A fast external force field for parametric active contour segmentation

Active contours or snakes are widely used for segmentation and tracking. We propose a new active contour model, which converges reliably even when the initialization is far from the object of interest. The proposed segmentation technique uses an external energy function where the energy slowly decreases in the vicinity of an edge. Based on this energy a new external force field is defined. Both energy function and force field are calculated using an efficient dual scan line algorithm. The proposed force field is tested on computational speed, its effect on the convergence speed of the active contour and the segmentation result. The proposed method gets similar segmentation results as the gradient vector flow and vector field convolution active contours, but the force field needs significantly less time to calculate

A computational efficient external energy for active contour segmentation using edge propagation

Active contours or snakes are widely used for segmentation and tracking. We propose a new active contour model, which converges reliably even when the initialization is far from the object of interest. The proposed segmentation technique uses an external energy function where the energy slowly decreases in the vicinity of an edge. This new energy function is calculated using an efficient dual scan line algorithm. The proposed energy function is tested on computational speed, its effect on the convergence speed of the active contour and the segmentation result. The proposed method gets similar segmentation results as the gradient vector flow active contours, but the energy function needs much less time to calculate

Crop conditional Convolutional Neural Networks for massive multi-crop plant disease classification over cell phone acquired images taken on real field conditions

Convolutional Neural Networks (CNN) have demonstrated their capabilities on the agronomical field, especially for plant visual symptoms assessment. As these models grow both in the number of training images and in the number of supported crops and diseases, there exist the dichotomy of (1) generating smaller models for specific crop or, (2) to generate a unique multi-crop model in a much more complex task (especially at early disease stages) but with the benefit of the entire multiple crop image dataset variability to enrich image feature description learning. In this work we first introduce a challenging dataset of more than one hundred-thousand images taken by cell phone in real field wild conditions. This dataset contains almost equally distributed disease stages of seventeen diseases and five crops (wheat, barley, corn, rice and rape-seed) where several diseases can be present on the same picture. When applying existing state of the art deep neural network methods to validate the two hypothesised approaches, we obtained a balanced accuracy (BAC=0.92) when generating the smaller crop specific models and a balanced accuracy (BAC=0.93) when generating a single multi-crop model. In this work, we propose three different CNN architectures that incorporate contextual non-image meta-data such as crop information onto an image based Convolutional Neural Network. This combines the advantages of simultaneously learning from the entire multi-crop dataset while reducing the complexity of the disease classification tasks. The crop-conditional plant disease classification network that incorporates the contextual information by concatenation at the embedding vector level obtains a balanced accuracy of 0.98 improving all previous methods and removing 71% of the miss-classifications of the former methods

Exploration and Comparison of Image-based Techniques for Strawberry Detection

Strawberry is an important cash crop in California, and its supply accounts for 80% of the US market [2]. However, in current practice, strawberries are picked manually, which is very labor-intensive and time-consuming. In addition, the farmers need to hire an appropriate number of laborers to harvest the berries based on the estimated volume. When overestimating the yield, it will cause a waste of human resources, while underestimating the yield will cause the loss of the strawberry harvest [3]. Therefore, accurately estimating harvest volume in the field is important to farmers. This paper focuses on an image-based solution to detect strawberries in the field by using the traditional computer vision technique and deep learning method. When strawberries are in different growth stages, there are considerable differences in their color. Therefore, various color spaces are first studied in this work, and the most effective color components are used in detecting strawberries and differentiating mature and immature strawberries. In some color channels such as the R color channel from the RGB color model, Hue color channel from the HSV color model, \u27a\u27 color channel from the Lab color model, the pixels belonging to ripe strawberries are clearly distinguished from the background pixels. Thus, the color-based K-mean cluster algorithm to detect red strawberries will be exploited. Finally, it achieves a 90.5% truth-positive rate for detecting red strawberries. For detecting the unripe strawberry, this thesis first trained the Support Vector Machine classifier based on the HOG feature. After optimizing the classifier through hard negative mining, the truth-positive rate reached 81.11%. Finally, when exploring the deep learning model, two detectors based on different pre-trained models were trained using TensorFlow Object Detection API with the acceleration of Amazon Web Services\u27 GPU instance. When detecting in a single strawberry plant image, they have achieved truth-positive rates of 89.2% and 92.3%, respectively; while in the strawberry field image with multiple plants, they have reached 85.5% and 86.3%

ToScA North America (6 – 8 June 2017, The University of Texas, Austin, TX) Program

ToScA North America will address key areas of science, including Multi-modal Imaging, Geosciences, Forensics, Increasing Contrast, Educational Outreach, Data, Materials Science and Medical and Biological Science.University of Texas High-Resolution X-ray CT Facility (UTCT); Jackson School of Geosciences, The University of Texas at Austin; Natural History Museum (London); Royal Microscopical Society (Oxford, UK)Geological Science

Reliable and Automatic Recognition of Leaf Disease Detection using Optimal Monarch Ant Lion Recurrent Learning

Around 7.5 billion people worldwide depend on agriculture production for their livelihood, making it an essential component in keeping life alive on the planet. Negative impacts are being caused on the agroecosystem due to the rapid increase in the use of chemicals to combat plant diseases. These chemicals include fungicides, bactericides, and insecticides. Both the quantity and quality of the output are impacted when there is a high-scale prevalence of diseases in crops. Plant diseases provide a significant obstacle for the agricultural industry, which has a negative impact on the growth of plants and the output of crops. The problem of early detection and diagnosis of diseases can be solved for the benefit of the farming community by employing a method that is both quick and reliable regularly. This article proposes a model for the detection and diagnosis of leaf infection called the Automatic Optimal Monarch AntLion Recurrent Learning (MALRL) model, which attains a greater authenticity. The design of a hybrid version of the Monarch Butter Fly optimization algorithm and the AntLion Optimization Algorithm is incorporated into the MALRL technique that has been proposed. In the leaf image, it is used to determine acceptable aspects of impacted regions. After that, the optimal characteristics are used to aid the Long Short Term Neural Network (LSTM) classifier to speed up the process of lung disease categorization. The experiment's findings are analyzed and compared to those of ANN, CNN, and DNN. The proposed method was successful in achieving a high level of accuracy when detecting leaf disease for images of healthy leaves in comparison to other conventional methods

OpenCFU, a New Free and Open-Source Software to Count Cell Colonies and Other Circular Objects

Counting circular objects such as cell colonies is an important source of information for biologists. Although this task is often time-consuming and subjective, it is still predominantly performed manually. The aim of the present work is to provide a new tool to enumerate circular objects from digital pictures and video streams. Here, I demonstrate that the created program, OpenCFU, is very robust, accurate and fast. In addition, it provides control over the processing parameters and is implemented in an in- tuitive and modern interface. OpenCFU is a cross-platform and open-source software freely available at http://opencfu.sourceforge.net