Optimizing construction of scheduled data flow graph for on-line testability

The objective of this work is to develop a new methodology for behavioural synthesis using a flow of synthesis, better suited to the scheduling of independent calculations and non-concurrent online testing. The traditional behavioural synthesis process can be defined as the compilation of an algorithmic specification into an architecture composed of a data path and a controller. This stream of synthesis generally involves scheduling, resource allocation, generation of the data path and controller synthesis. Experiments showed that optimization started at the high level synthesis improves the performance of the result, yet the current tools do not offer synthesis optimizations that from the RTL level. This justifies the development of an optimization methodology which takes effect from the behavioural specification and accompanying the synthesis process in its various stages. In this paper we propose the use of algebraic properties (commutativity, associativity and distributivity) to transform readable mathematical formulas of algorithmic specifications into mathematical formulas evaluated efficiently. This will effectively reduce the execution time of scheduling calculations and increase the possibilities of testability

PRETZEL: Opening the Black Box of Machine Learning Prediction Serving Systems

Machine Learning models are often composed of pipelines of transformations. While this design allows to efficiently execute single model components at training time, prediction serving has different requirements such as low latency, high throughput and graceful performance degradation under heavy load. Current prediction serving systems consider models as black boxes, whereby prediction-time-specific optimizations are ignored in favor of ease of deployment. In this paper, we present PRETZEL, a prediction serving system introducing a novel white box architecture enabling both end-to-end and multi-model optimizations. Using production-like model pipelines, our experiments show that PRETZEL is able to introduce performance improvements over different dimensions; compared to state-of-the-art approaches PRETZEL is on average able to reduce 99th percentile latency by 5.5x while reducing memory footprint by 25x, and increasing throughput by 4.7x.Comment: 16 pages, 14 figures, 13th USENIX Symposium on Operating Systems Design and Implementation (OSDI), 201

A New Optimization Technique for Improving Resource Exploitation and Critical Path Minimization

This paper presents a novel approach to algebraic optimization of data-flow graphs in the domain of computationally intensive applications. The presented approach is based upon the paradigm of simulated evolution which has been proven to be a powerful method for solving large non-linear optimization problems. We introduce a genetic algorithm with a new chromosomal representation of data-flow graphs that serves as a basis for preserving the correctness of algebraic transformations and allows an efficient implementation of the genetic operators. Furthermore, we introduce a new class of hardware-related transformation rules which for the first time allow to take existing component libraries into account. The efficiency of our method is demonstrated by encouraging experimental results for several standard benchmarks

Contributions à l'optimisation de programmes et à la synthèse de circuits haut-niveau

Since the end of Dennard scaling, power efficiency is the limiting factor for large-scale computing. Hardware accelerators such as reconfigurable circuits (FPGA, CGRA) or Graphics Processing Units (GPUs) were introduced to improve the performance under a limited energy budget, resulting into complex heterogeneous platforms. This document presents a synthetic description of my research activities over the last decade on compilers for high-performance computing and high-level synthesis of circuits (HLS) for FPGA accelerators. Specifically, my contributions covers both theoretical and practical aspects of automatic parallelization and HLS in a general theoretical framework called the polyhedral model.A first chapter describes our contributions to loop tiling, a key program transformation for automatic parallelization which splits the computation atomic blocks called tiles.We rephrase loop tiling in the polyhedral model to enable any polyhedral tile shape whose size depends on a single parameter (monoparametric tiling), and we present a tiling transformation for programs with reductions – accumulations w.r.t. an associative/commutative operator. Our results open the way for semantic program transformations ; program transformations which does not preserve the computation but still lead to an equivalent program.A second chapter describes our contributions to algorithm recognition. A compiler optimization will never replace a good algorithm, hence the idea to recognize algorithm instances in a program and to substitute them by a call to a performance library. In our PhD thesis, we have addressed the recognition of templates – functionswith first-order variables – into programs and its application to program optimization. We propose a complementary algorithm recognition framework which leverages our monoparametric tiling and our reduction tiling transformations. This automates semantic tiling, a new semantic program transformation which increases the grain of operators (scalar → matrix).A third chapter presents our contributions to the synthesis of communications with an off-chip memory in the context of high-level circuit synthesis (HLS). We propose an execution model based on loop tiling, a pipelined architecture and a source-level compilation algorithm which, connected to the C2H HLS tool from Altera, ends up to a FPGA configuration with minimized data transfers. Our compilation algorithm is optimal – the data are loaded as late as possible and stored as soon as possible with a maximal reuse.A fourth chapter presents our contributions to design a unified polyhedral compilation model for high-level circuit synthesis.We present the Data-aware Process Networks (DPN), a dataflow intermediate representation which leverages the ideas developed in chapter 3 to explicit the data transfers with an off-chip memory. We propose an algorithm to compile a DPN from a sequential program, and we present our contribution to the synthesis of DPN to a circuit. In particular, we present our algorithms to compile the control, the channels and the synchronizations of a DPN. These results are used in the production compiler of the Xtremlogic start-up.Depuis la fin du Dennard scaling, l’efficacité énergétique est le facteur limitant pour le calcul haute performance. Les accélérateurs matériels comme les circuits reconfigurables (FPGA, CGRA) ou les accélérateurs graphiques (GPUs) ont été introduits pour améliorer les performances sous un budget énergétique limité, menant à des plateformes hétérogènes complexes.Mes travaux de recherche portent sur les compilateurs et la synthèse de circuits haut-niveau (High-Level Synthesis, HLS) pour le calcul haute-performance. Specifiquement, mes contributions couvrent les aspects théoriques etpratiques de la parallélisation automatique et la HLS dans le cadre général du modèle polyédrique.Un premier chapitre décrit mes contributions au tuilage de boucles, une transformation fondamentale pour la parallélisation automatique, qui découpe le calcul en sous-calculs atomiques appelés tuiles. Nous reformulons le tuilage de boucles dans le modèle polyédrique pour permettre n’importe tuile polytopique dont la taille dépend d’un facteur homothétique (tuilage monoparamétrique), et nous décrivons une transformation de tuilage pour des programmes avec des réductions – une accumulation selon un opérateur associative et commutatif. Nos résultats ouvrent la voie à des transformations de programme sémantiques ; qui ne préservent pas le calcul, mais produisent un programme équivalent.Un second chapitre décrit mes contributions à la reconnaissance d’algorithmes. Une optimisation de compilateur ne remplacera jamais un bon algorithme, d’où l’idée de reconnaître les instances d’un algorithme dans un programme et de les substituer par un appel vers une bibliothèque hauteperformance, chaque fois que c’est possible et utile.Dans notre thèse, nous avons traité la reconnaissance de templates – des fonctions avec des variables d’ordre 1 – dans un programme et son application à l’optimisation de programes. Nous proposons une approche complémentaire qui s’appuie sur notre tuilage monoparamétrique complété par une transformation pour tuiler les réductions. Ceci automatise le tuilage sémantique, une nouvelle transformation sémantique qui augmente le grain des opérateurs (scalaire → matrice).Un troisième chapitre présente mes contributions à la synthèse des communications avec une mémoire off-chip dans le contexte de la synthèse de circuits haut-niveau. Nous proposons un modèle d’exécution basé sur le tuilage de boucles, une architecture pipelinée et un algorithme de compilation source-à-source qui, connecté à l’outil de HLS C2H d’Altera, produit une configuration de circuit FPGA qui réalise un volume minimal de transferts de données. Notre algorithme est optimal – les données sont chargées le plus tard possible et stockées le plus tôt possible, avec une réutilisation maximale et sans redondances.Enfin, un quatrième chapitre présente mes contributions pour construire un modèle de compilation polyédrique unifié pour la synthèse de circuits haut-niveau.Nous présentons les réseaux de processus DPN (Data-aware Process Networks), une représentation intermédiaire dataflow qui s’appuie sur les idées développées au chapitre 3 pour expliciter les transferts de données entre le circuit et la mémoire off-chip. Nous proposons une suite d’algorithmes pour compiler un DPN à partir d’un programme séquentiel et nous présentons nos contributions à la synthèse d’un DPN en circuit. En particulier, nous présentons nos algorithmes pour compiler le contrôle, les canaux et les synchronisations d’un DPN. Ces résultats sont utilisés dans le compilateur de production de la start-up XtremLogic

Partial aggregation for collective communication in distributed memory machines

High Performance Computing (HPC) systems interconnect a large number of Processing Elements (PEs) in high-bandwidth networks to simulate complex scientific problems. The increasing scale of HPC systems poses great challenges on algorithm designers. As the average distance between PEs increases, data movement across hierarchical memory subsystems introduces high latency. Minimizing latency is particularly challenging in collective communications, where many PEs may interact in complex communication patterns. Although collective communications can be optimized for network-level parallelism, occasional synchronization delays due to dependencies in the communication pattern degrade application performance. To reduce the performance impact of communication and synchronization costs, parallel algorithms are designed with sophisticated latency hiding techniques. The principle is to interleave computation with asynchronous communication, which increases the overall occupancy of compute cores. However, collective communication primitives abstract parallelism which limits the integration of latency hiding techniques. Approaches to work around these limitations either modify the algorithmic structure of application codes, or replace collective primitives with verbose low-level communication calls. While these approaches give fine-grained control for latency hiding, implementing collective communication algorithms is challenging and requires expertise knowledge about HPC network topologies. A collective communication pattern is commonly described as a Directed Acyclic Graph (DAG) where a set of PEs, represented as vertices, resolve data dependencies through communication along the edges. Our approach improves latency hiding in collective communication through partial aggregation. Based on mathematical rules of binary operations and homomorphism, we expose data parallelism in a respective DAG to overlap computation with communication. The proposed concepts are implemented and evaluated with a subset of collective primitives in the Message Passing Interface (MPI), an established communication standard in scientific computing. An experimental analysis with communication-bound microbenchmarks shows considerable performance benefits for the evaluated collective primitives. A detailed case study with a large-scale distributed sort algorithm demonstrates, how partial aggregation significantly improves performance in data-intensive scenarios. Besides better latency hiding capabilities with collective communication primitives, our approach enables further optimizations of their implementations within MPI libraries. The vast amount of asynchronous programming models, which are actively studied in the HPC community, benefit from partial aggregation in collective communication patterns. Future work can utilize partial aggregation to improve the interaction of MPI collectives with acclerator architectures, and to design more efficient communication algorithms

Thrill: High-performance algorithmic distributed batch data processing with C++

We present the design and a first performance evaluation of Thrill -- a prototype of a general purpose big data processing framework with a convenient data-flow style programming interface. Thrill is somewhat similar to Apache Spark and Apache Flink with at least two main differences. First, Thrill is based on C++ which enables performance advantages due to direct native code compilation, a more cache-friendly memory layout, and explicit memory management. In particular, Thrill uses template meta-programming to compile chains of subsequent local operations into a single binary routine without intermediate buffering and with minimal indirections. Second, Thrill uses arrays rather than multisets as its primary data structure which enables additional operations like sorting, prefix sums, window scans, or combining corresponding fields of several arrays (zipping). We compare Thrill with Apache Spark and Apache Flink using five kernels from the HiBench suite. Thrill is consistently faster and often several times faster than the other frameworks. At the same time, the source codes have a similar level of simplicity and abstractio

Runtime-assisted optimizations in the on-chip memory hierarchy

Following Moore's Law, the number of transistors on chip has been increasing exponentially, which has led to the increasing complexity of modern processors. As a result, the efficient programming of such systems has become more difficult. Many programming models have been developed to answer this issue. Of particular interest are task-based programming models that employ simple annotations to define parallel work in an application. The information available at the level of the runtime systems associated with these programming models offers great potential for improving hardware design. Moreover, due to technological limitations, Moore's Law is predicted to eventually come to an end, so novel paradigms are necessary to maintain the current performance improvement trends. The main goal of this thesis is to exploit the knowledge about a parallel application available at the runtime system level to improve the design of the on-chip memory hierarchy. The coupling of the runtime system and the microprocessor enables a better hardware design without hurting the programmability. The first contribution is a set of insertion policies for shared last-level caches that exploit information about tasks and task data dependencies. The intuition behind this proposal revolves around the observation that parallel threads exhibit different memory access patterns. Even within the same thread, accesses to different variables often follow distinct patterns. The proposed policies insert cache lines into different logical positions depending on the dependency type and task type to which the corresponding memory request belongs. The second proposal optimizes the execution of reductions, defined as a programming pattern that combines input data to form the resulting reduction variable. This is achieved with a runtime-assisted technique for performing reductions in the processor's cache hierarchy. The proposal's goal is to be a universally applicable solution regardless of the reduction variable type, size and access pattern. On the software level, the programming model is extended to let a programmer specify the reduction variables for tasks, as well as the desired cache level where a certain reduction will be performed. The source-to-source compiler and the runtime system are extended to translate and forward this information to the underlying hardware. On the hardware level, private and shared caches are equipped with functional units and the accompanying logic to perform reductions at the cache level. This design avoids unnecessary data movements to the core and back as the data is operated at the place where it resides. The third contribution is a runtime-assisted prioritization scheme for memory requests inside the on-chip memory hierarchy. The proposal is based on the notion of a critical path in the context of parallel codes and a known fact that accelerating critical tasks reduces the execution time of the whole application. In the context of this work, task criticality is observed at a level of a task type as it enables simple annotation by the programmer. The acceleration of critical tasks is achieved by the prioritization of corresponding memory requests in the microprocessor.Siguiendo la ley de Moore, el número de transistores en los chips ha crecido exponencialmente, lo que ha comportado una mayor complejidad en los procesadores modernos y, como resultado, de la dificultad de la programación eficiente de estos sistemas. Se han desarrollado muchos modelos de programación para resolver este problema; un ejemplo particular son los modelos de programación basados en tareas, que emplean anotaciones sencillas para definir los Trabajos paralelos de una aplicación. La información de que disponen los sistemas en tiempo de ejecución (runtime systems) asociada con estos modelos de programación ofrece un enorme potencial para la mejora del diseño del hardware. Por otro lado, las limitaciones tecnológicas hacen que la ley de Moore pueda dejar de cumplirse próximamente, por lo que se necesitan paradigmas nuevos para mantener las tendencias actuales de mejora de rendimiento. El objetivo principal de esta tesis es aprovechar el conocimiento de las aplicaciones paral·leles de que dispone el runtime system para mejorar el diseño de la jerarquía de memoria del chip. El acoplamiento del runtime system junto con el microprocesador permite realizar mejores diseños hardware sin afectar Negativamente en la programabilidad de dichos sistemas. La primera contribución de esta tesis consiste en un conjunto de políticas de inserción para las memorias caché compartidas de último nivel que aprovecha la información de las tareas y las dependencias de datos entre estas. La intuición tras esta propuesta se basa en la observación de que los hilos de ejecución paralelos muestran distintos patrones de acceso a memoria e, incluso dentro del mismo hilo, los accesos a diferentes variables a menudo siguen patrones distintos. Las políticas que se proponen insertan líneas de caché en posiciones lógicas diferentes en función de los tipos de dependencia y tarea a los que corresponde la petición de memoria. La segunda propuesta optimiza la ejecución de las reducciones, que se definen como un patrón de programación que combina datos de entrada para conseguir la variable de reducción como resultado. Esto se consigue mediante una técnica asistida por el runtime system para la realización de reducciones en la jerarquía de la caché del procesador, con el objetivo de ser una solución aplicable de forma universal sin depender del tipo de la variable de la reducción, su tamaño o el patrón de acceso. A nivel de software, el modelo de programación se extiende para que el programador especifique las variables de reducción de las tareas, así como el nivel de caché escogido para que se realice una determinada reducción. El compilador fuente a Fuente (compilador source-to-source) y el runtime ssytem se modifican para que traduzcan y pasen esta información al hardware subyacente, evitando así movimientos de datos innecesarios hacia y desde el núcleo del procesador, al realizarse la operación donde se encuentran los datos de la misma. La tercera contribución proporciona un esquema de priorización asistido por el runtime system para peticiones de memoria dentro de la jerarquía de memoria del chip. La propuesta se basa en la noción de camino crítico en el contexto de los códigos paralelos y en el hecho conocido de que acelerar tareas críticas reduce el tiempo de ejecución de la aplicación completa. En el contexto de este trabajo, la criticidad de las tareas se considera a nivel del tipo de tarea ya que permite que el programador las indique mediante anotaciones sencillas. La aceleración de las tareas críticas se consigue priorizando las correspondientes peticiones de memoria en el microprocesador.Seguint la llei de Moore, el nombre de transistors que contenen els xips ha patit un creixement exponencial, fet que ha provocat un augment de la complexitat dels processadors moderns i, per tant, de la dificultat de la programació eficient d’aquests sistemes. Per intentar solucionar-ho, s’han desenvolupat diversos models de programació; un exemple particular en són els models basats en tasques, que fan servir anotacions senzilles per definir treballs paral·lels dins d’una aplicació. La informació que hi ha al nivell dels sistemes en temps d’execució (runtime systems) associada amb aquests models de programació ofereix un gran potencial a l’hora de millorar el disseny del maquinari. D’altra banda, les limitacions tecnològiques fan que la llei de Moore pugui deixar de complir-se properament, per la qual cosa calen nous paradigmes per mantenir les tendències actuals en la millora de rendiment. L’objectiu principal d’aquesta tesi és aprofitar els coneixements que el runtime System té d’una aplicació paral·lela per millorar el disseny de la jerarquia de memòria dins el xip. L’acoblament del runtime system i el microprocessador permet millorar el disseny del maquinari sense malmetre la programabilitat d’aquests sistemes. La primera contribució d’aquesta tesi consisteix en un conjunt de polítiques d’inserció a les memòries cau (cache memories) compartides d’últim nivell que aprofita informació sobre tasques i les dependències de dades entre aquestes. La intuïció que hi ha al darrere d’aquesta proposta es basa en el fet que els fils d’execució paral·lels mostren diferents patrons d’accés a la memòria; fins i tot dins el mateix fil, els accessos a variables diferents sovint segueixen patrons diferents. Les polítiques que s’hi proposen insereixen línies de la memòria cau a diferents ubicacions lògiques en funció dels tipus de dependència i de tasca als quals correspon la petició de memòria. La segona proposta optimitza l’execució de les reduccions, que es defineixen com un patró de programació que combina dades d’entrada per aconseguir la variable de reducció com a resultat. Això s’aconsegueix mitjançant una tècnica assistida pel runtime system per dur a terme reduccions en la jerarquia de la memòria cau del processador, amb l’objectiu que la proposta sigui aplicable de manera universal, sense dependre del tipus de la variable a la qual es realitza la reducció, la seva mida o el patró d’accés. A nivell de programari, es realitza una extensió del model de programació per facilitar que el programador especifiqui les variables de les reduccions que usaran les tasques, així com el nivell de memòria cau desitjat on s’hauria de realitzar una certa reducció. El compilador font a font (compilador source-to-source) i el runtime system s’amplien per traduir i passar aquesta informació al maquinari subjacent. A nivell de maquinari, les memòries cau privades i compartides s’equipen amb unitats funcionals i la lògica corresponent per poder dur a terme les reduccions a la pròpia memòria cau, evitant així moviments de dades innecessaris entre el nucli del processador i la jerarquia de memòria. La tercera contribució proporciona un esquema de priorització assistit pel runtime System per peticions de memòria dins de la jerarquia de memòria del xip. La proposta es basa en la noció de camí crític en el context dels codis paral·lels i en el fet conegut que l’acceleració de les tasques que formen part del camí crític redueix el temps d’execució de l’aplicació sencera. En el context d’aquest treball, la criticitat de les tasques s’observa al nivell del seu tipus ja que permet que el programador les indiqui mitjançant anotacions senzilles. L’acceleració de les tasques crítiques s’aconsegueix prioritzant les corresponents peticions de memòria dins el microprocessador