Boundary graph grammars with dynamic edge relabeling

AbstractMost NLC-like graph grammars generate node-labeled graphs. As one of the exceptions, eNCE graph grammars generate graphs with edge labels as well. We investigate this type of graph grammar and show that the use of edge labels (together with the NCE feature) is responsible for some new properties. Especially boundary eNCE (B-eNCE) grammars are considered. First, although eNCE grammars have the context-sensitive feature of “blocking edges,” we show that B-eNCE grammars do not. Second, we show the existence of a Chomsky normal form and a Greibach normal form for B-eNCE grammars. Third, the boundary eNCE languages are characterized in terms of regular tree and string languages. Fourth, we prove that the class of (boundary) eNCE languages properly contains the closure of the class of (boundary) NLC languages under node relabelings. Analogous results are shown for linear eNCE grammars

Graph Transformations and Game Theory: A Generative Mechanism for Network Formation

Many systems can be described in terms of networks with characteristic structural properties. To better understand the formation and the dynamics of complex networks one can develop generative models. We propose here a generative model (named dynamic spatial game) that combines graph transformations and game theory. The idea is that a complex network is obtained by a sequence of node-based transformations determined by the interactions of nodes present in the network. We model the node-based transformations by using graph grammars and the interactions between the nodes by using game theory. We illustrate dynamic spatial games on a couple of examples: the role of cooperation in tissue formation and tumor development and the emergence of patterns during the formation of ecological networks

On Some Closure Properties of nc-eNCE Graph Grammars

In the study of automata and grammars, closure properties of the associated languages have been studied extensively. In particular, closure properties of various types of graph grammars have been examined in (Rozenberg and Welzl, Inf. and Control,1986) and (Rozenberg and Welzl, Acta Informatica,1986). In this paper we examine some critical closure properties of the nc-eNCE graph grammars discussed in (Jayakrishna and Mathew, Symmetry 2023) and (Jayakrishna and Mathew, ICMICDS 2022).Comment: 14 pages,9 figures, to be submitted to Theory of Computin

Symbol–Relation Grammars: A Formalism for Graphical Languages

AbstractA common approach to the formal description of pictorial and visual languages makes use of formal grammars and rewriting mechanisms. The present paper is concerned with the formalism of Symbol–Relation Grammars (SR grammars, for short). Each sentence in an SR language is composed of a set of symbol occurrences representing visual elementary objects, which are related through a set of binary relational items. The main feature of SR grammars is the uniform way they use context-free productions to rewrite symbol occurrences as well as relation items. The clearness and uniformity of the derivation process for SR grammars allow the extension of well-established techniques of syntactic and semantic analysis to the case of SR grammars. The paper provides an accurate analysis of the derivation mechanism and the expressive power of the SR formalism. This is necessary to fully exploit the capabilities of the model. The most meaningful features of SR grammars as well as their generative power are compared with those of well-known graph grammar families. In spite of their structural simplicity, variations of SR grammars have a generative power comparable with that of expressive classes of graph grammars, such as the edNCE and the N-edNCE classes

SAGA: A project to automate the management of software production systems

The Software Automation, Generation and Administration (SAGA) project is investigating the design and construction of practical software engineering environments for developing and maintaining aerospace systems and applications software. The research includes the practical organization of the software lifecycle, configuration management, software requirements specifications, executable specifications, design methodologies, programming, verification, validation and testing, version control, maintenance, the reuse of software, software libraries, documentation, and automated management

A Graphical User Interface for Designing Graph Grammars

Graph grammar has been widely applied in many scientific areas. However, designing graph grammar is very challenging for users without strong computer science background. This paper presents a graphical user interface (GUI) for designing graph grammars following an edge-based context-sensitive graph grammar formalism, EGG. This GUI significantly eases graph grammar design, especially for users unfamiliar with the grammar format

A New Class of Graph Grammars and Modelling of Certain Biological Structures

Graph grammars can be used to model the development of diverse graph families. Since their creation in the late 1960s, graph grammars have found usage in a variety of fields, such as the design of sophisticated computer systems and electronic circuits, as well as visual languages, computer animation, and even the modelling of intricate molecular structures Replacement of edges and nodes are the two primary approaches of graph rewriting. In this paper we introduce a new type of node replacement graph grammar known as nc-eNCE graph grammar. With this new class of graph grammars we generated certain graph classes and we showed that these class of graph grammars are more powerful than the existing edge and node controlled embedding graph grammars. In addition, these graph grammars were used to model several common protein secondary structures such as parallel and anti-parallel b-sheet structures in different configurations. The use of these graph grammars in modelling other bio-chemical structures and their interactions remains to be explored