A dynamically reconfigurable pattern matcher for regular expressions on FPGA

In this article we describe how to expand a partially dynamic reconfig- urable pattern matcher for regular expressions presented in previous work by Di- vyasree and Rajashekar [2]. The resulting, extended, pattern matcher is fully dynamically reconfigurable. First, the design is adapted for use with parameterisable configurations, a method for Dynamic Circuit Specialization. Using parameteris- able configurations allows us to achieve the same area gains as the hand crafted reconfigurable design, with the benefit that parameterisable configurations can be applied automatically. This results in a design that is more easily adaptable to spe- cific applications and allows for an easier design exploration. Additionally, the pa- rameterisable configuration implementation is also generated automatically, which greatly reduces the design overhead of using dynamic reconfiguration. Secondly, we propose a number of expansions to the original design to overcome several limitations in the original design that constrain the dynamic reconfigurability of the pattern matcher. We propose two different solutions to dynamically change the character that is matched in a certain block. The resulting pattern matcher, after these changes, is fully dynamically reconfigurable, all aspects of the implemented regular expression can be changed at run-time

Mejora de la evaluación de expresiones regulares sobre hardware reconfigurable

Since the Internet was born, the amount of data that systems process has increased in an exponential way and this is the reason because these systems need to be fast, flexible and powerful. Nowadays, communications keep increasing the speed requirements for data processing, and the FPGA‟s are ideal for this task. In data processing, a huge amount of time is dedicated to pattern matching, frequently involving regular expressions matching. As the amount of patterns to be checked grow up, so does the hardware complexity dedicated to its recognition. Thus it needs to be flexible to be able to adapt to the necessary changes with ease. In this project a VHDL code generator implemented in Java is presented. The code generated describes a regular expressions recognizer of various sets given by parameter, which will be synthetized by an FPGA. This module takes various sets of regular expressions and generates the VHDL code that describes the system which recognizes them. The code generator is flexible, due to great modularity and upgradeability that software offers. Thus, the main advantage of this model consists on the possibility of combining the flexibility of software with the speed of hardware in order to create fast and low cost recognizers in a flexible and easy way

Techniques for efficient regular expression matching across hardware architectures

Regular expression matching is a central task for many networking and bioinformatics applications. For example, network intrusion detection systems, which perform deep packet inspection to detect malicious network activities, often encode signatures of malicious traffic through regular expressions. Similarly, several bioinformatics applications perform regular expression matching to find common patterns, called motifs, across multiple gene or protein sequences. Hardware implementations of regular expression matching engines fall into two categories: memory-based and logic-based solutions. In both cases, the design aims to maximize the processing throughput and minimize the resources requirements, either in terms of memory or of logic cells. Graphical Processing Units (GPUs) offer a highly parallel platform for memory-based implementations, while Field Programmable Gate Arrays (FPGAs) support reconfigurable, logic-based solutions. In addition, Micron Technology has recently announced its Automata Processor, a memory-based, reprogrammable hardware device. From an algorithmic standpoint, regular expression matching engines are based on finite automata, either in their non-deterministic or in their deterministic form (NFA and DFA, respectively). Micron's Automata Processor is based on a proprietary Automata Network, which extends classical NFA with counters and boolean elements. In this work, we aim to implement highly parallel memory-based and logic-based regular expression matching solutions. Our contributions are summarized as follows. First, we implemented regular expression matching on GPU. In this process, we explored compression techniques and regular expression clustering algorithms to alleviate the memory pressure of DFA-based GPU implementations. Second, we developed a parser for Automata Networks defined through Micron's Automata Network Markup Language (ANML), a XML-based high-level language designed to program the Automata Processor. Specifically, our ANML parser first maps the Automata Networks to an

A fully parameterized virtual coarse grained reconfigurable array for high performance computing applications

Field Programmable Gate Arrays (FPGAs) have proven their potential in accelerating High Performance Computing (HPC) Applications. Conventionally such accelerators predominantly use, FPGAs that contain fine-grained elements such as LookUp Tables (LUTs), Switch Blocks (SB) and Connection Blocks (CB) as basic programmable logic blocks. However, the conventional implementation suffers from high reconfiguration and development costs. In order to solve this problem, programmable logic components are defined at a virtual higher abstraction level. These components are called Processing Elements (PEs) and the group of PEs along with the inter-connection network form an architecture called a Virtual Coarse-Grained Reconfigurable Array (VCGRA). The abstraction helps to reconfigure the PEs faster at the intermediate level than at the lower-level of an FPGA. Conventional VCGRA implementations (built on top of the lower levels of the FPGA) use functional resources such as LUTs to establish required connections (intra-connect) within a PE. In this paper, we propose to use the parameterized reconfiguration technique to implement the intra-connections of each PE with the aim to reduce the FPGA resource utilization (LUTs). The technique is used to parameterize the intra-connections with parameters that only change their value infrequently (whenever a new VCGRA function has to be reconfigured) and that are implemented as constants. Since the design is optimized for these constants at every moment in time, this reduces the resource utilization. Further, interconnections (network between the multiple PEs) of the VCGRA grid can also be parameterized so that both the inter- and intraconnect network of the VCGRA grid can be mapped onto the physical switch blocks of the FPGA. For every change in parameter values a specialized bitstream is generated on the fly and the FPGA is reconfigured using the parameterized run-time reconfiguration technique. Our results show a drastic reduction in FPGA LUT resource utilization in the PE by at least 30% and in the intra-network of the PE by 31% when implementing an HPC application

Boosting XML Filtering with a Scalable FPGA-based Architecture

The growing amount of XML encoded data exchanged over the Internet increases the importance of XML based publish-subscribe (pub-sub) and content based routing systems. The input in such systems typically consists of a stream of XML documents and a set of user subscriptions expressed as XML queries. The pub-sub system then filters the published documents and passes them to the subscribers. Pub-sub systems are characterized by very high input ratios, therefore the processing time is critical. In this paper we propose a "pure hardware" based solution, which utilizes XPath query blocks on FPGA to solve the filtering problem. By utilizing the high throughput that an FPGA provides for parallel processing, our approach achieves drastically better throughput than the existing software or mixed (hardware/software) architectures. The XPath queries (subscriptions) are translated to regular expressions which are then mapped to FPGA devices. By introducing stacks within the FPGA we are able to express and process a wide range of path queries very efficiently, on a scalable environment. Moreover, the fact that the parser and the filter processing are performed on the same FPGA chip, eliminates expensive communication costs (that a multi-core system would need) thus enabling very fast and efficient pipelining. Our experimental evaluation reveals more than one order of magnitude improvement compared to traditional pub/sub systems.Comment: CIDR 200