experimental results show significant performance improvement with respect to the state of the art

Multimodal Subspace Support Vector Data Description

In this paper, we propose a novel method for projecting data from multiple modalities to a new subspace optimized for one-class classification. The proposed method iteratively transforms the data from the original feature space of each modality to a new common feature space along with finding a joint compact description of data coming from all the modalities. For data in each modality, we define a separate transformation to map the data from the corresponding feature space to the new optimized subspace by exploiting the available information from the class of interest only. We also propose different regularization strategies for the proposed method and provide both linear and non-linear formulations. The proposed Multimodal Subspace Support Vector Data Description outperforms all the competing methods using data from a single modality or fusing data from all modalities in four out of five datasets.Comment: 26 pages manuscript (6 tables, 2 figures), 24 pages supplementary material (27 tables, 10 figures). The manuscript and supplementary material are combined as a single .pdf (50 pages) fil

Advances in Hyperspectral Image Classification Methods for Vegetation and Agricultural Cropland Studies

Hyperspectral data are becoming more widely available via sensors on airborne and unmanned aerial vehicle (UAV) platforms, as well as proximal platforms. While space-based hyperspectral data continue to be limited in availability, multiple spaceborne Earth-observing missions on traditional platforms are scheduled for launch, and companies are experimenting with small satellites for constellations to observe the Earth, as well as for planetary missions. Land cover mapping via classification is one of the most important applications of hyperspectral remote sensing and will increase in significance as time series of imagery are more readily available. However, while the narrow bands of hyperspectral data provide new opportunities for chemistry-based modeling and mapping, challenges remain. Hyperspectral data are high dimensional, and many bands are highly correlated or irrelevant for a given classification problem. For supervised classification methods, the quantity of training data is typically limited relative to the dimension of the input space. The resulting Hughes phenomenon, often referred to as the curse of dimensionality, increases potential for unstable parameter estimates, overfitting, and poor generalization of classifiers. This is particularly problematic for parametric approaches such as Gaussian maximum likelihoodbased classifiers that have been the backbone of pixel-based multispectral classification methods. This issue has motivated investigation of alternatives, including regularization of the class covariance matrices, ensembles of weak classifiers, development of feature selection and extraction methods, adoption of nonparametric classifiers, and exploration of methods to exploit unlabeled samples via semi-supervised and active learning. Data sets are also quite large, motivating computationally efficient algorithms and implementations. This chapter provides an overview of the recent advances in classification methods for mapping vegetation using hyperspectral data. Three data sets that are used in the hyperspectral classification literature (e.g., Botswana Hyperion satellite data and AVIRIS airborne data over both Kennedy Space Center and Indian Pines) are described in Section 3.2 and used to illustrate methods described in the chapter. An additional high-resolution hyperspectral data set acquired by a SpecTIR sensor on an airborne platform over the Indian Pines area is included to exemplify the use of new deep learning approaches, and a multiplatform example of airborne hyperspectral data is provided to demonstrate transfer learning in hyperspectral image classification. Classical approaches for supervised and unsupervised feature selection and extraction are reviewed in Section 3.3. In particular, nonlinearities exhibited in hyperspectral imagery have motivated development of nonlinear feature extraction methods in manifold learning, which are outlined in Section 3.3.1.4. Spatial context is also important in classification of both natural vegetation with complex textural patterns and large agricultural fields with significant local variability within fields. Approaches to exploit spatial features at both the pixel level (e.g., co-occurrencebased texture and extended morphological attribute profiles [EMAPs]) and integration of segmentation approaches (e.g., HSeg) are discussed in this context in Section 3.3.2. Recently, classification methods that leverage nonparametric methods originating in the machine learning community have grown in popularity. An overview of both widely used and newly emerging approaches, including support vector machines (SVMs), Gaussian mixture models, and deep learning based on convolutional neural networks is provided in Section 3.4. Strategies to exploit unlabeled samples, including active learning and metric learning, which combine feature extraction and augmentation of the pool of training samples in an active learning framework, are outlined in Section 3.5. Integration of image segmentation with classification to accommodate spatial coherence typically observed in vegetation is also explored, including as an integrated active learning system. Exploitation of multisensor strategies for augmenting the pool of training samples is investigated via a transfer learning framework in Section 3.5.1.2. Finally, we look to the future, considering opportunities soon to be provided by new paradigms, as hyperspectral sensing is becoming common at multiple scales from ground-based and airborne autonomous vehicles to manned aircraft and space-based platforms

An Analytical Performance Evaluation on Multiview Clustering Approaches

The concept of machine learning encompasses a wide variety of different approaches, one of which is called clustering. The data points are grouped together in this approach to the problem. Using a clustering method, it is feasible, given a collection of data points, to classify each data point as belonging to a specific group. This can be done if the algorithm is given the collection of data points. In theory, data points that constitute the same group ought to have attributes and characteristics that are equivalent to one another, however data points that belong to other groups ought to have properties and characteristics that are very different from one another. The generation of multiview data is made possible by recent developments in information collecting technologies. The data were collected from à variety of sources and were analysed using a variety of perspectives. The data in question are what are known as multiview data. On a single view, the conventional clustering algorithms are applied. In spite of this, real-world data are complicated and can be clustered in a variety of different ways, depending on how the data are interpreted. In practise, the real-world data are messy. In recent years, Multiview Clustering, often known as MVC, has garnered an increasing amount of attention due to its goal of utilising complimentary and consensus information derived from different points of view. On the other hand, the vast majority of the systems that are currently available only enable the single-clustering scenario, whereby only makes utilization of a single cluster to split the data. This is the case since there is only one cluster accessible. In light of this, it is absolutely necessary to carry out investigation on the multiview data format. The study work is centred on multiview clustering and how well it performs compared to these other strategies

Security Evaluation of Support Vector Machines in Adversarial Environments

Support Vector Machines (SVMs) are among the most popular classification techniques adopted in security applications like malware detection, intrusion detection, and spam filtering. However, if SVMs are to be incorporated in real-world security systems, they must be able to cope with attack patterns that can either mislead the learning algorithm (poisoning), evade detection (evasion), or gain information about their internal parameters (privacy breaches). The main contributions of this chapter are twofold. First, we introduce a formal general framework for the empirical evaluation of the security of machine-learning systems. Second, according to our framework, we demonstrate the feasibility of evasion, poisoning and privacy attacks against SVMs in real-world security problems. For each attack technique, we evaluate its impact and discuss whether (and how) it can be countered through an adversary-aware design of SVMs. Our experiments are easily reproducible thanks to open-source code that we have made available, together with all the employed datasets, on a public repository.Comment: 47 pages, 9 figures; chapter accepted into book 'Support Vector Machine Applications