182,484 research outputs found

    Identifiability and transportability in dynamic causal networks

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    In this paper we propose a causal analog to the purely observational Dynamic Bayesian Networks, which we call Dynamic Causal Networks. We provide a sound and complete algorithm for identification of Dynamic Causal Networks, namely, for computing the effect of an intervention or experiment, based on passive observations only, whenever possible. We note the existence of two types of confounder variables that affect in substantially different ways the identification procedures, a distinction with no analog in either Dynamic Bayesian Networks or standard causal graphs. We further propose a procedure for the transportability of causal effects in Dynamic Causal Network settings, where the result of causal experiments in a source domain may be used for the identification of causal effects in a target domain.Preprin

    Understanding the costs of urban transportation using causal inference methods

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    With urbanisation on the rise, the need to transport the population within cities in an efficient, safe and sustainable manner has increased tremendously. In serving the growing demand for urban travel, one of the key policy question for decision makers is whether to invest more in road infrastructure or in public transportation. As both of these solutions require substantial spending of public money, understanding their costs continues to be a major area of research. This thesis aims to improve our understanding of the technology underlying costs of operation of public and private modes of urban travel and provide new empirical insights using large-scale datasets and application of causal econometric modelling techniques. The thesis provides empirical and theoretical contributions to three different strands in the transportation literature. Firstly, by assessing the relative costs of a group of twenty-four metro systems across the world over the period 2004 to 2016, this thesis models the cost structure of these metros and quantifies the important external sources of cost-efficiency. The main methodological development is to control for confounding from observed and unobserved characteristics of metro operations by application of dynamic panel data methods. Secondly, the thesis provides a quantification of the travel efficiency arising from increasing the provision of road-based urban travel. A crucial pre-condition of this analysis is a reliable characterisation of the technology describing congestion in a road network. In pursuit of this goal, this study develops novel causal econometric models describing vehicular flow-density relationship, both for a highway section and for an urban network, using large-scale traffic detector data and application of non-parametric instrumental variables estimation. Our model is unique as we control for bias from unobserved confounding, for instance, differences in driving behaviour. As an important intermediate research outcome, this thesis also provides a detailed association of the economic theory underlying the link between the flow-density relationship and the corresponding production function for travel in a highway section and in an urban road network. Finally, the influence of density economies in metros is investigated further using large-scale smart card and train location data from the Mass Transit Railway network in Hong Kong. This thesis delivers novel station-based causal econometric models to understand how passenger congestion delays arise in metro networks at higher passenger densities. The model is aimed at providing metro operators with a tool to predict the likely occurrences of a problem in the network well in advance and materialise appropriate control measures to minimise the impact of delays and improve the overall system reliability. The empirical results from this thesis have important implications for appraisal of transportation investment projects.Open Acces

    Dynamic Influence Networks for Rule-based Models

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    We introduce the Dynamic Influence Network (DIN), a novel visual analytics technique for representing and analyzing rule-based models of protein-protein interaction networks. Rule-based modeling has proved instrumental in developing biological models that are concise, comprehensible, easily extensible, and that mitigate the combinatorial complexity of multi-state and multi-component biological molecules. Our technique visualizes the dynamics of these rules as they evolve over time. Using the data produced by KaSim, an open source stochastic simulator of rule-based models written in the Kappa language, DINs provide a node-link diagram that represents the influence that each rule has on the other rules. That is, rather than representing individual biological components or types, we instead represent the rules about them (as nodes) and the current influence of these rules (as links). Using our interactive DIN-Viz software tool, researchers are able to query this dynamic network to find meaningful patterns about biological processes, and to identify salient aspects of complex rule-based models. To evaluate the effectiveness of our approach, we investigate a simulation of a circadian clock model that illustrates the oscillatory behavior of the KaiC protein phosphorylation cycle.Comment: Accepted to TVCG, in pres

    Disentangling causal webs in the brain using functional Magnetic Resonance Imaging: A review of current approaches

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    In the past two decades, functional Magnetic Resonance Imaging has been used to relate neuronal network activity to cognitive processing and behaviour. Recently this approach has been augmented by algorithms that allow us to infer causal links between component populations of neuronal networks. Multiple inference procedures have been proposed to approach this research question but so far, each method has limitations when it comes to establishing whole-brain connectivity patterns. In this work, we discuss eight ways to infer causality in fMRI research: Bayesian Nets, Dynamical Causal Modelling, Granger Causality, Likelihood Ratios, LiNGAM, Patel's Tau, Structural Equation Modelling, and Transfer Entropy. We finish with formulating some recommendations for the future directions in this area

    A Conceptual Framework for the Prescriptive Causal Analysis of Construction Waste

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    An initial step towards a prescriptive theory (a set of concepts) to inform the elimination of waste on construction projects. The ultimate intention is to identify the most important types and causes of waste in construction and outline the principal causal relations between them. This is not a straightforward process: the relationships form a complex network of chains and cycles of waste. Waste is defined as the use of more resources than needed, or an unwanted output from production. A conceptual schema of Previous Production Stage > Production Waste > Effect Waste is proposed and applied to the causal analysis of two major types of waste: material waste and making do
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