Pearson coefficient matrix for studying the correlation of community detection scores in multi-objective evolutionary algorithm

Assessing a community detection algorithm is a difficult task due to the absence of finding a standard definition for objective functions to accurately identify the structure of communities in complex networks. Traditional methods generally consider the detecting of community structure as a single objective issue while its optimization generally leads to restrict the solution to a specific property in the community structure. In the last decade, new community detection models have been developed. These are based on multi-objective formulation for the problem, while ensuring that more than one objective (normally two) can be simultaneously optimized to generate a set of non-dominated solutions. However the issue of which objectives should be co-optimized to enhance the efficiency of the algorithm is still an open area of research. In this paper, first we generate a candidate set of partitions by saving the last population that has been generated using single objective evolutionary algorithm (SOEA) and random partitions based on the true partition for a given complex network. We investigate the features of the structure of communities which found by fifteen existing objectives that have been used in literature for discovering communities. Then, we found the correlation between any two objectives using the pearson coefficient matrix. Extensive experiments on four real networks show that some objective functions have a strong correlation and others either neutral or weak correlations

Extending optimization algorithms to complex engineering problems

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On combinatorial optimisation in analysis of protein-protein interaction and protein folding networks

Abstract: Protein-protein interaction networks and protein folding networks represent prominent research topics at the intersection of bioinformatics and network science. In this paper, we present a study of these networks from combinatorial optimisation point of view. Using a combination of classical heuristics and stochastic optimisation techniques, we were able to identify several interesting combinatorial properties of biological networks of the COSIN project. We obtained optimal or near-optimal solutions to maximum clique and chromatic number problems for these networks. We also explore patterns of both non-overlapping and overlapping cliques in these networks. Optimal or near-optimal solutions to partitioning of these networks into non-overlapping cliques and to maximum independent set problem were discovered. Maximal cliques are explored by enumerative techniques. Domination in these networks is briefly studied, too. Applications and extensions of our findings are discussed

Preventing premature convergence and proving the optimality in evolutionary algorithms

http://ea2013.inria.fr//proceedings.pdfInternational audienceEvolutionary Algorithms (EA) usually carry out an efficient exploration of the search-space, but get often trapped in local minima and do not prove the optimality of the solution. Interval-based techniques, on the other hand, yield a numerical proof of optimality of the solution. However, they may fail to converge within a reasonable time due to their inability to quickly compute a good approximation of the global minimum and their exponential complexity. The contribution of this paper is a hybrid algorithm called Charibde in which a particular EA, Differential Evolution, cooperates with a Branch and Bound algorithm endowed with interval propagation techniques. It prevents premature convergence toward local optima and outperforms both deterministic and stochastic existing approaches. We demonstrate its efficiency on a benchmark of highly multimodal problems, for which we provide previously unknown global minima and certification of optimality

Applied (Meta)-Heuristic in Intelligent Systems

Engineering and business problems are becoming increasingly difficult to solve due to the new economics triggered by big data, artificial intelligence, and the internet of things. Exact algorithms and heuristics are insufficient for solving such large and unstructured problems; instead, metaheuristic algorithms have emerged as the prevailing methods. A generic metaheuristic framework guides the course of search trajectories beyond local optimality, thus overcoming the limitations of traditional computation methods. The application of modern metaheuristics ranges from unmanned aerial and ground surface vehicles, unmanned factories, resource-constrained production, and humanoids to green logistics, renewable energy, circular economy, agricultural technology, environmental protection, finance technology, and the entertainment industry. This Special Issue presents high-quality papers proposing modern metaheuristics in intelligent systems

Advances in Evolutionary Algorithms

With the recent trends towards massive data sets and significant computational power, combined with evolutionary algorithmic advances evolutionary computation is becoming much more relevant to practice. Aim of the book is to present recent improvements, innovative ideas and concepts in a part of a huge EA field

Time-Cost-Quality Trade-off Model for Optimal Pile Type Selection Using Discrete Particle Swarm Optimization Algorithm

The cost of pile foundations is part of the super structure cost, and it became necessary to reduce this cost by studying the pile types then decision-making in the selection of the optimal pile type in terms of cost and time of production and quality .So The main objective of this study is to solve the time–cost–quality trade-off (TCQT) problem by finding an optimal pile type with the target of "minimizing" cost and time while "maximizing" quality. There are many types In the world of piles but  in this paper, the researcher proposed five pile types, one of them is not a traditional, and   developed a model for the problem and then employed particle swarm optimization (PSO) algorithm, as one of evolutionary algorithms with the help of (Mat lab software), as a tool for decision making problem about choosing the best alternative of the traded piles, and proposes a multi objective optimization model, which aims to optimize the time, cost and quality of the pile types, and assist in selecting the most appropriate pile types. The researcher selected 10 of senior engineers to conduct interviews with them.  And prepared some questions for interviews and open questionnaire. The individuals are selected from private and state sectors each one have 10 years or more experience in pile foundations work. From personal interviews and field survey the research has shown that most of the experts, engineers are not fully aware of new soft wear techniques to helps them in choosing alternatives, despite their belief in the usefulness of using modern technology and software. The Problem is multi objective optimization problem, so after running the PSO algorithm it is usual to have more than one optimal solution, for five proposed pile types, finally the researcher  evaluated and  discussed the output results and  found out that pre-high tension spun (PHC)pile type was the optimal pile type

A Comprehensive Survey on Particle Swarm Optimization Algorithm and Its Applications

Particle swarm optimization (PSO) is a heuristic global optimization method, proposed originally by Kennedy and Eberhart in 1995. It is now one of the most commonly used optimization techniques. This survey presented a comprehensive investigation of PSO. On one hand, we provided advances with PSO, including its modifications (including quantum-behaved PSO, bare-bones PSO, chaotic PSO, and fuzzy PSO), population topology (as fully connected, von Neumann, ring, star, random, etc.), hybridization (with genetic algorithm, simulated annealing, Tabu search, artificial immune system, ant colony algorithm, artificial bee colony, differential evolution, harmonic search, and biogeography-based optimization), extensions (to multiobjective, constrained, discrete, and binary optimization), theoretical analysis (parameter selection and tuning, and convergence analysis), and parallel implementation (in multicore, multiprocessor, GPU, and cloud computing forms). On the other hand, we offered a survey on applications of PSO to the following eight fields: electrical and electronic engineering, automation control systems, communication theory, operations research, mechanical engineering, fuel and energy, medicine, chemistry, and biology. It is hoped that this survey would be beneficial for the researchers studying PSO algorithms

Community mining using three closely joint techniques based on community mutual membership and refinement strategy

Community structure has become one of the central studies of the topological structure of complex networks in the past decades. Although many advanced approaches have been proposed to identify community structure, those state-of-the-art methods still lack efficiency in terms of a balance between stability, accuracy and computation time. Here, we propose an algorithm with different stages, called TJA-net, to efficiently identify communities in a large network with a good balance between accuracy, stability and computation time. First, we propose an initial labeling algorithm, called ILPA, combining K-nearest neighbor (KNN) and label propagation algorithm (LPA). To produce a number of sub-communities automatically, ILPA iteratively labels a node in a network using the labels of its adjacent nodes and their index of closeness. Next, we merge sub-communities using the mutual membership of two communities. Finally, a refinement strategy is designed for modifying the label of the wrongly clustered nodes at boundaries. In our approach, we propose and use modularity density as the objective function rather than the commonly used modularity. This can deal with the issue of the resolution limit for different network structures enhancing the result precision. We present a series of experiments with artificial and real data set and compare the results obtained by our proposed algorithm with the ones obtained by the state-of-the-art algorithms, which shows the effectiveness of our proposed approach. The experimental results on large-scale artificial networks and real networks illustrate the superiority of our algorithm