Probabilistic regular graphs

Deterministic graph grammars generate regular graphs, that form a structural extension of configuration graphs of pushdown systems. In this paper, we study a probabilistic extension of regular graphs obtained by labelling the terminal arcs of the graph grammars by probabilities. Stochastic properties of these graphs are expressed using PCTL, a probabilistic extension of computation tree logic. We present here an algorithm to perform approximate verification of PCTL formulae. Moreover, we prove that the exact model-checking problem for PCTL on probabilistic regular graphs is undecidable, unless restricting to qualitative properties. Our results generalise those of EKM06, on probabilistic pushdown automata, using similar methods combined with graph grammars techniques.Comment: In Proceedings INFINITY 2010, arXiv:1010.611

Attenuation Regulation as a Term Rewriting System

The classical attenuation regulation of gene expression in bacteria is considered. We propose to represent the secondary RNA structure in the leader region of a gene or an operon by a term, and we give a probabilistic term rewriting system modeling the whole process of such a regulation.Comment: to appea

Strategic Port Graph Rewriting: An Interactive Modelling and Analysis Framework

We present strategic portgraph rewriting as a basis for the implementation of visual modelling and analysis tools. The goal is to facilitate the specification, analysis and simulation of complex systems, using port graphs. A system is represented by an initial graph and a collection of graph rewriting rules, together with a user-defined strategy to control the application of rules. The strategy language includes constructs to deal with graph traversal and management of rewriting positions in the graph. We give a small-step operational semantics for the language, and describe its implementation in the graph transformation and visualisation tool PORGY.Comment: In Proceedings GRAPHITE 2014, arXiv:1407.767

Statistical Model Checking of e-Motions Domain-Specific Modeling Languages

Domain experts may use novel tools that allow them to de- sign and model their systems in a notation very close to the domain problem. However, the use of tools for the statistical analysis of stochas- tic systems requires software engineers to carefully specify such systems in low level and specific languages. In this work we line up both sce- narios, specific domain modeling and statistical analysis. Specifically, we have extended the e-Motions system, a framework to develop real-time domain-specific languages where the behavior is specified in a natural way by in-place transformation rules, to support the statistical analysis of systems defined using it. We discuss how restricted e-Motions sys- tems are used to produce Maude corresponding specifications, using a model transformation from e-Motions to Maude, which comply with the restrictions of the VeStA tool, and which can therefore be used to per- form statistical analysis on the stochastic systems thus generated. We illustrate our approach with a very simple messaging distributed system.Universidad de Málaga Campus de Excelencia Internacional Andalucía Tech. Research Project TIN2014-52034-R an

The probability of non-confluent systems

We show how to provide a structure of probability space to the set of execution traces on a non-confluent abstract rewrite system, by defining a variant of a Lebesgue measure on the space of traces. Then, we show how to use this probability space to transform a non-deterministic calculus into a probabilistic one. We use as example Lambda+, a recently introduced calculus defined through type isomorphisms.Comment: In Proceedings DCM 2013, arXiv:1403.768