Near-Optimal Motion Planning Algorithms Via A Topological and Geometric Perspective

Motion planning is a fundamental problem in robotics, which involves finding a path for an autonomous system, such as a robot, from a given source to a destination while avoiding collisions with obstacles. The properties of the planning space heavily influence the performance of existing motion planning algorithms, which can pose significant challenges in handling complex regions, such as narrow passages or cluttered environments, even for simple objects. The problem of motion planning becomes deterministic if the details of the space are fully known, which is often difficult to achieve in constantly changing environments. Sampling-based algorithms are widely used among motion planning paradigms because they capture the topology of space into a roadmap. These planners have successfully solved high-dimensional planning problems with a probabilistic-complete guarantee, i.e., it guarantees to find a path if one exists as the number of vertices goes to infinity. Despite their progress, these methods have failed to optimize the sub-region information of the environment for reuse by other planners. This results in re-planning overhead at each execution, affecting the performance complexity for computation time and memory space usage. In this research, we address the problem by focusing on the theoretical foundation of the algorithmic approach that leverages the strengths of sampling-based motion planners and the Topological Data Analysis methods to extract intricate properties of the environment. The work contributes a novel algorithm to overcome the performance shortcomings of existing motion planners by capturing and preserving the essential topological and geometric features to generate a homotopy-equivalent roadmap of the environment. This roadmap provides a mathematically rich representation of the environment, including an approximate measure of the collision-free space. In addition, the roadmap graph vertices sampled close to the obstacles exhibit advantages when navigating through narrow passages and cluttered environments, making obstacle-avoidance path planning significantly more efficient. The application of the proposed algorithms solves motion planning problems, such as sub-optimal planning, diverse path planning, and fault-tolerant planning, by demonstrating the improvement in computational performance and path quality. Furthermore, we explore the potential of these algorithms in solving computational biology problems, particularly in finding optimal binding positions for protein-ligand or protein-protein interactions. Overall, our work contributes a new way to classify routes in higher dimensional space and shows promising results for high-dimensional robots, such as articulated linkage robots. The findings of this research provide a comprehensive solution to motion planning problems and offer a new perspective on solving computational biology problems

Using MapReduce Streaming for Distributed Life Simulation on the Cloud

Distributed software simulations are indispensable in the study of large-scale life models but often require the use of technically complex lower-level distributed computing frameworks, such as MPI. We propose to overcome the complexity challenge by applying the emerging MapReduce (MR) model to distributed life simulations and by running such simulations on the cloud. Technically, we design optimized MR streaming algorithms for discrete and continuous versions of Conway’s life according to a general MR streaming pattern. We chose life because it is simple enough as a testbed for MR’s applicability to a-life simulations and general enough to make our results applicable to various lattice-based a-life models. We implement and empirically evaluate our algorithms’ performance on Amazon’s Elastic MR cloud. Our experiments demonstrate that a single MR optimization technique called strip partitioning can reduce the execution time of continuous life simulations by 64%. To the best of our knowledge, we are the first to propose and evaluate MR streaming algorithms for lattice-based simulations. Our algorithms can serve as prototypes in the development of novel MR simulation algorithms for large-scale lattice-based a-life models.https://digitalcommons.chapman.edu/scs_books/1014/thumbnail.jp

Hypersweeps, Convective Clouds and Reeb Spaces

Isosurfaces are one of the most prominent tools in scientific data visualisation. An isosurface is a surface that defines the boundary of a feature of interest in space for a given threshold. This is integral in analysing data from the physical sciences which observe and simulate three or four dimensional phenomena. However it is time consuming and impractical to discover surfaces of interest by manually selecting different thresholds. The systematic way to discover significant isosurfaces in data is with a topological data structure called the contour tree. The contour tree encodes the connectivity and shape of each isosurface at all possible thresholds. The first part of this work has been devoted to developing algorithms that use the contour tree to discover significant features in data using high performance computing systems. Those algorithms provided a clear speedup over previous methods and were used to visualise physical plasma simulations. A major limitation of isosurfaces and contour trees is that they are only applicable when a single property is associated with data points. However scientific data sets often take multiple properties into account. A recent breakthrough generalised isosurfaces to fiber surfaces. Fiber surfaces define the boundary of a feature where the threshold is defined in terms of multiple parameters, instead of just one. In this work we used fiber surfaces together with isosurfaces and the contour tree to create a novel application that helps atmosphere scientists visualise convective cloud formation. Using this application, they were able to, for the first time, visualise the physical properties of certain structures that trigger cloud formation. Contour trees can also be generalised to handle multiple parameters. The natural extension of the contour tree is called the Reeb space and it comes from the pure mathematical field of fiber topology. The Reeb space is not yet fully understood mathematically and algorithms for computing it have significant practical limitations. A key difficulty is that while the contour tree is a traditional one dimensional data structure made up of points and lines between them, the Reeb space is far more complex. The Reeb space is made up of two dimensional sheets, attached to each other in intricate ways. The last part of this work focuses on understanding the structure of Reeb spaces and the rules that are followed when sheets are combined. This theory builds towards developing robust combinatorial algorithms to compute and use Reeb spaces for practical data analysis