A Model of Electrodiffusion and Osmotic Water Flow and its Energetic Structure

We introduce a model for ionic electrodiffusion and osmotic water flow through cells and tissues. The model consists of a system of partial differential equations for ionic concentration and fluid flow with interface conditions at deforming membrane boundaries. The model satisfies a natural energy equality, in which the sum of the entropic, elastic and electrostatic free energies are dissipated through viscous, electrodiffusive and osmotic flows. We discuss limiting models when certain dimensionless parameters are small. Finally, we develop a numerical scheme for the one-dimensional case and present some simple applications of our model to cell volume control

Effective governing equations for poroelastic growing media

A new mathematical model is developed for the macroscopic behaviour of a porous, linear elastic solid, saturated with a slowly flowing incompressible, viscous fluid, with surface accretion of the solid phase. The derivation uses a formal two-scale asymptotic expansion to exploit the well-separated length scales of the material: the pores are small compared to the macroscale, with a spatially periodic microstructure. Surface accretion occurs at the interface between the solid and fluid phases, resulting in growth of the solid phase through mass exchange from the fluid at a prescribed rate (and vice versa). The averaging derives a new poroelastic model, which reduces to the classical result of Burridge and Keller in the limit of no growth. The new model is of relevance to a large range of applications including packed snow, tissue growth, biofilms and subsurface rocks or soils

Numerical modelling of multi-phase multi-component reactive transport in the Earth's interior

This is a pre-copyedited, author-produced PDF of an article accepted for publication in Geophysical journal international following peer review. The version of record Oliveira, B., Afonso, J., Zlotnik, S., Diez, P. Numerical modelling of multi-phase multi-component reactive transport in the Earth's interior. "Geophysical journal international", 1 Gener 2018, vol. 212, núm. 1, p. 345-388 is available online at: https://doi.org/10.1093/gji/ggx399.We present a conceptual and numerical approach to model processes in the Earth's interior that involve multiple phases that simultaneously interact thermally, mechanically and chemically. The approach is truly multiphase in the sense that each dynamic phase is explicitly modelled with an individual set of mass, momentum, energy and chemical mass balance equations coupled via interfacial interaction terms. It is also truly multi-component in the sense that the compositions of the system and its constituent thermodynamic phases are expressed by a full set of fundamental chemical components (e.g. SiO$_2$, Al$_2$O$_3$, MgO, etc) rather than proxies. In contrast to previous approaches these chemical components evolve, react with, and partition into, different phases with different physical properties according to an internally-consistent thermodynamic model. This enables a thermodynamically-consistent coupling of the governing set of balance equations. Interfacial processes such as surface tensions and/or surface energy contributions to the dynamics and energetics of the system are also taken into account. The model presented here describes the evolution of systems governed by Multi-Phase Multi-Component Reactive Transport (MPMCRT) based on Ensemble Averaging and Classical Irreversible Thermodynamics principles. This novel approach provides a flexible platform to study the dynamics and non-linear feedbacks occurring within various natural systems at different scales. This notably includes major-and trace-element transport, diffusion-controlled trace-element re-equilibration or rheological changes associated with melt generation and migration in the Earth's mantle.Peer ReviewedPostprint (author's final draft

Thermophysical Phenomena in Metal Additive Manufacturing by Selective Laser Melting: Fundamentals, Modeling, Simulation and Experimentation

Among the many additive manufacturing (AM) processes for metallic materials, selective laser melting (SLM) is arguably the most versatile in terms of its potential to realize complex geometries along with tailored microstructure. However, the complexity of the SLM process, and the need for predictive relation of powder and process parameters to the part properties, demands further development of computational and experimental methods. This review addresses the fundamental physical phenomena of SLM, with a special emphasis on the associated thermal behavior. Simulation and experimental methods are discussed according to three primary categories. First, macroscopic approaches aim to answer questions at the component level and consider for example the determination of residual stresses or dimensional distortion effects prevalent in SLM. Second, mesoscopic approaches focus on the detection of defects such as excessive surface roughness, residual porosity or inclusions that occur at the mesoscopic length scale of individual powder particles. Third, microscopic approaches investigate the metallurgical microstructure evolution resulting from the high temperature gradients and extreme heating and cooling rates induced by the SLM process. Consideration of physical phenomena on all of these three length scales is mandatory to establish the understanding needed to realize high part quality in many applications, and to fully exploit the potential of SLM and related metal AM processes

A trajectory mechanics approach for the study of wave propagation in an anisotropic elastic medium

We derive equations describing the path and traveltime of a coherent elastic wave propagating in an anisotropic medium, generalizing expressions from conventional high-frequency asymptotic ray theory. The methodology is valid across a broad range of frequencies and allows for subwavelength variations in the material properties of the medium. The primary difference from current ray methods is the retention of a term that is neglected in the derivation of the eikonal equation. The additional term contains spatial derivatives of the properties of the medium and of the amplitude field, and its presence couples the equations governing the evolution of the amplitude and phase along the trajectory. The magnitude of this term provides a measure of the validity of expressions based upon high-frequency asymptotic methods, such as the eikonal equation, when modelling wave propagation dominated by a band of frequencies. In calculations involving a layer with gradational boundaries, we find that asymptotic estimates do deviate from those of our frequency-dependent approach when the width of the layer boundaries become sufficiently narrow. For example, for a layer with boundaries that vary over tens of meters, the term neglected by a high-frequency asymptotic approximation is significant for frequencies around 10 Hz. The visible differences in the paths of the rays that traverse the layer substantiate this conclusion. For a velocity model derived from an observed well log, the majority of the trajectories calculated using the extended approach, accounting for the frequency-dependence of the rays, are noticeably different from those produced by the eikonal equation. A suite of paths from a source to a specified receiver, calculated for a range of frequencies between 10 and 100 Hz, define a region of sensitivity to velocity variations and may be used for an augmented form of tomographic imaging