Ontology-Based Data Access and Integration

An ontology-based data integration (OBDI) system is an information management system consisting of three components: an ontology, a set of data sources, and the mapping between the two. The ontology is a conceptual, formal description of the domain of interest to a given organization (or a community of users), expressed in terms of relevant concepts, attributes of concepts, relationships between concepts, and logical assertions characterizing the domain knowledge. The data sources are the repositories accessible by the organization where data concerning the domain are stored. In the general case, such repositories are numerous, heterogeneous, each one managed and maintained independently from the others. The mapping is a precise specification of the correspondence between the data contained in the data sources and the elements of the ontology. The main purpose of an OBDI system is to allow information consumers to query the data using the elements in the ontology as predicates. In the special case where the organization manages a single data source, the term ontology-based data access (ODBA) system is used

A universal ontology-based approach to data integration

One of the main problems in building data integration systems is that of semantic integration. It has been acknowledged that the problem would not exist if all systems were developed using the same global schema, but so far, such global schema has been considered unfeasible in practice. However, in our previous work, we have argued that given the current state-of-the-art, a global schema may be feasible now, and we have put forward a vision of a Universal Ontology (UO) that may be desirable, feasible, and viable. One of the reasons why the UO may be desirable is that it might solve the semantic integration problem. The objective of this paper is to show that indeed the UO could solve, or at least greatly alleviate, the semantic integration problem. We do so by presenting an approach to semantic integration based on the UO that requires much less effort than other approaches.Peer ReviewedPostprint (published version

The Form of Organization for Small Business

Matching and integrating ontologies has been a desirable technique in areas such as data fusion, knowledge integration, the Semantic Web and the development of advanced services in distributed system. Unfortunately, the heterogeneities of ontologies cause big obstacles in the development of this technique. This licentiate thesis describes an approach to tackle the problem of ontology integration using description logics and production rules, both on a syntactic level and on a semantic level. Concepts in ontologies are matched and integrated to generate ontology intersections. Context is extracted and rules for handling heterogeneous ontology reasoning with contexts are developed. Ontologies are integrated by two processes. The first integration is to generate an ontology intersection from two OWL ontologies. The result is an ontology intersection, which is an independent ontology containing non-contradictory assertions based on the original ontologies. The second integration is carried out by rules that extract context, such as ontology content and ontology description data, e.g. time and ontology creator. The integration is designed for conceptual ontology integration. The information of instances isn't considered, neither in the integrating process nor in the integrating results. An ontology reasoner is used in the integration process for non-violation check of two OWL ontologies and a rule engine for handling conflicts according to production rules. The ontology reasoner checks the satisfiability of concepts with the help of anchors, i.e. synonyms and string-identical entities; production rules are applied to integrate ontologies, with the constraint that the original ontologies should not be violated. The second integration process is carried out with production rules with context data of the ontologies. Ontology reasoning, in a repository, is conducted within the boundary of each ontology. Nonetheless, with context rules, reasoning is carried out across ontologies. The contents of an ontology provide context for its defined entities and are extracted to provide context with the help of an ontology reasoner. Metadata of ontologies are criteria that are useful for describing ontologies. Rules using context, also called context rules, are developed and in-built in the repository. New rules can also be added. The scientific contribution of the thesis is the suggested approach applying semantic based techniques to provide a complementary method for ontology matching and integrating semantically. With the illustration of the ontology integration process and the context rules and a few manually integrated ontology results, the approach shows the potential to help to develop advanced knowledge-based services.QC 20130201</p

Ontology Pattern-Based Data Integration

Data integration is concerned with providing a unified access to data residing at multiple sources. Such a unified access is realized by having a global schema and a set of mappings between the global schema and the local schemas of each data source, which specify how user queries at the global schema can be translated into queries at the local schemas. Data sources are typically developed and maintained independently, and thus, highly heterogeneous. This causes difficulties in integration because of the lack of interoperability in the aspect of architecture, data format, as well as syntax and semantics of the data. This dissertation represents a study on how small, self-contained ontologies, called ontology design patterns, can be employed to provide semantic interoperability in a cross-repository data integration system. The idea of this so-called ontology pattern- based data integration is that a collection of ontology design patterns can act as the global schema that still contains sufficient semantics, but is also flexible and simple enough to be used by linked data providers. On the one side, this differs from existing ontology-based solutions, which are based on large, monolithic ontologies that provide very rich semantics, but enforce too restrictive ontological choices, hence are shunned by many data providers. On the other side, this also differs from the purely linked data based solutions, which do offer simplicity and flexibility in data publishing, but too little in terms of semantic interoperability. We demonstrate the feasibility of this idea through the actual development of a large scale data integration project involving seven ocean science data repositories from five institutions in the U.S. In addition, we make two contributions as part of this dissertation work, which also play crucial roles in the aforementioned data integration project. First, we develop a collection of more than a dozen ontology design patterns that capture the key notions in the ocean science occurring in the participating data repositories. These patterns contain axiomatization of the key notions and were developed with an intensive involvement from the domain experts. Modeling of the patterns was done in a systematic workflow to ensure modularity, reusability, and flexibility of the whole pattern collection. Second, we propose the so-called pattern views that allow data providers to publish their data in very simple intermediate schema and show that they can greatly assist data providers to publish their data without requiring a thorough understanding of the axiomatization of the patterns

Towards semantic software engineering environments

Software tools processing partially common set of data should share an understanding of what these data mean. Since ontologies have been used to express formally a shared understanding of information, we argue that they are a way towards Semantic SEEs. In this paper we discuss an ontology-based approach to tool integration and present ODE, an ontology-based SEE

A New role of ontologies and advanced scientific visualization in big data analytics

Accessing and contextual semantic searching structured, semi-structured and unstructured information resources and their ontology based analysis in a uniform way across text-free Big Data query implementation is a main feature of approach under discussion. To increase the semantic power of query results’ analysis the ontology based implementation of multiplatform adaptive tools of scientific visualization are demonstrated. The ontologies are used not for integration of heterogeneous resources in traditional way but for parallel analysis of recourses and its related ontologies to achieve the effect of a virtual integration

How do Ontology Mappings Change in the Life Sciences?

Mappings between related ontologies are increasingly used to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the evolution of ontology mappings has received little attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life science ontologies evolve for different match algorithms. We also evaluate which semantic ontology changes primarily affect the mappings. We further investigate alternatives to predict or estimate the degree of future mapping changes based on previous ontology and mapping transitions.Comment: Keywords: mapping evolution, ontology matching, ontology evolutio

Past, present and future of information and knowledge sharing in the construction industry: Towards semantic service-based e-construction

The paper reviews product data technology initiatives in the construction sector and provides a synthesis of related ICT industry needs. A comparison between (a) the data centric characteristics of Product Data Technology (PDT) and (b) ontology with a focus on semantics, is given, highlighting the pros and cons of each approach. The paper advocates the migration from data-centric application integration to ontology-based business process support, and proposes inter-enterprise collaboration architectures and frameworks based on semantic services, underpinned by ontology-based knowledge structures. The paper discusses the main reasons behind the low industry take up of product data technology, and proposes a preliminary roadmap for the wide industry diffusion of the proposed approach. In this respect, the paper stresses the value of adopting alliance-based modes of operation