Parametric polymorphism and operational improvement

Parametricity, in both operational and denotational forms, has long been a useful tool for reasoning about program correctness. However, there is as yet no comparable technique for reasoning about program improvement, that is, when one program uses fewer resources than another. Existing theories of parametricity cannot be used to address this problem as they are agnostic with regard to resource usage. This article addresses this problem by presenting a new operational theory of parametricity that is sensitive to time costs, which can be used to reason about time improvement properties. We demonstrate the applicability of our theory by showing how it can be used to prove that a number of well-known program fusion techniques are time improvements, including fixed point fusion, map fusion and short cut fusion

Strategic polymorphism requires just two combinators!

In previous work, we introduced the notion of functional strategies: first-class generic functions that can traverse terms of any type while mixing uniform and type-specific behaviour. Functional strategies transpose the notion of term rewriting strategies (with coverage of traversal) to the functional programming paradigm. Meanwhile, a number of Haskell-based models and combinator suites were proposed to support generic programming with functional strategies. In the present paper, we provide a compact and matured reconstruction of functional strategies. We capture strategic polymorphism by just two primitive combinators. This is done without commitment to a specific functional language. We analyse the design space for implementational models of functional strategies. For completeness, we also provide an operational reference model for implementing functional strategies (in Haskell). We demonstrate the generality of our approach by reconstructing representative fragments of the Strafunski library for functional strategies.Comment: A preliminary version of this paper was presented at IFL 2002, and included in the informal preproceedings of the worksho

An empirical study evaluating depth of inheritance on the maintainability of object-oriented software

This empirical research was undertaken as part of a multi-method programme of research to investigate unsupported claims made of object-oriented technology. A series of subject-based laboratory experiments, including an internal replication, tested the effect of inheritance depth on the maintainability of object-oriented software. Subjects were timed performing identical maintenance tasks on object-oriented software with a hierarchy of three levels of inheritance depth and equivalent object-based software with no inheritance. This was then replicated with more experienced subjects. In a second experiment of similar design, subjects were timed performing identical maintenance tasks on object-oriented software with a hierarchy of five levels of inheritance depth and the equivalent object-based software. The collected data showed that subjects maintaining object-oriented software with three levels of inheritance depth performed the maintenance tasks significantly quicker than those maintaining equivalent object-based software with no inheritance. In contrast, subjects maintaining the object-oriented software with five levels of inheritance depth took longer, on average, than the subjects maintaining the equivalent object-based software (although statistical significance was not obtained). Subjects' source code solutions and debriefing questionnaires provided some evidence suggesting subjects began to experience diffculties with the deeper inheritance hierarchy. It is not at all obvious that object-oriented software is going to be more maintainable in the long run. These findings are sufficiently important that attempts to verify the results should be made by independent researchers

Modular, Fully-abstract Compilation by Approximate Back-translation

A compiler is fully-abstract if the compilation from source language programs to target language programs reflects and preserves behavioural equivalence. Such compilers have important security benefits, as they limit the power of an attacker interacting with the program in the target language to that of an attacker interacting with the program in the source language. Proving compiler full-abstraction is, however, rather complicated. A common proof technique is based on the back-translation of target-level program contexts to behaviourally-equivalent source-level contexts. However, constructing such a back- translation is problematic when the source language is not strong enough to embed an encoding of the target language. For instance, when compiling from STLC to ULC, the lack of recursive types in the former prevents such a back-translation. We propose a general and elegant solution for this problem. The key insight is that it suffices to construct an approximate back-translation. The approximation is only accurate up to a certain number of steps and conservative beyond that, in the sense that the context generated by the back-translation may diverge when the original would not, but not vice versa. Based on this insight, we describe a general technique for proving compiler full-abstraction and demonstrate it on a compiler from STLC to ULC. The proof uses asymmetric cross-language logical relations and makes innovative use of step-indexing to express the relation between a context and its approximate back-translation. The proof extends easily to common compiler patterns such as modular compilation and it, to the best of our knowledge, it is the first compiler full abstraction proof to have been fully mechanised in Coq. We believe this proof technique can scale to challenging settings and enable simpler, more scalable proofs of compiler full-abstraction

Near-optimal Assembly for Shotgun Sequencing with Noisy Reads

Recent work identified the fundamental limits on the information requirements in terms of read length and coverage depth required for successful de novo genome reconstruction from shotgun sequencing data, based on the idealistic assumption of no errors in the reads (noiseless reads). In this work, we show that even when there is noise in the reads, one can successfully reconstruct with information requirements close to the noiseless fundamental limit. A new assembly algorithm, X-phased Multibridging, is designed based on a probabilistic model of the genome. It is shown through analysis to perform well on the model, and through simulations to perform well on real genomes

Haskell for OCaml programmers

This introduction to Haskell is written to optimize learning by programmers who already know OCaml.Comment: 16 page

Strategic polymorphism requires just two combinators!

In previous work, we introduced the notion of functional strategies: first-class generic functions that can traverse terms of any type while mixing uniform and type-specific behaviour. Functional strategies transpose the notion of term rewriting strategies (with coverage of traversal) to the functional programming paradigm. Meanwhile, a number of Haskell-based models and combinator suites were proposed to support generic programming with functional strategies. In the present paper, we provide a compact and matured reconstruction of functional strategies. We capture strategic polymorphism by just two primitive combinators. This is done without commitment to a specific functional language. We analyse the design space for implementational models of functional strategies. For completeness, we also provide an operational reference model for implementing functional strategies (in Haskell). We demonstrate the generality of our approach by reconstructing representative fragments of the Strafunski library for functional strategies