Implications of non-volatile memory as primary storage for database management systems

Traditional Database Management System (DBMS) software relies on hard disks for storing relational data. Hard disks are cheap, persistent, and offer huge storage capacities. However, data retrieval latency for hard disks is extremely high. To hide this latency, DRAM is used as an intermediate storage. DRAM is significantly faster than disk, but deployed in smaller capacities due to cost and power constraints, and without the necessary persistency feature that disks have. Non-Volatile Memory (NVM) is an emerging storage class technology which promises the best of both worlds. It can offer large storage capacities, due to better scaling and cost metrics than DRAM, and is non-volatile (persistent) like hard disks. At the same time, its data retrieval time is much lower than that of hard disks and it is also byte-addressable like DRAM. In this paper, we explore the implications of employing NVM as primary storage for DBMS. In other words, we investigate the modifications necessary to be applied on a traditional relational DBMS to take advantage of NVM features. As a case study, we have modified the storage engine (SE) of PostgreSQL enabling efficient use of NVM hardware. We detail the necessary changes and challenges such modifications entail and evaluate them using a comprehensive emulation platform. Results indicate that our modified SE reduces query execution time by up to 40% and 14.4% when compared to disk and NVM storage, with average reductions of 20.5% and 4.5%, respectively.The research leading to these results has received funding from the European Union’s 7th Framework Programme under grant agreement number 318633, the Ministry of Science and Technology of Spain under contract TIN2015-65316-P, and a HiPEAC collaboration grant awarded to Naveed Ul Mustafa.Peer ReviewedPostprint (author's final draft

Memory management techniques for large-scale persistent-main-memory systems

Storage Class Memory (SCM) is a novel class of memory technologies that promise to revolutionize database architectures. SCM is byte-addressable and exhibits latencies similar to those of DRAM, while being non-volatile. Hence, SCM could replace both main memory and storage, enabling a novel single-level database architecture without the traditional I/O bottleneck. Fail-safe persistent SCM allocation can be considered conditio sine qua non for enabling this novel architecture paradigm for database management systems. In this paper we present PAllocator, a fail-safe persistent SCM allocator whose design emphasizes high concurrency and capacity scalability. Contrary to previous works, PAllocator thoroughly addresses the important challenge of persistent memory fragmentation by implementing an efficient defragmentation algorithm. We show that PAllocator outperforms state-of-the-art persistent allocators by up to one order of magnitude, both in operation throughput and recovery time, and enables up to 2.39x higher operation throughput on a persistent B-Tree

Implications of non-volatile memory as primary storage for database management systems

Traditional Database Management System (DBMS) software relies on hard disks for storing relational data. Hard disks are cheap, persistent, and offer huge storage capacities. However, data retrieval latency for hard disks is extremely high. To hide this latency, DRAM is used as an intermediate storage. DRAM is significantly faster than disk, but deployed in smaller capacities due to cost and power constraints, and without the necessary persistency feature that disks have. Non-Volatile Memory (NVM) is an emerging storage class technology which promises the best of both worlds. It can offer large storage capacities, due to better scaling and cost metrics than DRAM, and is non-volatile (persistent) like hard disks. At the same time, its data retrieval time is much lower than that of hard disks and it is also byte-addressable like DRAM. In this paper, we explore the implications of employing NVM as primary storage for DBMS. In other words, we investigate the modifications necessary to be applied on a traditional relational DBMS to take advantage of NVM features. As a case study, we have modified the storage engine (SE) of PostgreSQL enabling efficient use of NVM hardware. We detail the necessary changes and challenges such modifications entail and evaluate them using a comprehensive emulation platform. Results indicate that our modified SE reduces query execution time by up to 40% and 14.4% when compared to disk and NVM storage, with average reductions of 20.5% and 4.5%, respectively. © 2016 IEEE

RGLock: Recoverable Mutual Exclusion for Non-Volatile Main Memory Systems

Mutex locks have traditionally been the most popular concurrent programming mechanisms for inter-process synchronization in the rapidly advancing field of concurrent computing systems that support high-performance applications. However, the concept of recoverability of these algorithms in the event of a crash failure has not been studied thoroughly. Popular techniques like transaction roll-back are widely known for providing fault-tolerance in modern Database Management Systems. Whereas in the context of mutual exclusion in shared memory systems, none of the prominent lock algorithms (e.g., Lamport’s Bakery algorithm, MCS lock, etc.) are designed to tolerate crash failures, especially in operations carried out in the critical sections. Each of these algorithms may fail to maintain mutual exclusion, or sacrifice some of the liveness guarantees in presence of crash failures. Storing application data and recovery information in the primary storage with conventional volatile memory limits the development of efficient crash-recovery mechanisms since a failure on any component in the system causes a loss of program data. With the advent of Non-Volatile Main Memory technologies, opportunities have opened up to redefine the problem of Mutual Exclusion in the context of a crash-recovery model where processes may recover from crash failures and resume execution. When the main memory is non-volatile, an application’s entire state can be recovered from a crash using the in-memory state near-instantaneously, making a process’s failure appear as a suspend/resume event. This thesis proceeds to envision a solution for the problem of mutual exclusion in such systems. The goal is to provide a first-of-its-kind mutex lock that guarantees mutual exclusion and starvation freedom in emerging shared-memory architectures that incorporate non-volatile main memory (NVMM)

Leveraging Non-Volatile Memory in Modern Storage Management Architectures

Non-volatile memory technologies (NVM) introduce a novel class of devices that combine characteristics of both storage and main memory. Like storage, NVM is not only persistent, but also denser and cheaper than DRAM. Like DRAM, NVM is byte-addressable and has lower access latency. In recent years, NVM has gained a lot of attention both in academia and in the data management industry, with views ranging from skepticism to over excitement. Some critics claim that NVM is not cheap enough to replace flash-based SSDs nor is it fast enough to replace DRAM, while others see it simply as a storage device. Supporters of NVM have observed that its low latency and byte-addressability requires radical changes and a complete rewrite of storage management architectures. This thesis takes a moderate stance between these two views. We consider that, while NVM might not replace flash-based SSD or DRAM in the near future, it has the potential to reduce the gap between them. Furthermore, treating NVM as a regular storage media does not fully leverage its byte-addressability and low latency. On the other hand, completely redesigning systems to be NVM-centric is impractical. Proposals that attempt to leverage NVM to simplify storage management result in completely new architectures that face the same challenges that are already well-understood and addressed by the traditional architectures. Therefore, we take three common storage management architectures as a starting point, and propose incremental changes to enable them to better leverage NVM. First, in the context of log-structured merge-trees, we investigate the impact of storing data in NVM, and devise methods to enable small granularity accesses and NVM-aware caching policies. Second, in the context of B+Trees, we propose to extend the buffer pool and describe a technique based on the concept of optimistic consistency to handle corrupted pages in NVM. Third, we employ NVM to enable larger capacity and reduced costs in a index+log key-value store, and combine it with other techniques to build a system that achieves low tail latency. This thesis aims to describe and evaluate these techniques in order to enable storage management architectures to leverage NVM and achieve increased performance and lower costs, without major architectural changes.:1 Introduction 1.1 Non-Volatile Memory 1.2 Challenges 1.3 Non-Volatile Memory & Database Systems 1.4 Contributions and Outline 2 Background 2.1 Non-Volatile Memory 2.1.1 Types of NVM 2.1.2 Access Modes 2.1.3 Byte-addressability and Persistency 2.1.4 Performance 2.2 Related Work 2.3 Case Study: Persistent Tree Structures 2.3.1 Persistent Trees 2.3.2 Evaluation 3 Log-Structured Merge-Trees 3.1 LSM and NVM 3.2 LSM Architecture 3.2.1 LevelDB 3.3 Persistent Memory Environment 3.4 2Q Cache Policy for NVM 3.5 Evaluation 3.5.1 Write Performance 3.5.2 Read Performance 3.5.3 Mixed Workloads 3.6 Additional Case Study: RocksDB 3.6.1 Evaluation 4 B+Trees 4.1 B+Tree and NVM 4.1.1 Category #1: Buffer Extension 4.1.2 Category #2: DRAM Buffered Access 4.1.3 Category #3: Persistent Trees 4.2 Persistent Buffer Pool with Optimistic Consistency 4.2.1 Architecture and Assumptions 4.2.2 Embracing Corruption 4.3 Detecting Corruption 4.3.1 Embracing Corruption 4.4 Repairing Corruptions 4.5 Performance Evaluation and Expectations 4.5.1 Checksums Overhead 4.5.2 Runtime and Recovery 4.6 Discussion 5 Index+Log Key-Value Stores 5.1 The Case for Tail Latency 5.2 Goals and Overview 5.3 Execution Model 5.3.1 Reactive Systems and Actor Model 5.3.2 Message-Passing Communication 5.3.3 Cooperative Multitasking 5.4 Log-Structured Storage 5.5 Networking 5.6 Implementation Details 5.6.1 NVM Allocation on RStore 5.6.2 Log-Structured Storage and Indexing 5.6.3 Garbage Collection 5.6.4 Logging and Recovery 5.7 Systems Operations 5.8 Evaluation 5.8.1 Methodology 5.8.2 Environment 5.8.3 Other Systems 5.8.4 Throughput Scalability 5.8.5 Tail Latency 5.8.6 Scans 5.8.7 Memory Consumption 5.9 Related Work 6 Conclusion Bibliography A PiBenc

Persistent Buffer Management with Optimistic Consistency

Finding the best way to leverage non-volatile memory (NVM) on modern database systems is still an open problem. The answer is far from trivial since the clear boundary between memory and storage present in most systems seems to be incompatible with the intrinsic memory-storage duality of NVM. Rather than treating NVM either solely as memory or solely as storage, in this work we propose how NVM can be simultaneously used as both in the context of modern database systems. We design a persistent buffer pool on NVM, enabling pages to be directly read/written by the CPU (like memory) while recovering corrupted pages after a failure (like storage). The main benefits of our approach are an easy integration in the existing database architectures, reduced costs (by replacing DRAM with NVM), and faster peak-performance recovery

Improving the Performance and Endurance of Persistent Memory with Loose-Ordering Consistency

Persistent memory provides high-performance data persistence at main memory. Memory writes need to be performed in strict order to satisfy storage consistency requirements and enable correct recovery from system crashes. Unfortunately, adhering to such a strict order significantly degrades system performance and persistent memory endurance. This paper introduces a new mechanism, Loose-Ordering Consistency (LOC), that satisfies the ordering requirements at significantly lower performance and endurance loss. LOC consists of two key techniques. First, Eager Commit eliminates the need to perform a persistent commit record write within a transaction. We do so by ensuring that we can determine the status of all committed transactions during recovery by storing necessary metadata information statically with blocks of data written to memory. Second, Speculative Persistence relaxes the write ordering between transactions by allowing writes to be speculatively written to persistent memory. A speculative write is made visible to software only after its associated transaction commits. To enable this, our mechanism supports the tracking of committed transaction ID and multi-versioning in the CPU cache. Our evaluations show that LOC reduces the average performance overhead of memory persistence from 66.9% to 34.9% and the memory write traffic overhead from 17.1% to 3.4% on a variety of workloads.Comment: This paper has been accepted by IEEE Transactions on Parallel and Distributed System